RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 TNFSF11O14788 317 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 OR2F2O95006 317 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 DSCR4P56555 118 aaPredicted RBP5.9□□□□□ -1.46
LSAMP-207ENST00000539563 SSBP1Q04837 148 aaKnown RBP5.9□□□□□ -1.46
LSAMP-207ENST00000539563 OR2F1Q13607 317 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 TIGD3Q6B0B8 471 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 ACSM5Q6NUN0 579 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 FAM199XQ6PEV8 388 aaPredicted RBP5.9□□□□□ -1.46
LSAMP-207ENST00000539563 FAM71CQ8NEG0 241 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 SCARB1Q8WTV0 552 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 OPALINQ96PE5 141 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 SLC5A6Q9Y289 635 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 F2RP25116 425 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 NPY4RP50391 375 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 RPL18Q07020 188 aaKnown RBP5.9□□□□□ -1.46
LSAMP-207ENST00000539563 ZNF718Q3SXZ3 478 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 LAIR1Q6GTX8 287 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 ETFBKMTQ8IXQ9 262 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 OR51S1Q8NGJ8 323 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 PIGMQ9H3S5 423 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 ZMAT3Q9HA38 289 aaKnown RBP5.9□□□□□ -1.46
LSAMP-207ENST00000539563 EXO1Q9UQ84 846 aaKnown RBP5.9□□□□□ -1.46
LSAMP-207ENST00000539563 RNF24Q9Y225 148 aa5.9□□□□□ -1.46
LSAMP-207ENST00000539563 TDRD6O60522 2096 aaKnown RBP5.9□□□□□ -1.47
LSAMP-207ENST00000539563 IGHV3-20A0A0C4DH32 117 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 ANKUB1A6NFN9 424 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 POM121CA8CG34 1229 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 LMO7DNF2Z398 122 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 FGF17O60258 216 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 CBR3O75828 277 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 MT-ND4LP03901 98 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 CAPZBP47756 277 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 DHODHQ02127 395 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 OR1N1Q8NGS0 311 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 OR51F2Q8NH61 342 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 C16orf52Q8NHV5 167 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 ST7LQ8TDW4 575 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 CCDC74BQ96LY2 380 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 TAAR6Q96RI8 345 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 CACNA1CQ13936 2221 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 COL24A1Q17RW2 1714 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 LOC107986453A0A1B0GWG9 222 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 C5orf49A4QMS7 147 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 FIGNL2A6NMB9 653 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 FAM166BA8MTA8 275 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 ZNF195O14628 629 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 ITGBL1O95965 494 aaPredicted RBP5.9□□□□□ -1.47
LSAMP-207ENST00000539563 MBP02144 154 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 NDUFB7P17568 137 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 HOXD11P31277 338 aaPredicted RBP5.9□□□□□ -1.47
LSAMP-207ENST00000539563 ZDHHC23Q8IYP9 409 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 OR5AS1Q8N127 324 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 TMEM217Q8N7C4 229 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 ZC3HAV1LQ96H79 300 aaKnown RBP5.9□□□□□ -1.47
LSAMP-207ENST00000539563 ATF6BQ99941 703 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 DEFB127Q9H1M4 99 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 ERVMER34-1Q9H9K5 563 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 ACOXLQ9NUZ1 547 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 H0Y8X5 98 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 ST8SIA3O43173 380 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 CYC1P08574 325 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 MGST1P10620 155 aaKnown RBP5.9□□□□□ -1.47
LSAMP-207ENST00000539563 FCN2Q15485 313 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 CDONQ4KMG0 1287 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 PRAMEF5Q5TYX0 476 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 PRAMEF6Q5VXH4 476 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 OR2A2Q6IF42 318 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 ADGRG3Q86Y34 549 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 MENTQ9BUN1 341 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 GNB4Q9HAV0 340 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 HINT3Q9NQE9 182 aaKnown RBP5.9□□□□□ -1.47
LSAMP-207ENST00000539563 DLL4Q9NR61 685 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 TAS2R5Q9NYW4 299 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 SLC25A37Q9NYZ2 338 aa5.9□□□□□ -1.47
LSAMP-207ENST00000539563 TRAV1-2A0A0B4J238 106 aa5.89□□□□□ -1.47
LSAMP-207ENST00000539563 TCRBV5S2A0A599 114 aa5.89□□□□□ -1.47
LSAMP-207ENST00000539563 SLC2A1P11166 492 aa5.89□□□□□ -1.47
LSAMP-207ENST00000539563 TRA2AQ13595 282 aaKnown RBP eCLIP5.89□□□□□ -1.47
LSAMP-207ENST00000539563 CLINT1Q14677 625 aa5.89□□□□□ -1.47
LSAMP-207ENST00000539563 ACKR1Q16570 336 aa5.89□□□□□ -1.47
LSAMP-207ENST00000539563 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.89□□□□□ -1.47
LSAMP-207ENST00000539563 ZNF385BQ569K4 471 aa5.89□□□□□ -1.47
LSAMP-207ENST00000539563 CELF2-AS1Q8N7Q2 184 aa5.89□□□□□ -1.47
LSAMP-207ENST00000539563 KDF1Q8NAX2 398 aaPredicted RBP5.89□□□□□ -1.47
LSAMP-207ENST00000539563 GNPNAT1Q96EK6 184 aaPredicted RBP5.89□□□□□ -1.47
LSAMP-207ENST00000539563 TMEM43Q9BTV4 400 aa5.89□□□□□ -1.47
LSAMP-207ENST00000539563 A0A0A6YYD5 115 aa5.89□□□□□ -1.47
LSAMP-207ENST00000539563 ADAM10O14672 748 aa5.89□□□□□ -1.47
LSAMP-207ENST00000539563 TRAF3IP2O43734 574 aaPredicted RBP5.89□□□□□ -1.47
LSAMP-207ENST00000539563 SMIM18P0DKX4 95 aa5.89□□□□□ -1.47
LSAMP-207ENST00000539563 CSN1S1P47710 185 aa5.89□□□□□ -1.47
LSAMP-207ENST00000539563 GPR12P47775 334 aa5.89□□□□□ -1.47
LSAMP-207ENST00000539563 UBE2G2P60604 165 aa5.89□□□□□ -1.47
LSAMP-207ENST00000539563 BTN1A1Q13410 526 aa5.89□□□□□ -1.47
LSAMP-207ENST00000539563 ASAH1Q13510 395 aa5.89□□□□□ -1.47
LSAMP-207ENST00000539563 AQP6Q13520 282 aa5.89□□□□□ -1.47
LSAMP-207ENST00000539563 TESK1Q15569 626 aa5.89□□□□□ -1.47
LSAMP-207ENST00000539563 AGBL4Q5VU57 503 aa5.89□□□□□ -1.47
LSAMP-207ENST00000539563 SPEM1Q8N4L4 309 aa5.89□□□□□ -1.47
LSAMP-207ENST00000539563 OR2G3Q8NGZ4 309 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms