RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 SHBQ15464 509 aa16.53■□□□□ 0.24
SFSWAP-203ENST00000535236 LINC01465Q8N7H1 131 aa16.53■□□□□ 0.24
SFSWAP-203ENST00000535236 BPIFCQ8NFQ6 507 aa16.53■□□□□ 0.24
SFSWAP-203ENST00000535236 ATF6BQ99941 703 aa16.53■□□□□ 0.24
SFSWAP-203ENST00000535236 TAF9BQ9HBM6 251 aa16.53■□□□□ 0.24
SFSWAP-203ENST00000535236 ACER3Q9NUN7 267 aa16.53■□□□□ 0.24
SFSWAP-203ENST00000535236 UGT2A1Q9Y4X1 527 aa16.53■□□□□ 0.24
SFSWAP-203ENST00000535236 NUMA1Q14980 2115 aa16.53■□□□□ 0.24
SFSWAP-203ENST00000535236 OR2A25A4D2G3 310 aa16.52■□□□□ 0.24
SFSWAP-203ENST00000535236 LIPAP38571 399 aa16.52■□□□□ 0.24
SFSWAP-203ENST00000535236 ZNF620Q6ZNG0 422 aa16.52■□□□□ 0.24
SFSWAP-203ENST00000535236 TRILQ7L0X0 811 aa16.52■□□□□ 0.24
SFSWAP-203ENST00000535236 MICAL3Q7RTP6 2002 aa16.52■□□□□ 0.24
SFSWAP-203ENST00000535236 TSEN54Q7Z6J9 526 aaKnown RBP16.52■□□□□ 0.24
SFSWAP-203ENST00000535236 ADGRG3Q86Y34 549 aa16.52■□□□□ 0.24
SFSWAP-203ENST00000535236 ZDHHC23Q8IYP9 409 aa16.52■□□□□ 0.24
SFSWAP-203ENST00000535236 OR52H1Q8NGJ2 320 aa16.52■□□□□ 0.24
SFSWAP-203ENST00000535236 TAAR9Q96RI9 348 aa16.52■□□□□ 0.24
SFSWAP-203ENST00000535236 MED9Q9NWA0 146 aa16.52■□□□□ 0.24
SFSWAP-203ENST00000535236 FLVCR1Q9Y5Y0 555 aa16.52■□□□□ 0.24
SFSWAP-203ENST00000535236 LINC01565O15544 149 aa16.52■□□□□ 0.24
SFSWAP-203ENST00000535236 ADRA2CP18825 462 aa16.52■□□□□ 0.24
SFSWAP-203ENST00000535236 SLC6A12P48065 614 aa16.52■□□□□ 0.24
SFSWAP-203ENST00000535236 SRP9P49458 86 aaKnown RBP16.52■□□□□ 0.24
SFSWAP-203ENST00000535236 DOC2BQ14184 412 aa16.52■□□□□ 0.24
SFSWAP-203ENST00000535236 GABRG1Q8N1C3 465 aa16.52■□□□□ 0.24
SFSWAP-203ENST00000535236 TINAGL1Q9GZM7 467 aaPredicted RBP16.52■□□□□ 0.24
SFSWAP-203ENST00000535236 S1PR5Q9H228 398 aa16.52■□□□□ 0.24
SFSWAP-203ENST00000535236 CLEC1BQ9P126 229 aa16.52■□□□□ 0.24
SFSWAP-203ENST00000535236 CCDC187A0A096LP49 1063 aa16.52■□□□□ 0.23
SFSWAP-203ENST00000535236 CCSO14618 274 aa16.52■□□□□ 0.23
SFSWAP-203ENST00000535236 HRO43593 1189 aa16.52■□□□□ 0.23
SFSWAP-203ENST00000535236 MT-ND4LP03901 98 aa16.52■□□□□ 0.23
SFSWAP-203ENST00000535236 CTRB1P17538 263 aa16.52■□□□□ 0.23
SFSWAP-203ENST00000535236 ERHP84090 104 aaKnown RBP16.52■□□□□ 0.23
SFSWAP-203ENST00000535236 SYT6Q5T7P8 510 aaPredicted RBP16.52■□□□□ 0.23
SFSWAP-203ENST00000535236 CTRB2Q6GPI1 263 aa16.52■□□□□ 0.23
SFSWAP-203ENST00000535236 OR2AK2Q8NG84 335 aa16.52■□□□□ 0.23
SFSWAP-203ENST00000535236 COMMD5Q9GZQ3 224 aa16.52■□□□□ 0.23
SFSWAP-203ENST00000535236 MYH15Q9Y2K3 1946 aa16.52■□□□□ 0.23
SFSWAP-203ENST00000535236 OR5G3P0C626 314 aa16.52■□□□□ 0.23
SFSWAP-203ENST00000535236 ETV1P50549 477 aa16.52■□□□□ 0.23
SFSWAP-203ENST00000535236 KISS1RQ969F8 398 aaPredicted RBP16.52■□□□□ 0.23
SFSWAP-203ENST00000535236 PINX1Q96BK5 328 aaKnown RBP16.52■□□□□ 0.23
SFSWAP-203ENST00000535236 DTYMKP23919 212 aa16.51■□□□□ 0.23
SFSWAP-203ENST00000535236 PHYHD1Q5SRE7 291 aa16.51■□□□□ 0.23
SFSWAP-203ENST00000535236 ASTLQ6HA08 431 aaPredicted RBP16.51■□□□□ 0.23
SFSWAP-203ENST00000535236 DLEU7Q6UYE1 221 aa16.51■□□□□ 0.23
SFSWAP-203ENST00000535236 DND1Q8IYX4 353 aaKnown RBP16.51■□□□□ 0.23
SFSWAP-203ENST00000535236 OR10G3Q8NGC4 313 aa16.51■□□□□ 0.23
SFSWAP-203ENST00000535236 DLL4Q9NR61 685 aa16.51■□□□□ 0.23
SFSWAP-203ENST00000535236 FRG2CA6NGY1 282 aa16.51■□□□□ 0.23
SFSWAP-203ENST00000535236 ARNTP27540 789 aa16.51■□□□□ 0.23
SFSWAP-203ENST00000535236 FABP6P51161 128 aa16.51■□□□□ 0.23
SFSWAP-203ENST00000535236 TAS2R45P59539 299 aa16.51■□□□□ 0.23
SFSWAP-203ENST00000535236 CCL7P80098 99 aa16.51■□□□□ 0.23
SFSWAP-203ENST00000535236 NDFIP1Q9BT67 221 aa16.51■□□□□ 0.23
SFSWAP-203ENST00000535236 LTB4R2Q9NPC1 389 aa16.51■□□□□ 0.23
SFSWAP-203ENST00000535236 MED29Q9NX70 200 aa16.51■□□□□ 0.23
SFSWAP-203ENST00000535236 SLC17A4Q9Y2C5 497 aa16.51■□□□□ 0.23
SFSWAP-203ENST00000535236 A0A087WV62 115 aa16.51■□□□□ 0.23
SFSWAP-203ENST00000535236 DIO1P49895 249 aa16.51■□□□□ 0.23
SFSWAP-203ENST00000535236 SOWAHCQ53LP3 525 aaPredicted RBP16.51■□□□□ 0.23
SFSWAP-203ENST00000535236 OR10R2Q8NGX6 335 aa16.51■□□□□ 0.23
SFSWAP-203ENST00000535236 MN1Q10571 1320 aaPredicted RBP16.51■□□□□ 0.23
SFSWAP-203ENST00000535236 PTBP1P26599 531 aaKnown RBP eCLIP16.51■□□□□ 0.23
SFSWAP-203ENST00000535236 PCK2Q16822 640 aa16.51■□□□□ 0.23
SFSWAP-203ENST00000535236 PCNPQ8WW12 178 aaKnown RBP16.51■□□□□ 0.23
SFSWAP-203ENST00000535236 BARX1Q9HBU1 254 aaPredicted RBP16.51■□□□□ 0.23
SFSWAP-203ENST00000535236 PRSS37A4D1T9 235 aa16.51■□□□□ 0.23
SFSWAP-203ENST00000535236 CBR3O75828 277 aa16.51■□□□□ 0.23
SFSWAP-203ENST00000535236 CRYABP02511 175 aaKnown RBP16.51■□□□□ 0.23
SFSWAP-203ENST00000535236 OR10K2Q6IF99 312 aa16.51■□□□□ 0.23
SFSWAP-203ENST00000535236 TMEM182Q6ZP80 229 aaPredicted RBP16.51■□□□□ 0.23
SFSWAP-203ENST00000535236 OR8U1Q8NH10 309 aa16.51■□□□□ 0.23
SFSWAP-203ENST00000535236 TECTBQ96PL2 329 aa16.51■□□□□ 0.23
SFSWAP-203ENST00000535236 PDFQ9HBH1 243 aa16.51■□□□□ 0.23
SFSWAP-203ENST00000535236 CHD2O14647 1828 aaKnown RBP16.5■□□□□ 0.23
SFSWAP-203ENST00000535236 SLC2A10O95528 541 aa16.5■□□□□ 0.23
SFSWAP-203ENST00000535236 IGFBP1P08833 259 aaPredicted RBP16.5■□□□□ 0.23
SFSWAP-203ENST00000535236 ZNF385BQ569K4 471 aa16.5■□□□□ 0.23
SFSWAP-203ENST00000535236 SPANXN5Q5MJ07 72 aa16.5■□□□□ 0.23
SFSWAP-203ENST00000535236 RGS7BPQ6MZT1 257 aaPredicted RBP16.5■□□□□ 0.23
SFSWAP-203ENST00000535236 LFNGQ8NES3 379 aa16.5■□□□□ 0.23
SFSWAP-203ENST00000535236 PKMYT1Q99640 499 aa16.5■□□□□ 0.23
SFSWAP-203ENST00000535236 LIN7CQ9NUP9 197 aaKnown RBP16.5■□□□□ 0.23
SFSWAP-203ENST00000535236 OR13C7P0DN81 318 aa16.5■□□□□ 0.23
SFSWAP-203ENST00000535236 EGR3Q06889 387 aa16.5■□□□□ 0.23
SFSWAP-203ENST00000535236 MRPL58Q14197 206 aaKnown RBP16.5■□□□□ 0.23
SFSWAP-203ENST00000535236 TMEM196Q5HYL7 178 aa16.5■□□□□ 0.23
SFSWAP-203ENST00000535236 HINT3Q9NQE9 182 aaKnown RBP16.5■□□□□ 0.23
SFSWAP-203ENST00000535236 ACVR1Q04771 509 aa16.5■□□□□ 0.23
SFSWAP-203ENST00000535236 FAM53BQ14153 422 aa16.5■□□□□ 0.23
SFSWAP-203ENST00000535236 TXNIPQ9H3M7 391 aa16.5■□□□□ 0.23
SFSWAP-203ENST00000535236 GAB2Q9UQC2 676 aa16.5■□□□□ 0.23
SFSWAP-203ENST00000535236 SCN11AQ9UI33 1791 aa16.5■□□□□ 0.23
SFSWAP-203ENST00000535236 MYH7BA7E2Y1 1941 aa16.5■□□□□ 0.23
SFSWAP-203ENST00000535236 GPR3P46089 330 aa16.5■□□□□ 0.23
SFSWAP-203ENST00000535236 HLA-BQ31612 363 aa16.5■□□□□ 0.23
SFSWAP-203ENST00000535236 RHOUQ7L0Q8 258 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms