RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 DSPPQ9NZW4 1301 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 H0YIG0 161 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 BRINP1O60477 761 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 FCGR2AP12318 317 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 ZNF250P15622 560 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 THBS2P35442 1172 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 EMDP50402 254 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 MTCP1P56278 107 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 RPL18Q07020 188 aaKnown RBP9.03□□□□□ -0.96
TRAF1-202ENST00000540010 OGFOD3Q6PK18 319 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 GABRG1Q8N1C3 465 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 MIB2Q96AX9 1013 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 PELI1Q96FA3 418 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 CMSS1Q9BQ75 279 aaKnown RBP9.03□□□□□ -0.96
TRAF1-202ENST00000540010 HINT2Q9BX68 163 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 ERVMER34-1Q9H9K5 563 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 ZNF346Q9UL40 294 aaKnown RBP9.03□□□□□ -0.96
TRAF1-202ENST00000540010 TRAV36DV7A0A075B6V5 113 aa9.02□□□□□ -0.96
TRAF1-202ENST00000540010 HSPB6O14558 160 aa9.02□□□□□ -0.96
TRAF1-202ENST00000540010 NKX2-2O95096 273 aa9.02□□□□□ -0.96
TRAF1-202ENST00000540010 IGHG1P01857 330 aa9.02□□□□□ -0.96
TRAF1-202ENST00000540010 SERPINE2P07093 398 aa9.02□□□□□ -0.96
TRAF1-202ENST00000540010 TPOP07202 933 aa9.02□□□□□ -0.96
TRAF1-202ENST00000540010 CASRP41180 1078 aa9.02□□□□□ -0.96
TRAF1-202ENST00000540010 EEF1A1P68104 462 aaKnown RBP9.02□□□□□ -0.96
TRAF1-202ENST00000540010 SNTB1Q13884 538 aaKnown RBP9.02□□□□□ -0.96
TRAF1-202ENST00000540010 CLINT1Q14677 625 aa9.02□□□□□ -0.96
TRAF1-202ENST00000540010 STK11Q15831 433 aa9.02□□□□□ -0.96
TRAF1-202ENST00000540010 ACKR1Q16570 336 aa9.02□□□□□ -0.96
TRAF1-202ENST00000540010 LPAL2Q16609 132 aa9.02□□□□□ -0.96
TRAF1-202ENST00000540010 FAM122BQ7Z309 247 aa9.02□□□□□ -0.96
TRAF1-202ENST00000540010 ZAR1Q86SH2 424 aa9.02□□□□□ -0.96
TRAF1-202ENST00000540010 SLC25A45Q8N413 288 aa9.02□□□□□ -0.96
TRAF1-202ENST00000540010 EID2Q8N6I1 236 aa9.02□□□□□ -0.96
TRAF1-202ENST00000540010 C16orf52Q8NHV5 167 aa9.02□□□□□ -0.96
TRAF1-202ENST00000540010 DNASE2BQ8WZ79 361 aa9.02□□□□□ -0.96
TRAF1-202ENST00000540010 PIGCQ92535 297 aa9.02□□□□□ -0.96
TRAF1-202ENST00000540010 SPTSSAQ969W0 71 aa9.02□□□□□ -0.96
TRAF1-202ENST00000540010 CLDN23Q96B33 292 aa9.02□□□□□ -0.96
TRAF1-202ENST00000540010 DCBLD2Q96PD2 775 aa9.02□□□□□ -0.96
TRAF1-202ENST00000540010 GPA33Q99795 319 aa9.02□□□□□ -0.96
TRAF1-202ENST00000540010 NAA11Q9BSU3 229 aaPredicted RBP9.02□□□□□ -0.96
TRAF1-202ENST00000540010 UNKLQ9H9P5 680 aaKnown RBP9.02□□□□□ -0.96
TRAF1-202ENST00000540010 ZNF749O43361 778 aa9.02□□□□□ -0.97
TRAF1-202ENST00000540010 SLC34A2O95436 690 aa9.02□□□□□ -0.97
TRAF1-202ENST00000540010 JMJD7P0C870 316 aa9.02□□□□□ -0.97
TRAF1-202ENST00000540010 SLC35D3Q5M8T2 416 aa9.02□□□□□ -0.97
TRAF1-202ENST00000540010 GLIPR1L1Q6UWM5 242 aa9.02□□□□□ -0.97
TRAF1-202ENST00000540010 FBXW12Q6X9E4 464 aa9.02□□□□□ -0.97
TRAF1-202ENST00000540010 ADGRE4PQ86SQ3 457 aa9.02□□□□□ -0.97
TRAF1-202ENST00000540010 SYS1Q8N2H4 156 aa9.02□□□□□ -0.97
TRAF1-202ENST00000540010 LILRB2Q8N423 598 aa9.02□□□□□ -0.97
TRAF1-202ENST00000540010 SUMF1Q8NBK3 374 aa9.02□□□□□ -0.97
TRAF1-202ENST00000540010 FAM213BQ8TBF2 198 aa9.02□□□□□ -0.97
TRAF1-202ENST00000540010 PIGTQ969N2 578 aa9.02□□□□□ -0.97
TRAF1-202ENST00000540010 SIGLEC7Q9Y286 467 aa9.02□□□□□ -0.97
TRAF1-202ENST00000540010 TRBV11-1A0A0K0K1C0 115 aa9.02□□□□□ -0.97
TRAF1-202ENST00000540010 SULT1C2O00338 296 aa9.02□□□□□ -0.97
TRAF1-202ENST00000540010 BET1O15155 118 aa9.02□□□□□ -0.97
TRAF1-202ENST00000540010 ZFPL1O95159 310 aa9.02□□□□□ -0.97
TRAF1-202ENST00000540010 TGM6O95932 706 aa9.02□□□□□ -0.97
TRAF1-202ENST00000540010 IFNA17P01571 189 aa9.02□□□□□ -0.97
TRAF1-202ENST00000540010 S100PP25815 95 aa9.02□□□□□ -0.97
TRAF1-202ENST00000540010 OTX2P32243 289 aa9.02□□□□□ -0.97
TRAF1-202ENST00000540010 CD80P33681 288 aa9.02□□□□□ -0.97
TRAF1-202ENST00000540010 P2RX1P51575 399 aa9.02□□□□□ -0.97
TRAF1-202ENST00000540010 BDH1Q02338 343 aa9.02□□□□□ -0.97
TRAF1-202ENST00000540010 PDZK1IP1Q13113 114 aa9.02□□□□□ -0.97
TRAF1-202ENST00000540010 TMEM200AQ86VY9 491 aa9.02□□□□□ -0.97
TRAF1-202ENST00000540010 SUMF2Q8NBJ7 301 aa9.02□□□□□ -0.97
TRAF1-202ENST00000540010 OR4D9Q8NGE8 314 aa9.02□□□□□ -0.97
TRAF1-202ENST00000540010 OR4C3Q8NH37 302 aa9.02□□□□□ -0.97
TRAF1-202ENST00000540010 CNTNAP3Q9BZ76 1288 aa9.02□□□□□ -0.97
TRAF1-202ENST00000540010 FSCN3Q9NQT6 498 aa9.02□□□□□ -0.97
TRAF1-202ENST00000540010 TRIOO75962 3097 aa9.02□□□□□ -0.97
TRAF1-202ENST00000540010 ITGB2P05107 769 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 ACSM4P0C7M7 580 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 CALCBP10092 127 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 FOLR1P15328 257 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 EIF2S3P41091 472 aaKnown RBP9.01□□□□□ -0.97
TRAF1-202ENST00000540010 PSG6Q00889 435 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 MGAT2Q10469 447 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 BAMBIQ13145 260 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 VWA2Q5GFL6 755 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 SLC22A24Q8N4F4 322 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 KCNRGQ8N5I3 272 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 OR2G2Q8NGZ5 317 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 KCNG3Q8TAE7 436 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 TSLPQ969D9 159 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 OR5B12Q96R08 314 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 DUSP23Q9BVJ7 150 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 DNTTIP1Q9H147 329 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 LUZP4Q9P127 313 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 FBXO4Q9UKT5 387 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 LOC107986453A0A1B0GWG9 222 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 K7ESF4 209 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 AKR7A3O95154 331 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 BPNT1O95861 308 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 OR4E1P0C645 316 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 MMP15P51511 669 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms