RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 BAIAP2Q9UQB8 552 aa13.34□□□□□ -0.27
CIT-210ENST00000539413 TVP23AA6NH52 213 aa13.33□□□□□ -0.28
CIT-210ENST00000539413 TIMM8AO60220 97 aaPredicted RBP13.33□□□□□ -0.28
CIT-210ENST00000539413 FKBP6O75344 327 aa13.33□□□□□ -0.28
CIT-210ENST00000539413 CBX1P83916 185 aa13.33□□□□□ -0.28
CIT-210ENST00000539413 RSPO1Q2MKA7 263 aaPredicted RBP13.33□□□□□ -0.28
CIT-210ENST00000539413 LYPD4Q6UWN0 246 aa13.33□□□□□ -0.28
CIT-210ENST00000539413 CD300LDQ6UXZ3 194 aa13.33□□□□□ -0.28
CIT-210ENST00000539413 HIPK1Q86Z02 1210 aa13.33□□□□□ -0.28
CIT-210ENST00000539413 HS3ST5Q8IZT8 346 aa13.33□□□□□ -0.28
CIT-210ENST00000539413 SLCO4A1Q96BD0 722 aa13.33□□□□□ -0.28
CIT-210ENST00000539413 CMBLQ96DG6 245 aa13.33□□□□□ -0.28
CIT-210ENST00000539413 DCLRE1CQ96SD1 692 aaKnown RBP13.33□□□□□ -0.28
CIT-210ENST00000539413 RBM4Q9BWF3 364 aaKnown RBP13.33□□□□□ -0.28
CIT-210ENST00000539413 NARFLQ9H6Q4 476 aa13.33□□□□□ -0.28
CIT-210ENST00000539413 MSL2Q9HCI7 577 aa13.33□□□□□ -0.28
CIT-210ENST00000539413 DECR2Q9NUI1 292 aa13.33□□□□□ -0.28
CIT-210ENST00000539413 PDP1Q9P0J1 537 aaPredicted RBP13.33□□□□□ -0.28
CIT-210ENST00000539413 CYB5R1Q9UHQ9 305 aa13.33□□□□□ -0.28
CIT-210ENST00000539413 CACNG2Q9Y698 323 aa13.33□□□□□ -0.28
CIT-210ENST00000539413 CHD3Q12873 2000 aaKnown RBP13.33□□□□□ -0.28
CIT-210ENST00000539413 IGHV1-69-2A0A0G2JMI3 117 aa13.32□□□□□ -0.28
CIT-210ENST00000539413 LOC100289279A0A1B0GTE1 492 aa13.32□□□□□ -0.28
CIT-210ENST00000539413 ARRDC5A6NEK1 342 aa13.32□□□□□ -0.28
CIT-210ENST00000539413 WNT9BO14905 357 aa13.32□□□□□ -0.28
CIT-210ENST00000539413 PPIHO43447 177 aaKnown RBP13.32□□□□□ -0.28
CIT-210ENST00000539413 GYPBP06028 91 aa13.32□□□□□ -0.28
CIT-210ENST00000539413 PSKH1P11801 424 aa13.32□□□□□ -0.28
CIT-210ENST00000539413 ZNF823P16415 610 aa13.32□□□□□ -0.28
CIT-210ENST00000539413 HOXB6P17509 224 aaKnown RBP13.32□□□□□ -0.28
CIT-210ENST00000539413 TUBG1P23258 451 aa13.32□□□□□ -0.28
CIT-210ENST00000539413 LIPAP38571 399 aa13.32□□□□□ -0.28
CIT-210ENST00000539413 RPS27P42677 84 aaKnown RBP13.32□□□□□ -0.28
CIT-210ENST00000539413 CRYBB2P43320 205 aa13.32□□□□□ -0.28
CIT-210ENST00000539413 TMEM33P57088 247 aa13.32□□□□□ -0.28
CIT-210ENST00000539413 CCNIQ14094 377 aa13.32□□□□□ -0.28
CIT-210ENST00000539413 FAM209AQ5JX71 171 aa13.32□□□□□ -0.28
CIT-210ENST00000539413 FAM166AQ6J272 317 aa13.32□□□□□ -0.28
CIT-210ENST00000539413 USP51Q70EK9 711 aa13.32□□□□□ -0.28
CIT-210ENST00000539413 IQCF1Q8N6M8 205 aa13.32□□□□□ -0.28
CIT-210ENST00000539413 PAPD5Q8NDF8 572 aaKnown RBP13.32□□□□□ -0.28
CIT-210ENST00000539413 OR2AJ1Q8NGZ0 328 aa13.32□□□□□ -0.28
CIT-210ENST00000539413 TEX47Q8TBZ9 253 aa13.32□□□□□ -0.28
CIT-210ENST00000539413 MAP6Q96JE9 813 aa13.32□□□□□ -0.28
CIT-210ENST00000539413 PITX2Q99697 317 aa13.32□□□□□ -0.28
CIT-210ENST00000539413 SAP30LQ9HAJ7 183 aa13.32□□□□□ -0.28
CIT-210ENST00000539413 PNRC2Q9NPJ4 139 aaKnown RBP13.32□□□□□ -0.28
CIT-210ENST00000539413 TUBG2Q9NRH3 451 aa13.32□□□□□ -0.28
CIT-210ENST00000539413 CYSLTR2Q9NS75 346 aa13.32□□□□□ -0.28
CIT-210ENST00000539413 PTTG3PQ9NZH4 202 aa13.32□□□□□ -0.28
CIT-210ENST00000539413 CGGBP1Q9UFW8 167 aaPredicted RBP13.32□□□□□ -0.28
CIT-210ENST00000539413 PURGQ9UJV8 347 aaKnown RBP13.32□□□□□ -0.28
CIT-210ENST00000539413 YLPM1P49750 1951 aaKnown RBP13.31□□□□□ -0.28
CIT-210ENST00000539413 H3BN98 237 aa13.31□□□□□ -0.28
CIT-210ENST00000539413 LMX1BO60663 402 aa13.31□□□□□ -0.28
CIT-210ENST00000539413 E2F6O75461 281 aa13.31□□□□□ -0.28
CIT-210ENST00000539413 TGFAP01135 160 aa13.31□□□□□ -0.28
CIT-210ENST00000539413 ADH4P08319 380 aa13.31□□□□□ -0.28
CIT-210ENST00000539413 CLUP10909 449 aa13.31□□□□□ -0.28
CIT-210ENST00000539413 KITLGP21583 273 aa13.31□□□□□ -0.28
CIT-210ENST00000539413 PRKACGP22612 351 aa13.31□□□□□ -0.28
CIT-210ENST00000539413 RGS6P49758 472 aa13.31□□□□□ -0.28
CIT-210ENST00000539413 HLXQ14774 488 aaPredicted RBP13.31□□□□□ -0.28
CIT-210ENST00000539413 KRTAP27-1Q3LI81 207 aa13.31□□□□□ -0.28
CIT-210ENST00000539413 SPRNQ5BIV9 151 aa13.31□□□□□ -0.28
CIT-210ENST00000539413 Q6ZR03 302 aa13.31□□□□□ -0.28
CIT-210ENST00000539413 CLDND2Q8NHS1 167 aa13.31□□□□□ -0.28
CIT-210ENST00000539413 HPS1Q92902 700 aa13.31□□□□□ -0.28
CIT-210ENST00000539413 PTP4A1Q93096 173 aa13.31□□□□□ -0.28
CIT-210ENST00000539413 HAVCR1Q96D42 359 aa13.31□□□□□ -0.28
CIT-210ENST00000539413 COG8Q96MW5 612 aa13.31□□□□□ -0.28
CIT-210ENST00000539413 ATF6BQ99941 703 aa13.31□□□□□ -0.28
CIT-210ENST00000539413 NMNAT2Q9BZQ4 307 aa13.31□□□□□ -0.28
CIT-210ENST00000539413 YY1AP1Q9H869 796 aa13.31□□□□□ -0.28
CIT-210ENST00000539413 WDR76Q9H967 626 aa13.31□□□□□ -0.28
CIT-210ENST00000539413 DNAJB9Q9UBS3 223 aa13.31□□□□□ -0.28
CIT-210ENST00000539413 KCNG2Q9UJ96 466 aa13.31□□□□□ -0.28
CIT-210ENST00000539413 KCNS2Q9ULS6 477 aa13.31□□□□□ -0.28
CIT-210ENST00000539413 COMMD3-BMI1R4GMX3 469 aa13.31□□□□□ -0.28
CIT-210ENST00000539413 HIVEP2P31629 2446 aa13.3□□□□□ -0.28
CIT-210ENST00000539413 RIIAD1A6NNX1 92 aa13.3□□□□□ -0.28
CIT-210ENST00000539413 F5H5K5 113 aa13.3□□□□□ -0.28
CIT-210ENST00000539413 J3QW42 95 aa13.3□□□□□ -0.28
CIT-210ENST00000539413 IFNGP01579 166 aa13.3□□□□□ -0.28
CIT-210ENST00000539413 ACSM4P0C7M7 580 aa13.3□□□□□ -0.28
CIT-210ENST00000539413 SPI1P17947 270 aa13.3□□□□□ -0.28
CIT-210ENST00000539413 IGFBP5P24593 272 aa13.3□□□□□ -0.28
CIT-210ENST00000539413 GRK5P34947 590 aa13.3□□□□□ -0.28
CIT-210ENST00000539413 SLC25A1P53007 311 aa13.3□□□□□ -0.28
CIT-210ENST00000539413 CDK5R2Q13319 367 aa13.3□□□□□ -0.28
CIT-210ENST00000539413 CHRFAM7AQ494W8 412 aa13.3□□□□□ -0.28
CIT-210ENST00000539413 ZMAT1Q5H9K5 638 aa13.3□□□□□ -0.28
CIT-210ENST00000539413 AVPI1Q5T686 147 aa13.3□□□□□ -0.28
CIT-210ENST00000539413 NAA40Q86UY6 237 aa13.3□□□□□ -0.28
CIT-210ENST00000539413 ZNF511Q8NB15 262 aa13.3□□□□□ -0.28
CIT-210ENST00000539413 OR10S1Q8NGN2 331 aa13.3□□□□□ -0.28
CIT-210ENST00000539413 APOBEC3DQ96AK3 386 aaPredicted RBP13.3□□□□□ -0.28
CIT-210ENST00000539413 ELMOD3Q96FG2 381 aa13.3□□□□□ -0.28
CIT-210ENST00000539413 HCAR1Q9BXC0 346 aa13.3□□□□□ -0.28
CIT-210ENST00000539413 MED20Q9H944 212 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms