RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 OR2V1Q8NHB1 315 aa15.29■□□□□ 0.04
SCARB1-205ENST00000538291 ZDHHC16Q969W1 377 aa15.29■□□□□ 0.04
SCARB1-205ENST00000538291 TXNIPQ9H3M7 391 aa15.29■□□□□ 0.04
SCARB1-205ENST00000538291 BHLHE40O14503 412 aa15.29■□□□□ 0.04
SCARB1-205ENST00000538291 FCMRO60667 390 aa15.29■□□□□ 0.04
SCARB1-205ENST00000538291 BSGP35613 385 aa15.29■□□□□ 0.04
SCARB1-205ENST00000538291 UBE2G1P62253 170 aa15.29■□□□□ 0.04
SCARB1-205ENST00000538291 EIF3IQ13347 325 aaKnown RBP15.29■□□□□ 0.04
SCARB1-205ENST00000538291 PCK2Q16822 640 aa15.29■□□□□ 0.04
SCARB1-205ENST00000538291 OR2A2Q6IF42 318 aa15.29■□□□□ 0.04
SCARB1-205ENST00000538291 TMEM99Q8N816 258 aa15.29■□□□□ 0.04
SCARB1-205ENST00000538291 REEP6Q96HR9 211 aa15.29■□□□□ 0.04
SCARB1-205ENST00000538291 GPR78Q96P69 363 aa15.29■□□□□ 0.04
SCARB1-205ENST00000538291 IL21Q9HBE4 155 aa15.29■□□□□ 0.04
SCARB1-205ENST00000538291 MED29Q9NX70 200 aa15.29■□□□□ 0.04
SCARB1-205ENST00000538291 KIAA0100Q14667 2235 aaKnown RBP15.29■□□□□ 0.04
SCARB1-205ENST00000538291 PRSS37A4D1T9 235 aa15.28■□□□□ 0.04
SCARB1-205ENST00000538291 CT45A10P0DMU9 189 aa15.28■□□□□ 0.04
SCARB1-205ENST00000538291 PIGAP37287 484 aa15.28■□□□□ 0.04
SCARB1-205ENST00000538291 SRP9P49458 86 aaKnown RBP15.28■□□□□ 0.04
SCARB1-205ENST00000538291 SUMO3P55854 103 aaPredicted RBP15.28■□□□□ 0.04
SCARB1-205ENST00000538291 FLI1Q01543 452 aaPredicted RBP15.28■□□□□ 0.04
SCARB1-205ENST00000538291 ZNF385BQ569K4 471 aa15.28■□□□□ 0.04
SCARB1-205ENST00000538291 OLIG1Q8TAK6 271 aa15.28■□□□□ 0.04
SCARB1-205ENST00000538291 MZB1Q8WU39 189 aa15.28■□□□□ 0.04
SCARB1-205ENST00000538291 HINT3Q9NQE9 182 aaKnown RBP15.28■□□□□ 0.04
SCARB1-205ENST00000538291 RGPD2P0DJD1 1756 aa15.28■□□□□ 0.04
SCARB1-205ENST00000538291 TRAV17A0A0B4J275 112 aa15.28■□□□□ 0.04
SCARB1-205ENST00000538291 WDR1O75083 606 aa15.28■□□□□ 0.04
SCARB1-205ENST00000538291 ZNF26P17031 533 aaPredicted RBP15.28■□□□□ 0.04
SCARB1-205ENST00000538291 DUSP1P28562 367 aa15.28■□□□□ 0.04
SCARB1-205ENST00000538291 FABP6P51161 128 aa15.28■□□□□ 0.04
SCARB1-205ENST00000538291 SKA3Q8IX90 412 aa15.28■□□□□ 0.04
SCARB1-205ENST00000538291 FAM26EQ8N5C1 309 aa15.28■□□□□ 0.04
SCARB1-205ENST00000538291 ZNF321PQ8N8H1 164 aa15.28■□□□□ 0.04
SCARB1-205ENST00000538291 OR51S1Q8NGJ8 323 aa15.28■□□□□ 0.04
SCARB1-205ENST00000538291 POFUT1Q9H488 388 aa15.28■□□□□ 0.04
SCARB1-205ENST00000538291 SLC51BQ86UW2 128 aa15.28■□□□□ 0.04
SCARB1-205ENST00000538291 ZDHHC23Q8IYP9 409 aa15.28■□□□□ 0.04
SCARB1-205ENST00000538291 BCL2L10Q9HD36 194 aa15.28■□□□□ 0.04
SCARB1-205ENST00000538291 SLC17A4Q9Y2C5 497 aa15.28■□□□□ 0.04
SCARB1-205ENST00000538291 MYH7BA7E2Y1 1941 aa15.28■□□□□ 0.04
SCARB1-205ENST00000538291 OR2A25A4D2G3 310 aa15.28■□□□□ 0.04
SCARB1-205ENST00000538291 TSTD3H0UI37 97 aa15.28■□□□□ 0.04
SCARB1-205ENST00000538291 M0QZ24 198 aa15.28■□□□□ 0.04
SCARB1-205ENST00000538291 FABP7O15540 132 aa15.28■□□□□ 0.04
SCARB1-205ENST00000538291 ALOX5APP20292 161 aa15.28■□□□□ 0.04
SCARB1-205ENST00000538291 PTBP1P26599 531 aaKnown RBP eCLIP15.28■□□□□ 0.045e-7■■■■■ 52.1
SCARB1-205ENST00000538291 ARRB2P32121 409 aa15.28■□□□□ 0.04
SCARB1-205ENST00000538291 MRPS24Q96EL2 167 aaKnown RBP15.28■□□□□ 0.04
SCARB1-205ENST00000538291 GABRG2P18507 467 aa15.27■□□□□ 0.04
SCARB1-205ENST00000538291 EGR3Q06889 387 aa15.27■□□□□ 0.04
SCARB1-205ENST00000538291 DOC2BQ14184 412 aa15.27■□□□□ 0.04
SCARB1-205ENST00000538291 FZD2Q14332 565 aa15.27■□□□□ 0.04
SCARB1-205ENST00000538291 GABRG1Q8N1C3 465 aa15.27■□□□□ 0.04
SCARB1-205ENST00000538291 SPACA9Q96E40 222 aaPredicted RBP15.27■□□□□ 0.04
SCARB1-205ENST00000538291 ADAM19Q9H013 955 aa15.27■□□□□ 0.04
SCARB1-205ENST00000538291 C11orf54Q9H0W9 315 aaPredicted RBP15.27■□□□□ 0.04
SCARB1-205ENST00000538291 PPP1R3CQ9UQK1 317 aa15.27■□□□□ 0.04
SCARB1-205ENST00000538291 IGHV3-15A0A0B4J1V0 119 aa15.27■□□□□ 0.04
SCARB1-205ENST00000538291 UPK1AO00322 258 aa15.27■□□□□ 0.04
SCARB1-205ENST00000538291 DHHO43323 396 aa15.27■□□□□ 0.04
SCARB1-205ENST00000538291 CTSLP07711 333 aa15.27■□□□□ 0.04
SCARB1-205ENST00000538291 LIPAP38571 399 aa15.27■□□□□ 0.04
SCARB1-205ENST00000538291 CASP3P42574 277 aa15.27■□□□□ 0.04
SCARB1-205ENST00000538291 RPS16P62249 146 aaKnown RBP15.27■□□□□ 0.04
SCARB1-205ENST00000538291 Q6ZS52 159 aa15.27■□□□□ 0.04
SCARB1-205ENST00000538291 SSX9Q7RTT3 188 aa15.27■□□□□ 0.04
SCARB1-205ENST00000538291 OR2AK2Q8NG84 335 aa15.27■□□□□ 0.04
SCARB1-205ENST00000538291 OR13C8Q8NGS7 320 aa15.27■□□□□ 0.04
SCARB1-205ENST00000538291 LRRC61Q9BV99 259 aa15.27■□□□□ 0.04
SCARB1-205ENST00000538291 COMMD5Q9GZQ3 224 aa15.27■□□□□ 0.04
SCARB1-205ENST00000538291 RAB19A4D1S5 217 aa15.27■□□□□ 0.04
SCARB1-205ENST00000538291 TFAP2AP05549 437 aa15.27■□□□□ 0.04
SCARB1-205ENST00000538291 ZNF85Q03923 595 aa15.27■□□□□ 0.04
SCARB1-205ENST00000538291 FCN2Q15485 313 aa15.27■□□□□ 0.04
SCARB1-205ENST00000538291 RGS7BPQ6MZT1 257 aaPredicted RBP15.27■□□□□ 0.04
SCARB1-205ENST00000538291 OR2A1Q8NGT9 310 aa15.27■□□□□ 0.04
SCARB1-205ENST00000538291 DLL4Q9NR61 685 aa15.27■□□□□ 0.04
SCARB1-205ENST00000538291 PLCH1Q4KWH8 1693 aa15.27■□□□□ 0.03
SCARB1-205ENST00000538291 ZC3H12DA2A288 527 aaKnown RBP15.27■□□□□ 0.03
SCARB1-205ENST00000538291 PCSK6P29122 969 aa15.27■□□□□ 0.03
SCARB1-205ENST00000538291 ZNF2Q9BSG1 426 aaPredicted RBP15.27■□□□□ 0.03
SCARB1-205ENST00000538291 NPAP1Q9NZP6 1156 aa15.27■□□□□ 0.03
SCARB1-205ENST00000538291 SLC23A1Q9UHI7 598 aa15.27■□□□□ 0.03
SCARB1-205ENST00000538291 HSPB2A8KAH6 182 aa15.27■□□□□ 0.03
SCARB1-205ENST00000538291 ARPC3O15145 178 aa15.27■□□□□ 0.03
SCARB1-205ENST00000538291 HSPB2Q16082 182 aa15.27■□□□□ 0.03
SCARB1-205ENST00000538291 FLVCR1Q9Y5Y0 555 aa15.27■□□□□ 0.03
SCARB1-205ENST00000538291 C5P01031 1676 aa15.26■□□□□ 0.03
SCARB1-205ENST00000538291 ELLP55199 621 aaPredicted RBP15.26■□□□□ 0.03
SCARB1-205ENST00000538291 TRA2AQ13595 282 aaKnown RBP eCLIP15.26■□□□□ 0.03
SCARB1-205ENST00000538291 ADIRFQ15847 76 aa15.26■□□□□ 0.03
SCARB1-205ENST00000538291 WSB2Q9NYS7 404 aaPredicted RBP15.26■□□□□ 0.03
SCARB1-205ENST00000538291 LINC01387J3KSC0 135 aa15.26■□□□□ 0.03
SCARB1-205ENST00000538291 SCGB1D1O95968 90 aa15.26■□□□□ 0.03
SCARB1-205ENST00000538291 ADRA2CP18825 462 aa15.26■□□□□ 0.03
SCARB1-205ENST00000538291 TRILQ7L0X0 811 aa15.26■□□□□ 0.03
SCARB1-205ENST00000538291 BAGE3Q86Y29 109 aa15.26■□□□□ 0.03
SCARB1-205ENST00000538291 BAGE2Q86Y30 109 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms