RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 TTC29Q8NA56 475 aaPredicted RBP2.61□□□□□ -1.99
PRKDC-205ENST00000535375 OR56A4Q8NGH8 313 aa2.61□□□□□ -1.99
PRKDC-205ENST00000535375 OR4S2Q8NH73 311 aa2.61□□□□□ -1.99
PRKDC-205ENST00000535375 NUBPLQ8TB37 319 aa2.61□□□□□ -1.99
PRKDC-205ENST00000535375 GPX8Q8TED1 209 aa2.61□□□□□ -1.99
PRKDC-205ENST00000535375 ZNF707Q96C28 371 aaPredicted RBP2.61□□□□□ -1.99
PRKDC-205ENST00000535375 COL21A1Q96P44 957 aa2.61□□□□□ -1.99
PRKDC-205ENST00000535375 OPALINQ96PE5 141 aa2.61□□□□□ -1.99
PRKDC-205ENST00000535375 BCL7BQ9BQE9 202 aa2.61□□□□□ -1.99
PRKDC-205ENST00000535375 UCK2Q9BZX2 261 aa2.61□□□□□ -1.99
PRKDC-205ENST00000535375 RPP21Q9H633 154 aaKnown RBP2.61□□□□□ -1.99
PRKDC-205ENST00000535375 RPRD1BQ9NQG5 326 aaKnown RBP2.61□□□□□ -1.99
PRKDC-205ENST00000535375 ZNRD1Q9P1U0 126 aa2.61□□□□□ -1.99
PRKDC-205ENST00000535375 ST3GAL6Q9Y274 331 aa2.61□□□□□ -1.99
PRKDC-205ENST00000535375 RFNGQ9Y644 331 aa2.61□□□□□ -1.99
PRKDC-205ENST00000535375 TMEM14AQ9Y6G1 99 aa2.61□□□□□ -1.99
PRKDC-205ENST00000535375 MUC19Q7Z5P9 8384 aa2.61□□□□□ -1.99
PRKDC-205ENST00000535375 SMKR1H3BMG3 65 aa2.6□□□□□ -1.99
PRKDC-205ENST00000535375 KMOO15229 486 aa2.6□□□□□ -1.99
PRKDC-205ENST00000535375 NUPL2O15504 423 aaKnown RBP2.6□□□□□ -1.99
PRKDC-205ENST00000535375 SLC25A14O95258 325 aaPredicted RBP2.6□□□□□ -1.99
PRKDC-205ENST00000535375 FGFR1OPO95684 399 aaKnown RBP2.6□□□□□ -1.99
PRKDC-205ENST00000535375 HLA-HP01893 362 aa2.6□□□□□ -1.99
PRKDC-205ENST00000535375 IGKV4-1P06312 121 aa2.6□□□□□ -1.99
PRKDC-205ENST00000535375 GNAO1P09471 354 aa2.6□□□□□ -1.99
PRKDC-205ENST00000535375 CELP19835 753 aa2.6□□□□□ -1.99
PRKDC-205ENST00000535375 EIF2S2P20042 333 aaKnown RBP2.6□□□□□ -1.99
PRKDC-205ENST00000535375 TUBG1P23258 451 aa2.6□□□□□ -1.99
PRKDC-205ENST00000535375 OR1E1P30953 314 aa2.6□□□□□ -1.99
PRKDC-205ENST00000535375 ZNF138P52744 262 aa2.6□□□□□ -1.99
PRKDC-205ENST00000535375 STXBP1P61764 594 aaKnown RBP2.6□□□□□ -1.99
PRKDC-205ENST00000535375 CACNG7P62955 275 aa2.6□□□□□ -1.99
PRKDC-205ENST00000535375 ERCC8Q13216 396 aa2.6□□□□□ -1.99
PRKDC-205ENST00000535375 NCF4Q15080 339 aa2.6□□□□□ -1.99
PRKDC-205ENST00000535375 HIKESHIQ53FT3 197 aa2.6□□□□□ -1.99
PRKDC-205ENST00000535375 UBE2UQ5VVX9 321 aa2.6□□□□□ -1.99
PRKDC-205ENST00000535375 ZNF493Q6ZR52 646 aa2.6□□□□□ -1.99
PRKDC-205ENST00000535375 CALHM3Q86XJ0 350 aa2.6□□□□□ -1.99
PRKDC-205ENST00000535375 OR52P1PQ8NH57 321 aa2.6□□□□□ -1.99
PRKDC-205ENST00000535375 RGP1Q92546 391 aaPredicted RBP2.6□□□□□ -1.99
PRKDC-205ENST00000535375 FAM3DQ96BQ1 224 aa2.6□□□□□ -1.99
PRKDC-205ENST00000535375 OR5B12Q96R08 314 aa2.6□□□□□ -1.99
PRKDC-205ENST00000535375 ULBP2Q9BZM5 246 aa2.6□□□□□ -1.99
PRKDC-205ENST00000535375 ZYG11BQ9C0D3 744 aa2.6□□□□□ -1.99
PRKDC-205ENST00000535375 SPNS1Q9H2V7 528 aa2.6□□□□□ -1.99
PRKDC-205ENST00000535375 TDRD3Q9H7E2 651 aaKnown RBP2.6□□□□□ -1.99
PRKDC-205ENST00000535375 RETNQ9HD89 108 aa2.6□□□□□ -1.99
PRKDC-205ENST00000535375 CCNB1IP1Q9NPC3 277 aa2.6□□□□□ -1.99
PRKDC-205ENST00000535375 TUBG2Q9NRH3 451 aa2.6□□□□□ -1.99
PRKDC-205ENST00000535375 MRPL22Q9NWU5 206 aaKnown RBP2.6□□□□□ -1.99
PRKDC-205ENST00000535375 PSG8Q9UQ74 426 aa2.6□□□□□ -1.99
PRKDC-205ENST00000535375 WIF1Q9Y5W5 379 aa2.6□□□□□ -1.99
PRKDC-205ENST00000535375 MRPS18BQ9Y676 258 aaKnown RBP2.6□□□□□ -1.99
PRKDC-205ENST00000535375 IGLV1-36A0A0B4J1U3 117 aa2.59□□□□□ -1.99
PRKDC-205ENST00000535375 A0A1B0GVX0 72 aa2.59□□□□□ -1.99
PRKDC-205ENST00000535375 ZBTB5O15062 677 aa2.59□□□□□ -1.99
PRKDC-205ENST00000535375 RRP8O43159 456 aaKnown RBP2.59□□□□□ -1.99
PRKDC-205ENST00000535375 FKBP6O75344 327 aa2.59□□□□□ -1.99
PRKDC-205ENST00000535375 FCN3O75636 299 aa2.59□□□□□ -1.99
PRKDC-205ENST00000535375 CCNB2O95067 398 aa2.59□□□□□ -1.99
PRKDC-205ENST00000535375 OXTP01178 125 aa2.59□□□□□ -1.99
PRKDC-205ENST00000535375 POLR2MP0CAP2 368 aa2.59□□□□□ -1.99
PRKDC-205ENST00000535375 NBL1P41271 181 aa2.59□□□□□ -1.99
PRKDC-205ENST00000535375 RND2P52198 227 aa2.59□□□□□ -1.99
PRKDC-205ENST00000535375 DAOAP59103 153 aa2.59□□□□□ -1.99
PRKDC-205ENST00000535375 EIF3EP60228 445 aaKnown RBP2.59□□□□□ -1.99
PRKDC-205ENST00000535375 RAB11AP62491 216 aa2.59□□□□□ -1.99
PRKDC-205ENST00000535375 RAD51Q06609 339 aa2.59□□□□□ -1.99
PRKDC-205ENST00000535375 DOC2AQ14183 400 aa2.59□□□□□ -1.99
PRKDC-205ENST00000535375 GINS1Q14691 196 aa2.59□□□□□ -1.99
PRKDC-205ENST00000535375 RAB11BQ15907 218 aa2.59□□□□□ -1.99
PRKDC-205ENST00000535375 CAVIN4Q5BKX8 364 aa2.59□□□□□ -1.99
PRKDC-205ENST00000535375 PLCXD3Q63HM9 321 aa2.59□□□□□ -1.99
PRKDC-205ENST00000535375 ABHD13Q7L211 337 aa2.59□□□□□ -1.99
PRKDC-205ENST00000535375 CBLN2Q8IUK8 224 aa2.59□□□□□ -1.99
PRKDC-205ENST00000535375 FAM184AQ8NB25 1140 aa2.59□□□□□ -1.99
PRKDC-205ENST00000535375 DNAJC1Q96KC8 554 aaKnown RBP2.59□□□□□ -1.99
PRKDC-205ENST00000535375 JSRP1Q96MG2 331 aaPredicted RBP2.59□□□□□ -1.99
PRKDC-205ENST00000535375 RNF157Q96PX1 679 aa2.59□□□□□ -1.99
PRKDC-205ENST00000535375 LZTS2Q9BRK4 669 aa2.59□□□□□ -1.99
PRKDC-205ENST00000535375 SLC7A5P2Q9GIP4 190 aa2.59□□□□□ -1.99
PRKDC-205ENST00000535375 SAMSN1Q9NSI8 373 aaKnown RBP2.59□□□□□ -1.99
PRKDC-205ENST00000535375 CLN6Q9NWW5 311 aa2.59□□□□□ -1.99
PRKDC-205ENST00000535375 RCL1Q9Y2P8 373 aaKnown RBP2.59□□□□□ -1.99
PRKDC-205ENST00000535375 SYNRGQ9UMZ2 1314 aa2.59□□□□□ -2
PRKDC-205ENST00000535375 A6NDN8 102 aa2.58□□□□□ -2
PRKDC-205ENST00000535375 NCBP2LA6PVI3 153 aaKnown RBP2.58□□□□□ -2
PRKDC-205ENST00000535375 ZNF99A8MXY4 864 aaPredicted RBP2.58□□□□□ -2
PRKDC-205ENST00000535375 M0R3G1 203 aa2.58□□□□□ -2
PRKDC-205ENST00000535375 TRDMT1O14717 391 aaKnown RBP2.58□□□□□ -2
PRKDC-205ENST00000535375 BCKDKO14874 412 aa2.58□□□□□ -2
PRKDC-205ENST00000535375 RBFOX2O43251 390 aaKnown RBP eCLIP2.58□□□□□ -2
PRKDC-205ENST00000535375 GABARAPO95166 117 aa2.58□□□□□ -2
PRKDC-205ENST00000535375 RAB3DO95716 219 aa2.58□□□□□ -2
PRKDC-205ENST00000535375 TACSTD2P09758 323 aa2.58□□□□□ -2
PRKDC-205ENST00000535375 UBTFL6P0CB48 400 aaPredicted RBP2.58□□□□□ -2
PRKDC-205ENST00000535375 UBCP0CG48 685 aaKnown RBP2.58□□□□□ -2
PRKDC-205ENST00000535375 OR5H8P0DN80 308 aa2.58□□□□□ -2
PRKDC-205ENST00000535375 CALM1P0DP23 149 aa2.58□□□□□ -2
PRKDC-205ENST00000535375 CALM2P0DP24 149 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms