RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 TMEM106BQ9NUM4 274 aa18.77■□□□□ 0.6
SCARB1-206ENST00000539320 PTTG3PQ9NZH4 202 aa18.77■□□□□ 0.6
SCARB1-206ENST00000539320 TMCC3Q9ULS5 477 aa18.77■□□□□ 0.6
SCARB1-206ENST00000539320 B9D1Q9UPM9 204 aa18.77■□□□□ 0.6
SCARB1-206ENST00000539320 NPTNQ9Y639 398 aa18.77■□□□□ 0.6
SCARB1-206ENST00000539320 LOC105371242A0A075B767 164 aa18.76■□□□□ 0.59
SCARB1-206ENST00000539320 A0A0A6YYJ9 748 aa18.76■□□□□ 0.59
SCARB1-206ENST00000539320 J3QLI3 93 aa18.76■□□□□ 0.59
SCARB1-206ENST00000539320 DCTN3O75935 186 aa18.76■□□□□ 0.59
SCARB1-206ENST00000539320 IGHV2-70P01814 119 aa18.76■□□□□ 0.59
SCARB1-206ENST00000539320 RAC2P15153 192 aa18.76■□□□□ 0.59
SCARB1-206ENST00000539320 HIST1H1CP16403 213 aaKnown RBP18.76■□□□□ 0.59
SCARB1-206ENST00000539320 GSSP48637 474 aa18.76■□□□□ 0.59
SCARB1-206ENST00000539320 HIST1H3AP68431 136 aa18.76■□□□□ 0.59
SCARB1-206ENST00000539320 COX10Q12887 443 aa18.76■□□□□ 0.59
SCARB1-206ENST00000539320 HNRNPA0Q13151 305 aaKnown RBP18.76■□□□□ 0.59
SCARB1-206ENST00000539320 HIST2H3PS2Q5TEC6 136 aa18.76■□□□□ 0.59
SCARB1-206ENST00000539320 DCAF12L2Q5VW00 463 aa18.76■□□□□ 0.59
SCARB1-206ENST00000539320 ZNF620Q6ZNG0 422 aa18.76■□□□□ 0.59
SCARB1-206ENST00000539320 C1orf229Q6ZS94 237 aaPredicted RBP18.76■□□□□ 0.59
SCARB1-206ENST00000539320 HIST2H3AQ71DI3 136 aa18.76■□□□□ 0.59
SCARB1-206ENST00000539320 DEFB107AQ8IZN7 70 aa18.76■□□□□ 0.59
SCARB1-206ENST00000539320 OR6V1Q8N148 313 aa18.76■□□□□ 0.59
SCARB1-206ENST00000539320 SLC26A10Q8NG04 563 aa18.76■□□□□ 0.59
SCARB1-206ENST00000539320 OR4K13Q8NH42 304 aa18.76■□□□□ 0.59
SCARB1-206ENST00000539320 ITLN1Q8WWA0 313 aa18.76■□□□□ 0.59
SCARB1-206ENST00000539320 PTP4A1Q93096 173 aa18.76■□□□□ 0.59
SCARB1-206ENST00000539320 APOBEC3DQ96AK3 386 aaPredicted RBP18.76■□□□□ 0.59
SCARB1-206ENST00000539320 SAMD8Q96LT4 415 aa18.76■□□□□ 0.59
SCARB1-206ENST00000539320 TMPRSS13Q9BYE2 586 aa18.76■□□□□ 0.59
SCARB1-206ENST00000539320 IL1RAPQ9NPH3 570 aa18.76■□□□□ 0.59
SCARB1-206ENST00000539320 DYSFO75923 2080 aa18.76■□□□□ 0.59
SCARB1-206ENST00000539320 SURF4O15260 269 aa18.75■□□□□ 0.59
SCARB1-206ENST00000539320 AVPP01185 164 aa18.75■□□□□ 0.59
SCARB1-206ENST00000539320 EPHA1P21709 976 aa18.75■□□□□ 0.59
SCARB1-206ENST00000539320 NOS3P29474 1203 aa18.75■□□□□ 0.59
SCARB1-206ENST00000539320 GYS2P54840 703 aa18.75■□□□□ 0.59
SCARB1-206ENST00000539320 MXRA7P84157 204 aa18.75■□□□□ 0.59
SCARB1-206ENST00000539320 SPATS1Q496A3 300 aa18.75■□□□□ 0.59
SCARB1-206ENST00000539320 CORO6Q6QEF8 472 aa18.75■□□□□ 0.59
SCARB1-206ENST00000539320 FBXW12Q6X9E4 464 aa18.75■□□□□ 0.59
SCARB1-206ENST00000539320 C1QL2Q7Z5L3 287 aa18.75■□□□□ 0.59
SCARB1-206ENST00000539320 ZDHHC21Q8IVQ6 265 aa18.75■□□□□ 0.59
SCARB1-206ENST00000539320 OR5AS1Q8N127 324 aa18.75■□□□□ 0.59
SCARB1-206ENST00000539320 ZNF283Q8N7M2 679 aa18.75■□□□□ 0.59
SCARB1-206ENST00000539320 SEMA6DQ8NFY4 1073 aa18.75■□□□□ 0.59
SCARB1-206ENST00000539320 OR5L1Q8NGL2 311 aa18.75■□□□□ 0.59
SCARB1-206ENST00000539320 GNPDA2Q8TDQ7 276 aa18.75■□□□□ 0.59
SCARB1-206ENST00000539320 ST7LQ8TDW4 575 aa18.75■□□□□ 0.59
SCARB1-206ENST00000539320 SRA1Q9HD15 236 aaKnown RBP18.75■□□□□ 0.59
SCARB1-206ENST00000539320 RPRD1BQ9NQG5 326 aaKnown RBP18.75■□□□□ 0.59
SCARB1-206ENST00000539320 IL19Q9UHD0 177 aa18.75■□□□□ 0.59
SCARB1-206ENST00000539320 ARHGAP32A7KAX9 2087 aa18.75■□□□□ 0.59
SCARB1-206ENST00000539320 VENTXO95231 258 aa18.74■□□□□ 0.59
SCARB1-206ENST00000539320 GATA3P23771 443 aa18.74■□□□□ 0.59
SCARB1-206ENST00000539320 TSPAN31Q12999 210 aa18.74■□□□□ 0.59
SCARB1-206ENST00000539320 HLXQ14774 488 aaPredicted RBP18.74■□□□□ 0.59
SCARB1-206ENST00000539320 SLC36A3Q495N2 470 aa18.74■□□□□ 0.59
SCARB1-206ENST00000539320 PGBD2Q6P3X8 592 aa18.74■□□□□ 0.59
SCARB1-206ENST00000539320 PIGWQ7Z7B1 504 aa18.74■□□□□ 0.59
SCARB1-206ENST00000539320 LINC00346Q8IVM7 164 aa18.74■□□□□ 0.59
SCARB1-206ENST00000539320 SPICQ8N5J4 248 aa18.74■□□□□ 0.59
SCARB1-206ENST00000539320 SDR9C7Q8NEX9 313 aa18.74■□□□□ 0.59
SCARB1-206ENST00000539320 ZNF418Q8TF45 676 aaPredicted RBP18.74■□□□□ 0.59
SCARB1-206ENST00000539320 OR2V2Q96R30 315 aa18.74■□□□□ 0.59
SCARB1-206ENST00000539320 IDH3BO43837 385 aa18.73■□□□□ 0.59
SCARB1-206ENST00000539320 FOXH1O75593 365 aa18.73■□□□□ 0.59
SCARB1-206ENST00000539320 SBK2P0C263 348 aa18.73■□□□□ 0.59
SCARB1-206ENST00000539320 LCN2P80188 198 aa18.73■□□□□ 0.59
SCARB1-206ENST00000539320 DBPQ10586 325 aaPredicted RBP18.73■□□□□ 0.59
SCARB1-206ENST00000539320 OR2T2Q6IF00 324 aa18.73■□□□□ 0.59
SCARB1-206ENST00000539320 SLC18B1Q6NT16 456 aa18.73■□□□□ 0.59
SCARB1-206ENST00000539320 ZBTB46Q86UZ6 589 aa18.73■□□□□ 0.59
SCARB1-206ENST00000539320 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.73■□□□□ 0.59
SCARB1-206ENST00000539320 FN3KQ9H479 309 aa18.73■□□□□ 0.59
SCARB1-206ENST00000539320 PCDHB10Q9UN67 800 aa18.73■□□□□ 0.59
SCARB1-206ENST00000539320 PPP1R3CQ9UQK1 317 aa18.73■□□□□ 0.59
SCARB1-206ENST00000539320 CDH10Q9Y6N8 788 aa18.73■□□□□ 0.59
SCARB1-206ENST00000539320 ATP6V1B2P21281 511 aa18.72■□□□□ 0.59
SCARB1-206ENST00000539320 BTG1P62324 171 aa18.72■□□□□ 0.59
SCARB1-206ENST00000539320 TMEM155Q4W5P6 130 aa18.72■□□□□ 0.59
SCARB1-206ENST00000539320 CFAP77Q6ZQR2 320 aa18.72■□□□□ 0.59
SCARB1-206ENST00000539320 ATG16L2Q8NAA4 619 aa18.72■□□□□ 0.59
SCARB1-206ENST00000539320 OR10AD1Q8NGE0 317 aa18.72■□□□□ 0.59
SCARB1-206ENST00000539320 OR9Q2Q8NGE9 314 aa18.72■□□□□ 0.59
SCARB1-206ENST00000539320 OR52L1Q8NGH7 329 aa18.72■□□□□ 0.59
SCARB1-206ENST00000539320 ZFAND2BQ8WV99 257 aa18.72■□□□□ 0.59
SCARB1-206ENST00000539320 SIGLEC11Q96RL6 698 aa18.72■□□□□ 0.59
SCARB1-206ENST00000539320 LYVE1Q9Y5Y7 322 aa18.72■□□□□ 0.59
SCARB1-206ENST00000539320 OR6C68A6NDL8 312 aa18.71■□□□□ 0.59
SCARB1-206ENST00000539320 HAX1O00165 279 aa18.71■□□□□ 0.59
SCARB1-206ENST00000539320 RGS9O75916 674 aaPredicted RBP18.71■□□□□ 0.59
SCARB1-206ENST00000539320 KRT36O76013 467 aa18.71■□□□□ 0.59
SCARB1-206ENST00000539320 ADRA2CP18825 462 aa18.71■□□□□ 0.59
SCARB1-206ENST00000539320 MMP16P51512 607 aa18.71■□□□□ 0.59
SCARB1-206ENST00000539320 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.71■□□□□ 0.59
SCARB1-206ENST00000539320 KRTAP27-1Q3LI81 207 aa18.71■□□□□ 0.59
SCARB1-206ENST00000539320 CLEC12AQ5QGZ9 265 aa18.71■□□□□ 0.59
SCARB1-206ENST00000539320 RPL13AP3Q6NVV1 102 aa18.71■□□□□ 0.59
SCARB1-206ENST00000539320 SLC27A4Q6P1M0 643 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms