RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 NPTNQ9Y639 398 aa8.49□□□□□ -1.05
CLSTN3-203ENST00000534830 WNK1Q9H4A3 2382 aa8.49□□□□□ -1.05
CLSTN3-203ENST00000534830 PPIAL4EA0A075B759 164 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 IGLV1-36A0A0B4J1U3 117 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 PPIAL4CA0A0B4J2A2 164 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 A0A1B0GWJ7 208 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 PPIAL4DF5H284 164 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 J3QLI3 93 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 SOCS2O14508 198 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 RER1O15258 196 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 TIMM8AO60220 97 aaPredicted RBP8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 GPANK1O95872 356 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 DBHP09172 617 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 PPIAL4FP0DN26 164 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 RAC2P15153 192 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 GSTM3P21266 225 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 RBMXP38159 391 aaKnown RBP8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 GSSP48637 474 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 ERFP50548 548 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 RPS6KA3P51812 740 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 UBA52P62987 128 aaKnown RBP8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 TNFAIP6P98066 277 aaPredicted RBP8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 HNRNPA0Q13151 305 aaKnown RBP8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 ZMAT1Q5H9K5 638 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 FGD3Q5JSP0 725 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 OTPQ5XKR4 325 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 FBXW12Q6X9E4 464 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 COLCA1Q6ZS62 124 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 C1QL2Q7Z5L3 287 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 ZBTB46Q86UZ6 589 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 PGAM4Q8N0Y7 254 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 OR6V1Q8N148 313 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 BPIFB2Q8N4F0 458 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 TEX29Q8N6K0 151 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 RNF148Q8N7C7 305 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 OR52J3Q8NH60 311 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 OR1F12Q8NHA8 337 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 COG8Q96MW5 612 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 TSSK2Q96PF2 358 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 PKP2Q99959 881 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 OR52D1Q9H346 318 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 IL1RAPQ9NPH3 570 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 KRCC1Q9NPI7 259 aaPredicted RBP8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 TMEM106BQ9NUM4 274 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 ADA2Q9NZK5 511 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 ASH2LQ9UBL3 628 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 IL19Q9UHD0 177 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 OPN4Q9UHM6 478 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 MAGEL2Q9UJ55 1249 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 AURKCQ9UQB9 309 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 PPIAL4AQ9Y536 164 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 LHFPL6Q9Y693 200 aa8.48□□□□□ -1.05
CLSTN3-203ENST00000534830 A0A0G2JMP0 313 aa8.47□□□□□ -1.05
CLSTN3-203ENST00000534830 A0A0X1KG70 313 aa8.47□□□□□ -1.05
CLSTN3-203ENST00000534830 F5H0A9 414 aaPredicted RBP8.47□□□□□ -1.05
CLSTN3-203ENST00000534830 GADD45GO95257 159 aa8.47□□□□□ -1.05
CLSTN3-203ENST00000534830 FSHBP01225 129 aa8.47□□□□□ -1.05
CLSTN3-203ENST00000534830 HIST1H1CP16403 213 aaKnown RBP8.47□□□□□ -1.05
CLSTN3-203ENST00000534830 GATA3P23771 443 aa8.47□□□□□ -1.05
CLSTN3-203ENST00000534830 FPR3P25089 353 aa8.47□□□□□ -1.05
CLSTN3-203ENST00000534830 CRABP1P29762 137 aa8.47□□□□□ -1.05
CLSTN3-203ENST00000534830 RGS6P49758 472 aa8.47□□□□□ -1.05
CLSTN3-203ENST00000534830 HMGA2P52926 109 aa8.47□□□□□ -1.05
CLSTN3-203ENST00000534830 SMIM11AP58511 58 aa8.47□□□□□ -1.05
CLSTN3-203ENST00000534830 COX10Q12887 443 aa8.47□□□□□ -1.05
CLSTN3-203ENST00000534830 KRT72Q14CN4 511 aa8.47□□□□□ -1.05
CLSTN3-203ENST00000534830 MEP1BQ16820 701 aa8.47□□□□□ -1.05
CLSTN3-203ENST00000534830 TMEM155Q4W5P6 130 aa8.47□□□□□ -1.05
CLSTN3-203ENST00000534830 C1orf94Q6P1W5 598 aa8.47□□□□□ -1.05
CLSTN3-203ENST00000534830 PGM2L1Q6PCE3 622 aa8.47□□□□□ -1.05
CLSTN3-203ENST00000534830 PIGWQ7Z7B1 504 aa8.47□□□□□ -1.05
CLSTN3-203ENST00000534830 LRRC28Q86X40 367 aaPredicted RBP8.47□□□□□ -1.05
CLSTN3-203ENST00000534830 GJC3Q8NFK1 279 aa8.47□□□□□ -1.05
CLSTN3-203ENST00000534830 OR4M2Q8NGB6 313 aa8.47□□□□□ -1.05
CLSTN3-203ENST00000534830 ITLN1Q8WWA0 313 aa8.47□□□□□ -1.05
CLSTN3-203ENST00000534830 ERMAPQ96PL5 475 aaPredicted RBP8.47□□□□□ -1.05
CLSTN3-203ENST00000534830 DDOQ99489 341 aa8.47□□□□□ -1.05
CLSTN3-203ENST00000534830 COQ7Q99807 217 aa8.47□□□□□ -1.05
CLSTN3-203ENST00000534830 ARPC2O15144 300 aa8.46□□□□□ -1.06
CLSTN3-203ENST00000534830 IDH3BO43837 385 aa8.46□□□□□ -1.06
CLSTN3-203ENST00000534830 GMNNO75496 209 aa8.46□□□□□ -1.06
CLSTN3-203ENST00000534830 PPP1R3DO95685 299 aa8.46□□□□□ -1.06
CLSTN3-203ENST00000534830 TNFRSF1AP19438 455 aa8.46□□□□□ -1.06
CLSTN3-203ENST00000534830 RRM2P31350 389 aa8.46□□□□□ -1.06
CLSTN3-203ENST00000534830 MSX2P35548 267 aaPredicted RBP8.46□□□□□ -1.06
CLSTN3-203ENST00000534830 SPIBQ01892 262 aa8.46□□□□□ -1.06
CLSTN3-203ENST00000534830 TSPAN31Q12999 210 aa8.46□□□□□ -1.06
CLSTN3-203ENST00000534830 HLXQ14774 488 aaPredicted RBP8.46□□□□□ -1.06
CLSTN3-203ENST00000534830 SPATS1Q496A3 300 aa8.46□□□□□ -1.06
CLSTN3-203ENST00000534830 SAMD4BQ5PRF9 694 aaKnown RBP8.46□□□□□ -1.06
CLSTN3-203ENST00000534830 ZNF362Q5T0B9 420 aaPredicted RBP8.46□□□□□ -1.06
CLSTN3-203ENST00000534830 DCAF12L2Q5VW00 463 aa8.46□□□□□ -1.06
CLSTN3-203ENST00000534830 SLC18B1Q6NT16 456 aa8.46□□□□□ -1.06
CLSTN3-203ENST00000534830 LEG1Q6P5S2 330 aa8.46□□□□□ -1.06
CLSTN3-203ENST00000534830 SLC26A10Q8NG04 563 aa8.46□□□□□ -1.06
CLSTN3-203ENST00000534830 OR8G5Q8NG78 346 aa8.46□□□□□ -1.06
CLSTN3-203ENST00000534830 OR2Z1Q8NG97 314 aa8.46□□□□□ -1.06
CLSTN3-203ENST00000534830 FANK1Q8TC84 345 aa8.46□□□□□ -1.06
CLSTN3-203ENST00000534830 CDRT15Q96T59 188 aa8.46□□□□□ -1.06
CLSTN3-203ENST00000534830 NMNAT3Q96T66 252 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms