RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 NPIPA1Q9UND3 350 aa4.2□□□□□ -1.74
CASP4-213ENST00000534356 CDH10Q9Y6N8 788 aa4.2□□□□□ -1.74
CASP4-213ENST00000534356 RTTNQ86VV8 2226 aa4.19□□□□□ -1.74
CASP4-213ENST00000534356 PSMB11A5LHX3 300 aa4.19□□□□□ -1.74
CASP4-213ENST00000534356 MED7O43513 233 aa4.19□□□□□ -1.74
CASP4-213ENST00000534356 PEX11AO75192 247 aa4.19□□□□□ -1.74
CASP4-213ENST00000534356 ALOX12BO75342 701 aa4.19□□□□□ -1.74
CASP4-213ENST00000534356 SPAG6O75602 509 aa4.19□□□□□ -1.74
CASP4-213ENST00000534356 LCA5LO95447 670 aa4.19□□□□□ -1.74
CASP4-213ENST00000534356 FOLR1P15328 257 aa4.19□□□□□ -1.74
CASP4-213ENST00000534356 ATP6V1C1P21283 382 aa4.19□□□□□ -1.74
CASP4-213ENST00000534356 MDKP21741 143 aaPredicted RBP4.19□□□□□ -1.74
CASP4-213ENST00000534356 KLK7P49862 253 aa4.19□□□□□ -1.74
CASP4-213ENST00000534356 MAXP61244 160 aa4.19□□□□□ -1.74
CASP4-213ENST00000534356 OGDHQ02218 1023 aa4.19□□□□□ -1.74
CASP4-213ENST00000534356 SNTB2Q13425 540 aaKnown RBP4.19□□□□□ -1.74
CASP4-213ENST00000534356 SLC36A3Q495N2 470 aa4.19□□□□□ -1.74
CASP4-213ENST00000534356 TP53I3Q53FA7 332 aa4.19□□□□□ -1.74
CASP4-213ENST00000534356 HSP90AA4PQ58FG1 418 aa4.19□□□□□ -1.74
CASP4-213ENST00000534356 FAM92BQ6ZTR7 304 aa4.19□□□□□ -1.74
CASP4-213ENST00000534356 ZDHHC21Q8IVQ6 265 aa4.19□□□□□ -1.74
CASP4-213ENST00000534356 SLC38A6Q8IZM9 456 aa4.19□□□□□ -1.74
CASP4-213ENST00000534356 RNF175Q8N4F7 328 aa4.19□□□□□ -1.74
CASP4-213ENST00000534356 DHRSXQ8N5I4 330 aa4.19□□□□□ -1.74
CASP4-213ENST00000534356 ARL6IP6Q8N6S5 226 aa4.19□□□□□ -1.74
CASP4-213ENST00000534356 NPWQ8N729 165 aa4.19□□□□□ -1.74
CASP4-213ENST00000534356 C20orf203Q8NBC4 194 aa4.19□□□□□ -1.74
CASP4-213ENST00000534356 NAT14Q8WUY8 206 aa4.19□□□□□ -1.74
CASP4-213ENST00000534356 SHC3Q92529 594 aa4.19□□□□□ -1.74
CASP4-213ENST00000534356 ECHDC3Q96DC8 303 aa4.19□□□□□ -1.74
CASP4-213ENST00000534356 AMDHD1Q96NU7 426 aa4.19□□□□□ -1.74
CASP4-213ENST00000534356 TSG101Q99816 390 aa4.19□□□□□ -1.74
CASP4-213ENST00000534356 SLC35A5Q9BS91 424 aa4.19□□□□□ -1.74
CASP4-213ENST00000534356 ING2Q9H160 280 aa4.19□□□□□ -1.74
CASP4-213ENST00000534356 SLC17A5Q9NRA2 495 aa4.19□□□□□ -1.74
CASP4-213ENST00000534356 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.19□□□□□ -1.74
CASP4-213ENST00000534356 SLC23A2Q9UGH3 650 aa4.19□□□□□ -1.74
CASP4-213ENST00000534356 BTNL2Q9UIR0 455 aa4.19□□□□□ -1.74
CASP4-213ENST00000534356 SLC17A4Q9Y2C5 497 aa4.19□□□□□ -1.74
CASP4-213ENST00000534356 CACNA1CQ13936 2221 aa4.18□□□□□ -1.74
CASP4-213ENST00000534356 SNRNP200O75643 2136 aaKnown RBP4.18□□□□□ -1.74
CASP4-213ENST00000534356 IGHV5-51A0A0C4DH38 117 aa4.18□□□□□ -1.74
CASP4-213ENST00000534356 C19orf84I3L1E1 186 aa4.18□□□□□ -1.74
CASP4-213ENST00000534356 LRATO95237 230 aa4.18□□□□□ -1.74
CASP4-213ENST00000534356 SNAPINO95295 136 aa4.18□□□□□ -1.74
CASP4-213ENST00000534356 KRT8P05787 483 aa4.18□□□□□ -1.74
CASP4-213ENST00000534356 HOXC4P09017 264 aaPredicted RBP4.18□□□□□ -1.74
CASP4-213ENST00000534356 ZNF17P17021 662 aa4.18□□□□□ -1.74
CASP4-213ENST00000534356 FGF9P31371 208 aaPredicted RBP4.18□□□□□ -1.74
CASP4-213ENST00000534356 NUP107P57740 925 aa4.18□□□□□ -1.74
CASP4-213ENST00000534356 ELP6Q0PNE2 266 aa4.18□□□□□ -1.74
CASP4-213ENST00000534356 TRIM16LQ309B1 348 aa4.18□□□□□ -1.74
CASP4-213ENST00000534356 FAM71AQ8IYT1 594 aa4.18□□□□□ -1.74
CASP4-213ENST00000534356 OR10G6Q8NH81 332 aa4.18□□□□□ -1.74
CASP4-213ENST00000534356 FBXO30Q8TB52 745 aa4.18□□□□□ -1.74
CASP4-213ENST00000534356 FAM172AQ8WUF8 416 aa4.18□□□□□ -1.74
CASP4-213ENST00000534356 DNAJA4Q8WW22 397 aaPredicted RBP4.18□□□□□ -1.74
CASP4-213ENST00000534356 CHCHD10Q8WYQ3 142 aaPredicted RBP4.18□□□□□ -1.74
CASP4-213ENST00000534356 RAPGEF5Q92565 580 aa4.18□□□□□ -1.74
CASP4-213ENST00000534356 SLC35E1Q96K37 410 aa4.18□□□□□ -1.74
CASP4-213ENST00000534356 C9orf72Q96LT7 481 aa4.18□□□□□ -1.74
CASP4-213ENST00000534356 ZNF285Q96NJ3 590 aa4.18□□□□□ -1.74
CASP4-213ENST00000534356 OR2M4Q96R27 311 aa4.18□□□□□ -1.74
CASP4-213ENST00000534356 PEBP4Q96S96 227 aa4.18□□□□□ -1.74
CASP4-213ENST00000534356 TBX15Q96SF7 602 aa4.18□□□□□ -1.74
CASP4-213ENST00000534356 C11orf70Q9BRQ4 267 aa4.18□□□□□ -1.74
CASP4-213ENST00000534356 ZNF670Q9BS34 389 aa4.18□□□□□ -1.74
CASP4-213ENST00000534356 TRIM62Q9BVG3 475 aa4.18□□□□□ -1.74
CASP4-213ENST00000534356 RIOK2Q9BVS4 552 aaKnown RBP4.18□□□□□ -1.74
CASP4-213ENST00000534356 LRRC19Q9H756 370 aa4.18□□□□□ -1.74
CASP4-213ENST00000534356 LHX9Q9NQ69 397 aa4.18□□□□□ -1.74
CASP4-213ENST00000534356 TBK1Q9UHD2 729 aa4.18□□□□□ -1.74
CASP4-213ENST00000534356 CFAP45Q9UL16 551 aa4.18□□□□□ -1.74
CASP4-213ENST00000534356 HPCAL4Q9UM19 191 aa4.18□□□□□ -1.74
CASP4-213ENST00000534356 RASD1Q9Y272 281 aa4.18□□□□□ -1.74
CASP4-213ENST00000534356 AK6Q9Y3D8 172 aaKnown RBP4.18□□□□□ -1.74
CASP4-213ENST00000534356 OR52A4PA6NMU1 304 aa4.17□□□□□ -1.74
CASP4-213ENST00000534356 TRIM49D1C9J1S8 452 aa4.17□□□□□ -1.74
CASP4-213ENST00000534356 BTN3A3O00478 584 aa4.17□□□□□ -1.74
CASP4-213ENST00000534356 ZNF780AO75290 641 aaPredicted RBP4.17□□□□□ -1.74
CASP4-213ENST00000534356 MTX2O75431 263 aa4.17□□□□□ -1.74
CASP4-213ENST00000534356 PALMO75781 387 aa4.17□□□□□ -1.74
CASP4-213ENST00000534356 CAPN1P07384 714 aa4.17□□□□□ -1.74
CASP4-213ENST00000534356 IVLP07476 585 aa4.17□□□□□ -1.74
CASP4-213ENST00000534356 ALOX5P09917 674 aa4.17□□□□□ -1.74
CASP4-213ENST00000534356 RBMY1CP0DJD4 496 aa4.17□□□□□ -1.74
CASP4-213ENST00000534356 HTR1EP28566 365 aa4.17□□□□□ -1.74
CASP4-213ENST00000534356 CASP14P31944 242 aa4.17□□□□□ -1.74
CASP4-213ENST00000534356 CTRLP40313 264 aa4.17□□□□□ -1.74
CASP4-213ENST00000534356 GPR1P46091 355 aa4.17□□□□□ -1.74
CASP4-213ENST00000534356 RGS4P49798 205 aa4.17□□□□□ -1.74
CASP4-213ENST00000534356 HNRNPA3P51991 378 aaKnown RBP4.17□□□□□ -1.74
CASP4-213ENST00000534356 LRRC63Q05C16 580 aa4.17□□□□□ -1.74
CASP4-213ENST00000534356 RAD51Q06609 339 aa4.17□□□□□ -1.74
CASP4-213ENST00000534356 GTF3C1Q12789 2109 aa4.17□□□□□ -1.74
CASP4-213ENST00000534356 ARMC12Q5T9G4 340 aa4.17□□□□□ -1.74
CASP4-213ENST00000534356 WDR59Q6PJI9 974 aa4.17□□□□□ -1.74
CASP4-213ENST00000534356 SYT10Q6XYQ8 523 aa4.17□□□□□ -1.74
CASP4-213ENST00000534356 MOB3BQ86TA1 216 aa4.17□□□□□ -1.74
CASP4-213ENST00000534356 MKXQ8IYA7 352 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms