RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 GNRH1P01148 92 aa12.48□□□□□ -0.41
SCNN1A-215ENST00000540037 CLPSP04118 112 aa12.48□□□□□ -0.41
SCNN1A-215ENST00000540037 DNASE1L1P49184 302 aa12.48□□□□□ -0.41
SCNN1A-215ENST00000540037 MST1LQ2TV78 715 aa12.48□□□□□ -0.41
SCNN1A-215ENST00000540037 PTCRAQ6ISU1 281 aaPredicted RBP12.48□□□□□ -0.41
SCNN1A-215ENST00000540037 SLC29A4Q7RTT9 530 aa12.48□□□□□ -0.41
SCNN1A-215ENST00000540037 ZNF615Q8N8J6 731 aa12.48□□□□□ -0.41
SCNN1A-215ENST00000540037 METTL21AQ8WXB1 218 aa12.48□□□□□ -0.41
SCNN1A-215ENST00000540037 FBXO17Q96EF6 278 aa12.48□□□□□ -0.41
SCNN1A-215ENST00000540037 NXF5Q9H1B4 397 aaKnown RBP12.48□□□□□ -0.41
SCNN1A-215ENST00000540037 CNTD2Q9H8S5 307 aa12.48□□□□□ -0.41
SCNN1A-215ENST00000540037 MYOZ1Q9NP98 299 aaPredicted RBP12.48□□□□□ -0.41
SCNN1A-215ENST00000540037 ACKR4Q9NPB9 350 aa12.48□□□□□ -0.41
SCNN1A-215ENST00000540037 FANCFQ9NPI8 374 aa12.48□□□□□ -0.41
SCNN1A-215ENST00000540037 GDF2Q9UK05 429 aaPredicted RBP12.48□□□□□ -0.41
SCNN1A-215ENST00000540037 LOC107986453A0A1B0GWG9 222 aa12.47□□□□□ -0.41
SCNN1A-215ENST00000540037 AGPAT2O15120 278 aa12.47□□□□□ -0.41
SCNN1A-215ENST00000540037 ZNF264O43296 627 aa12.47□□□□□ -0.41
SCNN1A-215ENST00000540037 EIF3GO75821 320 aaKnown RBP eCLIP12.47□□□□□ -0.41
SCNN1A-215ENST00000540037 CRHP06850 196 aa12.47□□□□□ -0.41
SCNN1A-215ENST00000540037 CD79AP11912 226 aa12.47□□□□□ -0.41
SCNN1A-215ENST00000540037 PSMB6P28072 239 aa12.47□□□□□ -0.41
SCNN1A-215ENST00000540037 KIR2DL1P43626 348 aaPredicted RBP12.47□□□□□ -0.41
SCNN1A-215ENST00000540037 ZP2Q05996 745 aa12.47□□□□□ -0.41
SCNN1A-215ENST00000540037 GFOD2Q3B7J2 385 aa12.47□□□□□ -0.41
SCNN1A-215ENST00000540037 CATSPERDQ86XM0 798 aa12.47□□□□□ -0.41
SCNN1A-215ENST00000540037 BAP18Q8IXM2 172 aa12.47□□□□□ -0.41
SCNN1A-215ENST00000540037 SPAG16Q8N0X2 631 aa12.47□□□□□ -0.41
SCNN1A-215ENST00000540037 NUBPLQ8TB37 319 aa12.47□□□□□ -0.41
SCNN1A-215ENST00000540037 BIN3Q9NQY0 253 aa12.47□□□□□ -0.41
SCNN1A-215ENST00000540037 UQCC1Q9NVA1 299 aa12.47□□□□□ -0.41
SCNN1A-215ENST00000540037 SLC5A6Q9Y289 635 aa12.47□□□□□ -0.41
SCNN1A-215ENST00000540037 NUDT14O95848 222 aa12.47□□□□□ -0.41
SCNN1A-215ENST00000540037 CD2P06729 351 aa12.47□□□□□ -0.41
SCNN1A-215ENST00000540037 PPICP45877 212 aa12.47□□□□□ -0.41
SCNN1A-215ENST00000540037 AIMP2Q13155 320 aaKnown RBP12.47□□□□□ -0.41
SCNN1A-215ENST00000540037 UNC119Q13432 240 aa12.47□□□□□ -0.41
SCNN1A-215ENST00000540037 MYO9BQ13459 2157 aa12.47□□□□□ -0.41
SCNN1A-215ENST00000540037 MICBQ29980 383 aa12.47□□□□□ -0.41
SCNN1A-215ENST00000540037 ZNF260Q3ZCT1 412 aa12.47□□□□□ -0.41
SCNN1A-215ENST00000540037 DMRTC1Q5HYR2 192 aa12.47□□□□□ -0.41
SCNN1A-215ENST00000540037 SLC18B1Q6NT16 456 aa12.47□□□□□ -0.41
SCNN1A-215ENST00000540037 FDX2Q6P4F2 183 aa12.47□□□□□ -0.41
SCNN1A-215ENST00000540037 WDFY1Q8IWB7 410 aa12.47□□□□□ -0.41
SCNN1A-215ENST00000540037 ARHGEF39Q8N4T4 335 aa12.47□□□□□ -0.41
SCNN1A-215ENST00000540037 SFT2D1Q8WV19 159 aa12.47□□□□□ -0.41
SCNN1A-215ENST00000540037 CNTNAP3BQ96NU0 1288 aa12.47□□□□□ -0.41
SCNN1A-215ENST00000540037 SPACA5Q96QH8 159 aa12.47□□□□□ -0.41
SCNN1A-215ENST00000540037 PTGES2Q9H7Z7 377 aa12.47□□□□□ -0.41
SCNN1A-215ENST00000540037 PRSS37A4D1T9 235 aa12.46□□□□□ -0.41
SCNN1A-215ENST00000540037 P2RY10O00398 339 aa12.46□□□□□ -0.41
SCNN1A-215ENST00000540037 EIF1AYO14602 144 aaKnown RBP12.46□□□□□ -0.41
SCNN1A-215ENST00000540037 UTS2O95399 124 aa12.46□□□□□ -0.41
SCNN1A-215ENST00000540037 IL2RAP01589 272 aa12.46□□□□□ -0.41
SCNN1A-215ENST00000540037 FAM157CP0CG43 387 aa12.46□□□□□ -0.41
SCNN1A-215ENST00000540037 HLA-DOBP13765 273 aa12.46□□□□□ -0.41
SCNN1A-215ENST00000540037 ID4P47928 161 aa12.46□□□□□ -0.41
SCNN1A-215ENST00000540037 PRMT2P55345 433 aa12.46□□□□□ -0.41
SCNN1A-215ENST00000540037 BIKQ13323 160 aa12.46□□□□□ -0.41
SCNN1A-215ENST00000540037 RBMS3Q6XE24 437 aaKnown RBP12.46□□□□□ -0.41
SCNN1A-215ENST00000540037 SLC16A13Q7RTY0 426 aa12.46□□□□□ -0.41
SCNN1A-215ENST00000540037 TAF8Q7Z7C8 310 aa12.46□□□□□ -0.41
SCNN1A-215ENST00000540037 SLC37A2Q8TED4 501 aa12.46□□□□□ -0.41
SCNN1A-215ENST00000540037 AQP3Q92482 292 aa12.46□□□□□ -0.41
SCNN1A-215ENST00000540037 TWSG1Q9GZX9 223 aa12.46□□□□□ -0.41
SCNN1A-215ENST00000540037 CERS4Q9HA82 394 aa12.46□□□□□ -0.41
SCNN1A-215ENST00000540037 UBQLN4Q9NRR5 601 aa12.46□□□□□ -0.41
SCNN1A-215ENST00000540037 OR5AC2Q9NZP5 309 aa12.46□□□□□ -0.41
SCNN1A-215ENST00000540037 COA3Q9Y2R0 106 aaPredicted RBP12.46□□□□□ -0.41
SCNN1A-215ENST00000540037 SCDO00767 359 aa12.46□□□□□ -0.41
SCNN1A-215ENST00000540037 HCRTR2O43614 444 aa12.46□□□□□ -0.41
SCNN1A-215ENST00000540037 MUC1P15941 1255 aaPredicted RBP12.46□□□□□ -0.41
SCNN1A-215ENST00000540037 RIDAP52758 137 aaKnown RBP12.46□□□□□ -0.41
SCNN1A-215ENST00000540037 SNRPEP62304 92 aaKnown RBP12.46□□□□□ -0.41
SCNN1A-215ENST00000540037 ZNF117Q03924 483 aa12.46□□□□□ -0.41
SCNN1A-215ENST00000540037 EMC4Q5J8M3 183 aa12.46□□□□□ -0.41
SCNN1A-215ENST00000540037 C10orf91Q5T1B1 145 aa12.46□□□□□ -0.41
SCNN1A-215ENST00000540037 NANPQ8TBE9 248 aa12.46□□□□□ -0.41
SCNN1A-215ENST00000540037 ARL11Q969Q4 196 aa12.46□□□□□ -0.41
SCNN1A-215ENST00000540037 ZNF587Q96SQ5 575 aaPredicted RBP12.46□□□□□ -0.41
SCNN1A-215ENST00000540037 PRRT1Q99946 306 aa12.46□□□□□ -0.41
SCNN1A-215ENST00000540037 MRPS33Q9Y291 106 aaKnown RBP12.46□□□□□ -0.41
SCNN1A-215ENST00000540037 CARHSP1Q9Y2V2 147 aaKnown RBP12.46□□□□□ -0.41
SCNN1A-215ENST00000540037 IGLV1-36A0A0B4J1U3 117 aa12.46□□□□□ -0.42
SCNN1A-215ENST00000540037 LINC00587B1AMM8 73 aa12.46□□□□□ -0.42
SCNN1A-215ENST00000540037 ICOSLGO75144 302 aa12.46□□□□□ -0.42
SCNN1A-215ENST00000540037 ACAA1P09110 424 aaPredicted RBP12.46□□□□□ -0.42
SCNN1A-215ENST00000540037 RNH1P13489 461 aaKnown RBP12.46□□□□□ -0.42
SCNN1A-215ENST00000540037 TPT1P13693 172 aaKnown RBP12.46□□□□□ -0.42
SCNN1A-215ENST00000540037 FMODQ06828 376 aa12.46□□□□□ -0.42
SCNN1A-215ENST00000540037 C1orf61Q13536 156 aa12.46□□□□□ -0.42
SCNN1A-215ENST00000540037 SLC9A3R2Q15599 337 aa12.46□□□□□ -0.42
SCNN1A-215ENST00000540037 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.46□□□□□ -0.42
SCNN1A-215ENST00000540037 RTL10Q7L3V2 364 aa12.46□□□□□ -0.42
SCNN1A-215ENST00000540037 OR1M1Q8NGA1 313 aa12.46□□□□□ -0.42
SCNN1A-215ENST00000540037 OR52N4Q8NGI2 321 aa12.46□□□□□ -0.42
SCNN1A-215ENST00000540037 NICN1Q9BSH3 213 aa12.46□□□□□ -0.42
SCNN1A-215ENST00000540037 OR11A1Q9GZK7 315 aa12.46□□□□□ -0.42
SCNN1A-215ENST00000540037 TMEM100Q9NV29 134 aa12.46□□□□□ -0.42
SCNN1A-215ENST00000540037 RHBDD3Q9Y3P4 386 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms