RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 BAIAP2Q9UQB8 552 aa9.83□□□□□ -0.84
RTN3-209ENST00000538995 GRIP1Q9Y3R0 1128 aa9.83□□□□□ -0.84
RTN3-209ENST00000538995 SAMHD1Q9Y3Z3 626 aaKnown RBP9.83□□□□□ -0.84
RTN3-209ENST00000538995 FBN1P35555 2871 aaKnown RBP9.83□□□□□ -0.84
RTN3-209ENST00000538995 MALRD1Q5VYJ5 2156 aa9.82□□□□□ -0.84
RTN3-209ENST00000538995 OR6C68A6NDL8 312 aa9.82□□□□□ -0.84
RTN3-209ENST00000538995 ARRDC5A6NEK1 342 aa9.82□□□□□ -0.84
RTN3-209ENST00000538995 AQP12BA6NM10 295 aa9.82□□□□□ -0.84
RTN3-209ENST00000538995 ACOT8O14734 319 aa9.82□□□□□ -0.84
RTN3-209ENST00000538995 SPRY3O43610 288 aa9.82□□□□□ -0.84
RTN3-209ENST00000538995 CDC14BO60729 498 aa9.82□□□□□ -0.84
RTN3-209ENST00000538995 RAC2P15153 192 aa9.82□□□□□ -0.84
RTN3-209ENST00000538995 TNFSF4P23510 183 aa9.82□□□□□ -0.84
RTN3-209ENST00000538995 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.82□□□□□ -0.84
RTN3-209ENST00000538995 CDK5R2Q13319 367 aa9.82□□□□□ -0.84
RTN3-209ENST00000538995 TSTQ16762 297 aaKnown RBP9.82□□□□□ -0.84
RTN3-209ENST00000538995 MEP1BQ16820 701 aa9.82□□□□□ -0.84
RTN3-209ENST00000538995 MICAQ29983 383 aa9.82□□□□□ -0.84
RTN3-209ENST00000538995 CR1LQ2VPA4 569 aa9.82□□□□□ -0.84
RTN3-209ENST00000538995 KRTAP27-1Q3LI81 207 aa9.82□□□□□ -0.84
RTN3-209ENST00000538995 DNAL1Q4LDG9 190 aa9.82□□□□□ -0.84
RTN3-209ENST00000538995 CLEC12AQ5QGZ9 265 aa9.82□□□□□ -0.84
RTN3-209ENST00000538995 SLC18B1Q6NT16 456 aa9.82□□□□□ -0.84
RTN3-209ENST00000538995 CD300LDQ6UXZ3 194 aa9.82□□□□□ -0.84
RTN3-209ENST00000538995 FBXW12Q6X9E4 464 aa9.82□□□□□ -0.84
RTN3-209ENST00000538995 TRPM8Q7Z2W7 1104 aa9.82□□□□□ -0.84
RTN3-209ENST00000538995 GLCCI1Q86VQ1 547 aa9.82□□□□□ -0.84
RTN3-209ENST00000538995 AQP12AQ8IXF9 295 aa9.82□□□□□ -0.84
RTN3-209ENST00000538995 LNX2Q8N448 690 aa9.82□□□□□ -0.84
RTN3-209ENST00000538995 AQP11Q8NBQ7 271 aa9.82□□□□□ -0.84
RTN3-209ENST00000538995 OR52E2Q8NGJ4 325 aa9.82□□□□□ -0.84
RTN3-209ENST00000538995 OR2T4Q8NH00 348 aa9.82□□□□□ -0.84
RTN3-209ENST00000538995 PTP4A1Q93096 173 aa9.82□□□□□ -0.84
RTN3-209ENST00000538995 APOBEC3DQ96AK3 386 aaPredicted RBP9.82□□□□□ -0.84
RTN3-209ENST00000538995 HAVCR1Q96D42 359 aa9.82□□□□□ -0.84
RTN3-209ENST00000538995 RAB39BQ96DA2 213 aa9.82□□□□□ -0.84
RTN3-209ENST00000538995 SRA1Q9HD15 236 aaKnown RBP9.82□□□□□ -0.84
RTN3-209ENST00000538995 TBC1D23Q9NUY8 699 aa9.82□□□□□ -0.84
RTN3-209ENST00000538995 CYB5R1Q9UHQ9 305 aa9.82□□□□□ -0.84
RTN3-209ENST00000538995 STARD10Q9Y365 291 aa9.82□□□□□ -0.84
RTN3-209ENST00000538995 CUBNO60494 3623 aa9.82□□□□□ -0.84
RTN3-209ENST00000538995 SURF4O15260 269 aa9.81□□□□□ -0.84
RTN3-209ENST00000538995 UBOX5O94941 541 aa9.81□□□□□ -0.84
RTN3-209ENST00000538995 GPANK1O95872 356 aa9.81□□□□□ -0.84
RTN3-209ENST00000538995 GASTP01350 101 aa9.81□□□□□ -0.84
RTN3-209ENST00000538995 MSMBP08118 114 aa9.81□□□□□ -0.84
RTN3-209ENST00000538995 DBHP09172 617 aa9.81□□□□□ -0.84
RTN3-209ENST00000538995 ANPEPP15144 967 aa9.81□□□□□ -0.84
RTN3-209ENST00000538995 GGT2P36268 569 aa9.81□□□□□ -0.84
RTN3-209ENST00000538995 LMO4P61968 165 aa9.81□□□□□ -0.84
RTN3-209ENST00000538995 TNFAIP6P98066 277 aaPredicted RBP9.81□□□□□ -0.84
RTN3-209ENST00000538995 SLC35F1Q5T1Q4 408 aa9.81□□□□□ -0.84
RTN3-209ENST00000538995 OTPQ5XKR4 325 aa9.81□□□□□ -0.84
RTN3-209ENST00000538995 COLCA1Q6ZS62 124 aa9.81□□□□□ -0.84
RTN3-209ENST00000538995 CXXC5Q7LFL8 322 aaKnown RBP9.81□□□□□ -0.84
RTN3-209ENST00000538995 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.81□□□□□ -0.84
RTN3-209ENST00000538995 OR2T33Q8NG76 320 aa9.81□□□□□ -0.84
RTN3-209ENST00000538995 OR8D4Q8NGM9 314 aa9.81□□□□□ -0.84
RTN3-209ENST00000538995 OR2AJ1Q8NGZ0 328 aa9.81□□□□□ -0.84
RTN3-209ENST00000538995 OR51F2Q8NH61 342 aa9.81□□□□□ -0.84
RTN3-209ENST00000538995 SLC7A6Q92536 515 aa9.81□□□□□ -0.84
RTN3-209ENST00000538995 RAB1CQ92928 201 aa9.81□□□□□ -0.84
RTN3-209ENST00000538995 CMBLQ96DG6 245 aa9.81□□□□□ -0.84
RTN3-209ENST00000538995 DDOQ99489 341 aa9.81□□□□□ -0.84
RTN3-209ENST00000538995 MDFIQ99750 246 aa9.81□□□□□ -0.84
RTN3-209ENST00000538995 ATF6BQ99941 703 aa9.81□□□□□ -0.84
RTN3-209ENST00000538995 CDADC1Q9BWV3 514 aa9.81□□□□□ -0.84
RTN3-209ENST00000538995 C1QTNF5Q9BXJ0 243 aa9.81□□□□□ -0.84
RTN3-209ENST00000538995 PLA2G12AQ9BZM1 189 aa9.81□□□□□ -0.84
RTN3-209ENST00000538995 POFUT1Q9H488 388 aa9.81□□□□□ -0.84
RTN3-209ENST00000538995 NARFLQ9H6Q4 476 aa9.81□□□□□ -0.84
RTN3-209ENST00000538995 MSL2Q9HCI7 577 aa9.81□□□□□ -0.84
RTN3-209ENST00000538995 VNN3Q9NY84 501 aa9.81□□□□□ -0.84
RTN3-209ENST00000538995 TMEFF2Q9UIK5 374 aaPredicted RBP9.81□□□□□ -0.84
RTN3-209ENST00000538995 WIPI2Q9Y4P8 454 aa9.81□□□□□ -0.84
RTN3-209ENST00000538995 TRAV20A0A0B4J274 112 aa9.8□□□□□ -0.84
RTN3-209ENST00000538995 DHRS12A0PJE2 317 aa9.8□□□□□ -0.84
RTN3-209ENST00000538995 WNT9BO14905 357 aa9.8□□□□□ -0.84
RTN3-209ENST00000538995 HLA-DQA2P01906 255 aa9.8□□□□□ -0.84
RTN3-209ENST00000538995 TNFRSF1AP19438 455 aa9.8□□□□□ -0.84
RTN3-209ENST00000538995 SLC25A1P53007 311 aa9.8□□□□□ -0.84
RTN3-209ENST00000538995 SLC27A4Q6P1M0 643 aa9.8□□□□□ -0.84
RTN3-209ENST00000538995 CORO6Q6QEF8 472 aa9.8□□□□□ -0.84
RTN3-209ENST00000538995 CFAP77Q6ZQR2 320 aa9.8□□□□□ -0.84
RTN3-209ENST00000538995 PEG10Q86TG7 708 aaKnown RBP9.8□□□□□ -0.84
RTN3-209ENST00000538995 ADGRG5Q8IZF4 528 aa9.8□□□□□ -0.84
RTN3-209ENST00000538995 PROKR2Q8NFJ6 384 aa9.8□□□□□ -0.84
RTN3-209ENST00000538995 OR10G2Q8NGC3 310 aa9.8□□□□□ -0.84
RTN3-209ENST00000538995 SPATA3Q8NHX4 192 aa9.8□□□□□ -0.84
RTN3-209ENST00000538995 BCAS4Q8TDM0 211 aa9.8□□□□□ -0.84
RTN3-209ENST00000538995 CCL17Q92583 94 aa9.8□□□□□ -0.84
RTN3-209ENST00000538995 TMEM186Q96B77 213 aa9.8□□□□□ -0.84
RTN3-209ENST00000538995 CLPTM1LQ96KA5 538 aa9.8□□□□□ -0.84
RTN3-209ENST00000538995 PITX2Q99697 317 aa9.8□□□□□ -0.84
RTN3-209ENST00000538995 THTPAQ9BU02 230 aa9.8□□□□□ -0.84
RTN3-209ENST00000538995 CHID1Q9BWS9 393 aa9.8□□□□□ -0.84
RTN3-209ENST00000538995 TSSK6Q9BXA6 273 aa9.8□□□□□ -0.84
RTN3-209ENST00000538995 FN3KQ9H479 309 aa9.8□□□□□ -0.84
RTN3-209ENST00000538995 ZNF665Q9H7R5 613 aa9.8□□□□□ -0.84
RTN3-209ENST00000538995 PNRC2Q9NPJ4 139 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms