RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 OR56B4Q8NH76 319 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 RAB3CQ96E17 227 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 CPNE2Q96FN4 548 aaPredicted RBP8.56□□□□□ -1.04
TTC39C-203ENST00000540918 MGAT4AQ9UM21 535 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 FLVCR2Q9UPI3 526 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 KLF13Q9Y2Y9 288 aaPredicted RBP8.56□□□□□ -1.04
TTC39C-203ENST00000540918 SHANK1Q9Y566 2161 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 TRGV8A0A0C4DH27 118 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 LYZL6O75951 148 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 ZNF806P0C7X5 589 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 CDK2P24941 298 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 MTNR1BP49286 362 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 SELENOPP49908 381 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 MEOX1P50221 254 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 SOX8P57073 446 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 ACTBP60709 375 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 ACTG1P63261 375 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 GUCA2AQ02747 115 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 SKP2Q13309 424 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 EDDM3AQ14507 147 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 YIF1BQ5BJH7 314 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 ZNF766Q5HY98 468 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 STPG1Q5TH74 334 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 C5orf46Q6UWT4 87 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 IDO2Q6ZQW0 420 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 MINDY2Q8NBR6 621 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 RDH5Q92781 318 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 SORCS2Q96PQ0 1159 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 ATF6BQ99941 703 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 SEC22CQ9BRL7 303 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 ADGRL4Q9HBW9 690 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 ALDOBP05062 364 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 NGFRP08138 427 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 BMP5P22003 454 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 AKR1C2P52895 323 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 PCBD1P61457 104 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 WDR38Q5JTN6 314 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 TMEM53Q6P2H8 277 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 SLC16A12Q6ZSM3 486 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 CMBLQ96DG6 245 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 SCARF2Q96GP6 870 aaPredicted RBP8.56□□□□□ -1.04
TTC39C-203ENST00000540918 CMSS1Q9BQ75 279 aaKnown RBP8.56□□□□□ -1.04
TTC39C-203ENST00000540918 BCL7BQ9BQE9 202 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 SLC19A3Q9BZV2 496 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 DNTTIP1Q9H147 329 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 ZFP64Q9NPA5 681 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 FANCFQ9NPI8 374 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 SZT2Q5T011 3432 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 SPRY1O43609 319 aaPredicted RBP8.56□□□□□ -1.04
TTC39C-203ENST00000540918 DSCR4P56555 118 aaPredicted RBP8.56□□□□□ -1.04
TTC39C-203ENST00000540918 SSPNQ14714 243 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.56□□□□□ -1.04
TTC39C-203ENST00000540918 MESTQ5EB52 335 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 SLC35D3Q5M8T2 416 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 OGFOD3Q6PK18 319 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 FIP1L1Q6UN15 594 aaKnown RBP8.56□□□□□ -1.04
TTC39C-203ENST00000540918 ATG4DQ86TL0 474 aaPredicted RBP8.56□□□□□ -1.04
TTC39C-203ENST00000540918 TPRA1Q86W33 373 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 OR2V1Q8NHB1 315 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 ZNF700Q9H0M5 742 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 GLTPQ9NZD2 209 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 ABRACLQ9P1F3 81 aa8.56□□□□□ -1.04
TTC39C-203ENST00000540918 RALGAPA1Q6GYQ0 2036 aa8.55□□□□□ -1.04
TTC39C-203ENST00000540918 TRGV5A0A0B4J1U4 118 aa8.55□□□□□ -1.04
TTC39C-203ENST00000540918 TRAPPC2LH3BP13 241 aa8.55□□□□□ -1.04
TTC39C-203ENST00000540918 K7ESF4 209 aa8.55□□□□□ -1.04
TTC39C-203ENST00000540918 SEMA7AO75326 666 aa8.55□□□□□ -1.04
TTC39C-203ENST00000540918 TFP02787 698 aa8.55□□□□□ -1.04
TTC39C-203ENST00000540918 PCMT1P22061 227 aa8.55□□□□□ -1.04
TTC39C-203ENST00000540918 CD34P28906 385 aa8.55□□□□□ -1.04
TTC39C-203ENST00000540918 IL13RA1P78552 427 aa8.55□□□□□ -1.04
TTC39C-203ENST00000540918 TPBGQ13641 420 aa8.55□□□□□ -1.04
TTC39C-203ENST00000540918 ZNF774Q6NX45 483 aa8.55□□□□□ -1.04
TTC39C-203ENST00000540918 STAC2Q6ZMT1 411 aa8.55□□□□□ -1.04
TTC39C-203ENST00000540918 BPHLQ86WA6 291 aaPredicted RBP8.55□□□□□ -1.04
TTC39C-203ENST00000540918 CMTM4Q8IZR5 234 aa8.55□□□□□ -1.04
TTC39C-203ENST00000540918 SLC7A5P1Q8MH63 180 aa8.55□□□□□ -1.04
TTC39C-203ENST00000540918 PLPP5Q8NEB5 264 aa8.55□□□□□ -1.04
TTC39C-203ENST00000540918 OR51A4Q8NGJ6 313 aa8.55□□□□□ -1.04
TTC39C-203ENST00000540918 GRPEL2Q8TAA5 225 aa8.55□□□□□ -1.04
TTC39C-203ENST00000540918 LIN37Q96GY3 246 aaPredicted RBP8.55□□□□□ -1.04
TTC39C-203ENST00000540918 PRSS27Q9BQR3 290 aa8.55□□□□□ -1.04
TTC39C-203ENST00000540918 SMIM3Q9BZL3 60 aa8.55□□□□□ -1.04
TTC39C-203ENST00000540918 PBOV1Q9GZY1 135 aa8.55□□□□□ -1.04
TTC39C-203ENST00000540918 KCNIP3Q9Y2W7 256 aa8.55□□□□□ -1.04
TTC39C-203ENST00000540918 LSM5Q9Y4Y9 91 aaKnown RBP8.55□□□□□ -1.04
TTC39C-203ENST00000540918 SLC22A23A1A5C7 686 aa8.55□□□□□ -1.04
TTC39C-203ENST00000540918 PMS2P1A4D2B8 440 aa8.55□□□□□ -1.04
TTC39C-203ENST00000540918 M0R233 179 aa8.55□□□□□ -1.04
TTC39C-203ENST00000540918 TNFRSF10AO00220 468 aa8.55□□□□□ -1.04
TTC39C-203ENST00000540918 SSX4O60224 188 aa8.55□□□□□ -1.04
TTC39C-203ENST00000540918 NPY4RP50391 375 aa8.55□□□□□ -1.04
TTC39C-203ENST00000540918 ATP1B3P54709 279 aa8.55□□□□□ -1.04
TTC39C-203ENST00000540918 EMP3P54852 163 aa8.55□□□□□ -1.04
TTC39C-203ENST00000540918 CFHR1Q03591 330 aa8.55□□□□□ -1.04
TTC39C-203ENST00000540918 THEM4Q5T1C6 240 aa8.55□□□□□ -1.04
TTC39C-203ENST00000540918 ZNF684Q5T5D7 378 aa8.55□□□□□ -1.04
TTC39C-203ENST00000540918 TSEN54Q7Z6J9 526 aaKnown RBP8.55□□□□□ -1.04
TTC39C-203ENST00000540918 ZNF454Q8N9F8 522 aa8.55□□□□□ -1.04
TTC39C-203ENST00000540918 GIMAP1Q8WWP7 306 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms