RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 EVI2BP34910 448 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 SLC1A1P43005 524 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 SEMG2Q02383 582 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 RPL18AQ02543 176 aaKnown RBP0.73□□□□□ -2.29
HIF1A-204ENST00000539097 FGL1Q08830 312 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 FADDQ13158 208 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 EIF4EBP2Q13542 120 aaPredicted RBP0.73□□□□□ -2.29
HIF1A-204ENST00000539097 SPCS2Q15005 226 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 RSPO1Q2MKA7 263 aaPredicted RBP0.73□□□□□ -2.29
HIF1A-204ENST00000539097 NSUN5P1Q3KNT7 163 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 TIMM23BQ5SRD1 257 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF658Q5TYW1 1059 aaPredicted RBP0.73□□□□□ -2.29
HIF1A-204ENST00000539097 PLCXD3Q63HM9 321 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF836Q6ZNA1 936 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 ARCQ7LC44 396 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 BHLHA9Q7RTU4 235 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 C6orf120Q7Z4R8 191 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 MMAAQ8IVH4 418 aaKnown RBP0.73□□□□□ -2.29
HIF1A-204ENST00000539097 C12orf56Q8IXR9 622 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 KATNAL2Q8IYT4 538 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 FAM58AQ8N1B3 248 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 C11orf42Q8N5U0 333 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 MS4A15Q8N5U1 240 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 OR52H1Q8NGJ2 320 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 LINC01006Q8NI28 216 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 KCNG3Q8TAE7 436 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 COPS8Q99627 209 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 BPIFA3Q9BQP9 254 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 NICN1Q9BSH3 213 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 C9orf16Q9BUW7 83 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 CHID1Q9BWS9 393 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 UPF3BQ9BZI7 483 aaKnown RBP0.73□□□□□ -2.29
HIF1A-204ENST00000539097 RAB1BQ9H0U4 201 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 GEMIN7Q9H840 131 aaKnown RBP0.73□□□□□ -2.29
HIF1A-204ENST00000539097 UGT1A7Q9HAW7 530 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 UGT1A10Q9HAW8 530 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 UGT1A8Q9HAW9 530 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 VANGL2Q9ULK5 521 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 TFR2Q9UP52 801 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF337Q9Y3M9 751 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 OR51B4Q9Y5P0 310 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 KIAA1671Q9BY89 1806 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 TET3O43151 1660 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 EIF3AQ14152 1382 aaKnown RBP0.73□□□□□ -2.29
HIF1A-204ENST00000539097 A0A087WWV3 80 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 ARPC4-TTLL3A0A0A6YYG9 625 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 IGHV3-66A0A0C4DH42 116 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 A0A1W2PRF3 423 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 A0A1W2PRM7 423 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 C12orf71A8MTZ7 269 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 TMCO5BA8MYB1 307 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 CCL21O00585 134 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 RNF13O43567 381 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 CSTAP01040 98 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 SERPIND1P05546 499 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 OR8U8P0C7N1 319 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 UBTFL1P0CB47 393 aaPredicted RBP0.73□□□□□ -2.29
HIF1A-204ENST00000539097 CYBAP13498 195 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF17P17021 662 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 CTRB1P17538 263 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 NBL1P41271 181 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 CRATP43155 626 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 CLDN6P56747 220 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF121P58317 390 aaPredicted RBP0.73□□□□□ -2.29
HIF1A-204ENST00000539097 DNAJC3Q13217 504 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 ATP6AP1Q15904 470 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 MARCH8Q5T0T0 291 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 CTRB2Q6GPI1 263 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 SCYL2Q6P3W7 929 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 TMPRSS11AQ6ZMR5 421 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 TMCO2Q7Z6W1 182 aaPredicted RBP0.73□□□□□ -2.29
HIF1A-204ENST00000539097 PIANPQ8IYJ0 282 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 LRRC34Q8IZ02 419 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 CCNYL1Q8N7R7 359 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 STXBP6Q8NFX7 210 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 OR2L2Q8NH16 312 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF564Q8TBZ8 553 aaPredicted RBP0.73□□□□□ -2.29
HIF1A-204ENST00000539097 CDKL2Q92772 493 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 RPEQ96AT9 228 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 C10orf35Q96D05 121 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 IMMP1LQ96LU5 166 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 RILPQ96NA2 401 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF317Q96PQ6 595 aaPredicted RBP0.73□□□□□ -2.29
HIF1A-204ENST00000539097 MBOAT4Q96T53 435 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 NXF5Q9H1B4 397 aaKnown RBP0.73□□□□□ -2.29
HIF1A-204ENST00000539097 Q9H3A6 140 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 PRORYQ9H606 182 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 TMEM185BQ9H7F4 350 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 CAB39LQ9H9S4 337 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 FAM49BQ9NUQ9 324 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 DDX19AQ9NUU7 478 aaKnown RBP0.73□□□□□ -2.29
HIF1A-204ENST00000539097 ADA2Q9NZK5 511 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 CYB5R1Q9UHQ9 305 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 KIF1AQ12756 1690 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 TIAM1Q13009 1591 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 C10orf71Q711Q0 1435 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 C2orf16Q68DN1 1984 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 CNTNAP1P78357 1384 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 ERVV-1B6SEH8 477 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 K7EMT4 169 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms