RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 LYZL6O75951 148 aa13.5□□□□□ -0.25
VAMP1-207ENST00000539047 HLA-DPB1P04440 258 aa13.5□□□□□ -0.25
VAMP1-207ENST00000539047 CD1AP06126 327 aa13.5□□□□□ -0.25
VAMP1-207ENST00000539047 TGFBR2P37173 567 aa13.5□□□□□ -0.25
VAMP1-207ENST00000539047 HTR5AP47898 357 aa13.5□□□□□ -0.25
VAMP1-207ENST00000539047 PSMA6P60900 246 aaKnown RBP13.5□□□□□ -0.25
VAMP1-207ENST00000539047 HIST1H3AP68431 136 aa13.5□□□□□ -0.25
VAMP1-207ENST00000539047 TBRG1Q3YBR2 411 aa13.5□□□□□ -0.25
VAMP1-207ENST00000539047 HIST2H3PS2Q5TEC6 136 aa13.5□□□□□ -0.25
VAMP1-207ENST00000539047 MTFR2Q6P444 385 aa13.5□□□□□ -0.25
VAMP1-207ENST00000539047 GDPGP1Q6ZNW5 385 aa13.5□□□□□ -0.25
VAMP1-207ENST00000539047 HIST2H3AQ71DI3 136 aa13.5□□□□□ -0.25
VAMP1-207ENST00000539047 ZNF676Q8N7Q3 588 aa13.5□□□□□ -0.25
VAMP1-207ENST00000539047 ZNF610Q8N9Z0 462 aa13.5□□□□□ -0.25
VAMP1-207ENST00000539047 NAXEQ8NCW5 288 aa13.5□□□□□ -0.25
VAMP1-207ENST00000539047 OR5AK2Q8NH90 309 aa13.5□□□□□ -0.25
VAMP1-207ENST00000539047 ISOC1Q96CN7 298 aa13.5□□□□□ -0.25
VAMP1-207ENST00000539047 KCNJ15Q99712 375 aa13.5□□□□□ -0.25
VAMP1-207ENST00000539047 TMED9Q9BVK6 235 aa13.5□□□□□ -0.25
VAMP1-207ENST00000539047 HDHD5Q9BXW7 423 aa13.5□□□□□ -0.25
VAMP1-207ENST00000539047 OR2H1Q9GZK4 316 aa13.5□□□□□ -0.25
VAMP1-207ENST00000539047 OBP2BQ9NPH6 170 aa13.5□□□□□ -0.25
VAMP1-207ENST00000539047 COQ3Q9NZJ6 369 aa13.5□□□□□ -0.25
VAMP1-207ENST00000539047 SLC5A6Q9Y289 635 aa13.5□□□□□ -0.25
VAMP1-207ENST00000539047 GSTK1Q9Y2Q3 226 aa13.5□□□□□ -0.25
VAMP1-207ENST00000539047 GRIP1Q9Y3R0 1128 aa13.5□□□□□ -0.25
VAMP1-207ENST00000539047 CEPT1Q9Y6K0 416 aa13.5□□□□□ -0.25
VAMP1-207ENST00000539047 INTS1Q8N201 2190 aaKnown RBP13.49□□□□□ -0.25
VAMP1-207ENST00000539047 A0A0G2JNJ9 132 aa13.49□□□□□ -0.25
VAMP1-207ENST00000539047 LOC100506127A0A0U1RQW1 187 aa13.49□□□□□ -0.25
VAMP1-207ENST00000539047 TMEM269A0A1B0GVZ9 245 aa13.49□□□□□ -0.25
VAMP1-207ENST00000539047 PRR32B1ATL7 298 aa13.49□□□□□ -0.25
VAMP1-207ENST00000539047 H3BSA7 217 aa13.49□□□□□ -0.25
VAMP1-207ENST00000539047 CCL21O00585 134 aa13.49□□□□□ -0.25
VAMP1-207ENST00000539047 SLC22A1O15245 554 aa13.49□□□□□ -0.25
VAMP1-207ENST00000539047 RGS9O75916 674 aaPredicted RBP13.49□□□□□ -0.25
VAMP1-207ENST00000539047 GABARAPO95166 117 aa13.49□□□□□ -0.25
VAMP1-207ENST00000539047 WNT11O96014 354 aa13.49□□□□□ -0.25
VAMP1-207ENST00000539047 LALBAP00709 142 aa13.49□□□□□ -0.25
VAMP1-207ENST00000539047 CGAP01215 116 aa13.49□□□□□ -0.25
VAMP1-207ENST00000539047 PAX7P23759 505 aa13.49□□□□□ -0.25
VAMP1-207ENST00000539047 GADD45AP24522 165 aa13.49□□□□□ -0.25
VAMP1-207ENST00000539047 SLC6A9P48067 706 aa13.49□□□□□ -0.25
VAMP1-207ENST00000539047 CX3CR1P49238 355 aa13.49□□□□□ -0.25
VAMP1-207ENST00000539047 CCR9P51686 369 aa13.49□□□□□ -0.25
VAMP1-207ENST00000539047 GTF2A1P52655 376 aaPredicted RBP13.49□□□□□ -0.25
VAMP1-207ENST00000539047 TPTEP56180 551 aa13.49□□□□□ -0.25
VAMP1-207ENST00000539047 GALK2Q01415 458 aa13.49□□□□□ -0.25
VAMP1-207ENST00000539047 SSX1Q16384 188 aa13.49□□□□□ -0.25
VAMP1-207ENST00000539047 GSG1Q2KHT4 349 aa13.49□□□□□ -0.25
VAMP1-207ENST00000539047 DMKNQ6E0U4 476 aaPredicted RBP13.49□□□□□ -0.25
VAMP1-207ENST00000539047 FDX2Q6P4F2 183 aa13.49□□□□□ -0.25
VAMP1-207ENST00000539047 ZNF704Q6ZNC4 412 aaPredicted RBP13.49□□□□□ -0.25
VAMP1-207ENST00000539047 BHLHA15Q7RTS1 189 aaPredicted RBP13.49□□□□□ -0.25
VAMP1-207ENST00000539047 CXorf67Q86X51 503 aaPredicted RBP13.49□□□□□ -0.25
VAMP1-207ENST00000539047 GABRG1Q8N1C3 465 aa13.49□□□□□ -0.25
VAMP1-207ENST00000539047 ZNF843Q8N446 348 aa13.49□□□□□ -0.25
VAMP1-207ENST00000539047 ZNF433Q8N7K0 673 aaPredicted RBP13.49□□□□□ -0.25
VAMP1-207ENST00000539047 KBTBD8Q8NFY9 601 aa13.49□□□□□ -0.25
VAMP1-207ENST00000539047 OR2G2Q8NGZ5 317 aa13.49□□□□□ -0.25
VAMP1-207ENST00000539047 OR1F12Q8NHA8 337 aa13.49□□□□□ -0.25
VAMP1-207ENST00000539047 BCL2L2Q92843 193 aaPredicted RBP13.49□□□□□ -0.25
VAMP1-207ENST00000539047 LRRC46Q96FV0 321 aa13.49□□□□□ -0.25
VAMP1-207ENST00000539047 DMRTA2Q96SC8 542 aa13.49□□□□□ -0.25
VAMP1-207ENST00000539047 CHCHD6Q9BRQ6 235 aa13.49□□□□□ -0.25
VAMP1-207ENST00000539047 RBM38Q9H0Z9 239 aaKnown RBP13.49□□□□□ -0.25
VAMP1-207ENST00000539047 Q9UFV3 132 aa13.49□□□□□ -0.25
VAMP1-207ENST00000539047 ST6GALNAC2Q9UJ37 374 aa13.49□□□□□ -0.25
VAMP1-207ENST00000539047 AMDHD2Q9Y303 409 aa13.49□□□□□ -0.25
VAMP1-207ENST00000539047 BOD1L1Q8NFC6 3051 aa13.49□□□□□ -0.25
VAMP1-207ENST00000539047 A0A1B0GUH1 482 aa13.48□□□□□ -0.25
VAMP1-207ENST00000539047 ACOD1A6NK06 481 aa13.48□□□□□ -0.25
VAMP1-207ENST00000539047 E9PI62 339 aa13.48□□□□□ -0.25
VAMP1-207ENST00000539047 ANXA2P07355 339 aaKnown RBP13.48□□□□□ -0.25
VAMP1-207ENST00000539047 UBCP0CG48 685 aaKnown RBP13.48□□□□□ -0.25
VAMP1-207ENST00000539047 COX5BP10606 129 aa13.48□□□□□ -0.25
VAMP1-207ENST00000539047 GALP22466 123 aa13.48□□□□□ -0.25
VAMP1-207ENST00000539047 MAPK3P27361 379 aaPredicted RBP13.48□□□□□ -0.25
VAMP1-207ENST00000539047 MMP16P51512 607 aa13.48□□□□□ -0.25
VAMP1-207ENST00000539047 FOXG1P55316 489 aaPredicted RBP13.48□□□□□ -0.25
VAMP1-207ENST00000539047 RPS25P62851 125 aaKnown RBP13.48□□□□□ -0.25
VAMP1-207ENST00000539047 GABRA6Q16445 453 aa13.48□□□□□ -0.25
VAMP1-207ENST00000539047 HIKESHIQ53FT3 197 aa13.48□□□□□ -0.25
VAMP1-207ENST00000539047 CCDC92Q53HC0 331 aaPredicted RBP13.48□□□□□ -0.25
VAMP1-207ENST00000539047 YIF1BQ5BJH7 314 aa13.48□□□□□ -0.25
VAMP1-207ENST00000539047 PABPC1L2AQ5JQF8 200 aa13.48□□□□□ -0.25
VAMP1-207ENST00000539047 C1QTNF12Q5T7M4 302 aa13.48□□□□□ -0.25
VAMP1-207ENST00000539047 ZNF774Q6NX45 483 aa13.48□□□□□ -0.25
VAMP1-207ENST00000539047 PAMR1Q6UXH9 720 aa13.48□□□□□ -0.25
VAMP1-207ENST00000539047 LUZP2Q86TE4 346 aa13.48□□□□□ -0.25
VAMP1-207ENST00000539047 OR10S1Q8NGN2 331 aa13.48□□□□□ -0.25
VAMP1-207ENST00000539047 AKR7LQ8NHP1 331 aa13.48□□□□□ -0.25
VAMP1-207ENST00000539047 C4orf45Q96LM5 186 aa13.48□□□□□ -0.25
VAMP1-207ENST00000539047 DOK1Q99704 481 aa13.48□□□□□ -0.25
VAMP1-207ENST00000539047 USB1Q9BQ65 265 aaKnown RBP13.48□□□□□ -0.25
VAMP1-207ENST00000539047 PNRC2Q9NPJ4 139 aaKnown RBP13.48□□□□□ -0.25
VAMP1-207ENST00000539047 OR52A1Q9UKL2 312 aa13.48□□□□□ -0.25
VAMP1-207ENST00000539047 ZNF281Q9Y2X9 895 aa13.48□□□□□ -0.25
VAMP1-207ENST00000539047 ARPC4-TTLL3A0A0A6YYG9 625 aa13.47□□□□□ -0.25
VAMP1-207ENST00000539047 F5H5K5 113 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms