RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 HINT3Q9NQE9 182 aaKnown RBP11.2□□□□□ -0.62
LTBR-208ENST00000541005 COMMD3-BMI1R4GMX3 469 aa11.2□□□□□ -0.62
LTBR-208ENST00000541005 WNK2Q9Y3S1 2297 aa11.2□□□□□ -0.62
LTBR-208ENST00000541005 JMJD1CQ15652 2540 aa11.19□□□□□ -0.62
LTBR-208ENST00000541005 CIB2O75838 187 aa11.19□□□□□ -0.62
LTBR-208ENST00000541005 NCR1O76036 304 aa11.19□□□□□ -0.62
LTBR-208ENST00000541005 HLA-DQA2P01906 255 aa11.19□□□□□ -0.62
LTBR-208ENST00000541005 MT-ND5P03915 603 aa11.19□□□□□ -0.62
LTBR-208ENST00000541005 USF1P22415 310 aaPredicted RBP11.19□□□□□ -0.62
LTBR-208ENST00000541005 PRKACGP22612 351 aa11.19□□□□□ -0.62
LTBR-208ENST00000541005 FASP25445 335 aa11.19□□□□□ -0.62
LTBR-208ENST00000541005 GCH1P30793 250 aa11.19□□□□□ -0.62
LTBR-208ENST00000541005 LIPAP38571 399 aa11.19□□□□□ -0.62
LTBR-208ENST00000541005 MMP15P51511 669 aa11.19□□□□□ -0.62
LTBR-208ENST00000541005 BLVRAP53004 296 aa11.19□□□□□ -0.62
LTBR-208ENST00000541005 CDK5Q00535 292 aa11.19□□□□□ -0.62
LTBR-208ENST00000541005 RIN1Q13671 783 aa11.19□□□□□ -0.62
LTBR-208ENST00000541005 RSPO1Q2MKA7 263 aaPredicted RBP11.19□□□□□ -0.62
LTBR-208ENST00000541005 TEX30Q5JUR7 227 aa11.19□□□□□ -0.62
LTBR-208ENST00000541005 SPATA46Q5T0L3 261 aa11.19□□□□□ -0.62
LTBR-208ENST00000541005 LINC01590Q5TEZ4 76 aa11.19□□□□□ -0.62
LTBR-208ENST00000541005 COLCA1Q6ZS62 124 aa11.19□□□□□ -0.62
LTBR-208ENST00000541005 CCDC121Q6ZUS5 278 aa11.19□□□□□ -0.62
LTBR-208ENST00000541005 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.19□□□□□ -0.62
LTBR-208ENST00000541005 LINC00346Q8IVM7 164 aa11.19□□□□□ -0.62
LTBR-208ENST00000541005 ATG16L2Q8NAA4 619 aa11.19□□□□□ -0.62
LTBR-208ENST00000541005 MAPK1IP1LQ8NDC0 245 aa11.19□□□□□ -0.62
LTBR-208ENST00000541005 OR5K1Q8NHB7 308 aa11.19□□□□□ -0.62
LTBR-208ENST00000541005 SLC7A6Q92536 515 aa11.19□□□□□ -0.62
LTBR-208ENST00000541005 MAP6Q96JE9 813 aa11.19□□□□□ -0.62
LTBR-208ENST00000541005 GABARAPL1Q9H0R8 117 aa11.19□□□□□ -0.62
LTBR-208ENST00000541005 CYSLTR2Q9NS75 346 aa11.19□□□□□ -0.62
LTBR-208ENST00000541005 DDX28Q9NUL7 540 aaKnown RBP11.19□□□□□ -0.62
LTBR-208ENST00000541005 AP4S1Q9Y587 144 aa11.19□□□□□ -0.62
LTBR-208ENST00000541005 DOCK11Q5JSL3 2073 aa11.19□□□□□ -0.62
LTBR-208ENST00000541005 CD5LO43866 347 aa11.18□□□□□ -0.62
LTBR-208ENST00000541005 HPXP02790 462 aa11.18□□□□□ -0.62
LTBR-208ENST00000541005 DBHP09172 617 aa11.18□□□□□ -0.62
LTBR-208ENST00000541005 CLUP10909 449 aa11.18□□□□□ -0.62
LTBR-208ENST00000541005 PSKH1P11801 424 aa11.18□□□□□ -0.62
LTBR-208ENST00000541005 ZNF823P16415 610 aa11.18□□□□□ -0.62
LTBR-208ENST00000541005 KITLGP21583 273 aa11.18□□□□□ -0.62
LTBR-208ENST00000541005 FMO3P31513 532 aa11.18□□□□□ -0.62
LTBR-208ENST00000541005 OTX1P32242 354 aaPredicted RBP11.18□□□□□ -0.62
LTBR-208ENST00000541005 ENTPD1P49961 510 aa11.18□□□□□ -0.62
LTBR-208ENST00000541005 GINS1Q14691 196 aa11.18□□□□□ -0.62
LTBR-208ENST00000541005 TMEM249Q2WGJ8 235 aa11.18□□□□□ -0.62
LTBR-208ENST00000541005 ZMAT1Q5H9K5 638 aa11.18□□□□□ -0.62
LTBR-208ENST00000541005 FAM209AQ5JX71 171 aa11.18□□□□□ -0.62
LTBR-208ENST00000541005 ACSM5Q6NUN0 579 aa11.18□□□□□ -0.62
LTBR-208ENST00000541005 TMEM154Q6P9G4 183 aa11.18□□□□□ -0.62
LTBR-208ENST00000541005 LYPD4Q6UWN0 246 aa11.18□□□□□ -0.62
LTBR-208ENST00000541005 HIPK1Q86Z02 1210 aa11.18□□□□□ -0.62
LTBR-208ENST00000541005 OR51L1Q8NGJ5 315 aa11.18□□□□□ -0.62
LTBR-208ENST00000541005 OR2AJ1Q8NGZ0 328 aa11.18□□□□□ -0.62
LTBR-208ENST00000541005 RDH5Q92781 318 aa11.18□□□□□ -0.62
LTBR-208ENST00000541005 APOBEC3DQ96AK3 386 aaPredicted RBP11.18□□□□□ -0.62
LTBR-208ENST00000541005 PITX2Q99697 317 aa11.18□□□□□ -0.62
LTBR-208ENST00000541005 ATF6BQ99941 703 aa11.18□□□□□ -0.62
LTBR-208ENST00000541005 CDADC1Q9BWV3 514 aa11.18□□□□□ -0.62
LTBR-208ENST00000541005 BPESC1Q9GZL8 116 aa11.18□□□□□ -0.62
LTBR-208ENST00000541005 POFUT1Q9H488 388 aa11.18□□□□□ -0.62
LTBR-208ENST00000541005 MARCH7Q9H992 704 aa11.18□□□□□ -0.62
LTBR-208ENST00000541005 CHODLQ9H9P2 273 aa11.18□□□□□ -0.62
LTBR-208ENST00000541005 PAPOLBQ9NRJ5 636 aaKnown RBP11.18□□□□□ -0.62
LTBR-208ENST00000541005 GRIP1Q9Y3R0 1128 aa11.18□□□□□ -0.62
LTBR-208ENST00000541005 TVP23AA6NH52 213 aa11.17□□□□□ -0.62
LTBR-208ENST00000541005 ZSCAN5BA6NJL1 495 aa11.17□□□□□ -0.62
LTBR-208ENST00000541005 EBAG9O00559 213 aa11.17□□□□□ -0.62
LTBR-208ENST00000541005 SURF4O15260 269 aa11.17□□□□□ -0.62
LTBR-208ENST00000541005 RP2O75695 350 aa11.17□□□□□ -0.62
LTBR-208ENST00000541005 HMGN1P05114 100 aa11.17□□□□□ -0.62
LTBR-208ENST00000541005 GYPBP06028 91 aa11.17□□□□□ -0.62
LTBR-208ENST00000541005 TACSTD2P09758 323 aa11.17□□□□□ -0.62
LTBR-208ENST00000541005 ACSM4P0C7M7 580 aa11.17□□□□□ -0.62
LTBR-208ENST00000541005 RAC2P15153 192 aa11.17□□□□□ -0.62
LTBR-208ENST00000541005 PAICSP22234 425 aaKnown RBP11.17□□□□□ -0.62
LTBR-208ENST00000541005 ACHEP22303 614 aa11.17□□□□□ -0.62
LTBR-208ENST00000541005 POU1F1P28069 291 aa11.17□□□□□ -0.62
LTBR-208ENST00000541005 MAGEB1P43366 347 aa11.17□□□□□ -0.62
LTBR-208ENST00000541005 DAPP51397 102 aa11.17□□□□□ -0.62
LTBR-208ENST00000541005 ZNF81P51508 661 aa11.17□□□□□ -0.62
LTBR-208ENST00000541005 ACTR3P61158 418 aa11.17□□□□□ -0.62
LTBR-208ENST00000541005 PSG7Q13046 419 aa11.17□□□□□ -0.62
LTBR-208ENST00000541005 CARTPTQ16568 116 aa11.17□□□□□ -0.62
LTBR-208ENST00000541005 ALKBH6Q3KRA9 238 aa11.17□□□□□ -0.62
LTBR-208ENST00000541005 FBXW12Q6X9E4 464 aa11.17□□□□□ -0.62
LTBR-208ENST00000541005 Q71RC1 249 aaPredicted RBP11.17□□□□□ -0.62
LTBR-208ENST00000541005 OR5L1Q8NGL2 311 aa11.17□□□□□ -0.62
LTBR-208ENST00000541005 OR10S1Q8NGN2 331 aa11.17□□□□□ -0.62
LTBR-208ENST00000541005 GTF3AQ92664 365 aaKnown RBP11.17□□□□□ -0.62
LTBR-208ENST00000541005 PTP4A1Q93096 173 aa11.17□□□□□ -0.62
LTBR-208ENST00000541005 HCAR1Q9BXC0 346 aa11.17□□□□□ -0.62
LTBR-208ENST00000541005 C1QTNF5Q9BXJ0 243 aa11.17□□□□□ -0.62
LTBR-208ENST00000541005 WDR76Q9H967 626 aa11.17□□□□□ -0.62
LTBR-208ENST00000541005 KIF17Q9P2E2 1029 aa11.17□□□□□ -0.62
LTBR-208ENST00000541005 STARD10Q9Y365 291 aa11.17□□□□□ -0.62
LTBR-208ENST00000541005 IGHV4-61A0A0C4DH41 118 aa11.16□□□□□ -0.62
LTBR-208ENST00000541005 PLSCR5A0PG75 271 aa11.16□□□□□ -0.62
LTBR-208ENST00000541005 FAM183AA6NL82 134 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms