RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 BHLHE23Q8NDY6 225 aa8.43□□□□□ -1.06
CSDE1-215ENST00000533818 OR52H1Q8NGJ2 320 aa8.43□□□□□ -1.06
CSDE1-215ENST00000533818 OR5J2Q8NH18 312 aa8.43□□□□□ -1.06
CSDE1-215ENST00000533818 NABP1Q96AH0 204 aa8.43□□□□□ -1.06
CSDE1-215ENST00000533818 COG8Q96MW5 612 aa8.43□□□□□ -1.06
CSDE1-215ENST00000533818 ARMC7Q9H6L4 198 aa8.43□□□□□ -1.06
CSDE1-215ENST00000533818 TMEM100Q9NV29 134 aa8.43□□□□□ -1.06
CSDE1-215ENST00000533818 KAAG1Q9UBP8 84 aa8.43□□□□□ -1.06
CSDE1-215ENST00000533818 GIMAP2Q9UG22 337 aa8.43□□□□□ -1.06
CSDE1-215ENST00000533818 SCOCQ9UIL1 159 aa8.43□□□□□ -1.06
CSDE1-215ENST00000533818 KCNG2Q9UJ96 466 aa8.43□□□□□ -1.06
CSDE1-215ENST00000533818 PITPNC1Q9UKF7 332 aa8.43□□□□□ -1.06
CSDE1-215ENST00000533818 ZNF232Q9UNY5 417 aa8.43□□□□□ -1.06
CSDE1-215ENST00000533818 A0A1B0GWA3 101 aa8.42□□□□□ -1.06
CSDE1-215ENST00000533818 VGLL3A8MV65 326 aa8.42□□□□□ -1.06
CSDE1-215ENST00000533818 RNASET2O00584 256 aaKnown RBP8.42□□□□□ -1.06
CSDE1-215ENST00000533818 LDLRAD4O15165 306 aa8.42□□□□□ -1.06
CSDE1-215ENST00000533818 RNF13O43567 381 aa8.42□□□□□ -1.06
CSDE1-215ENST00000533818 CPSF4O95639 269 aaKnown RBP8.42□□□□□ -1.06
CSDE1-215ENST00000533818 C1QCP02747 245 aa8.42□□□□□ -1.06
CSDE1-215ENST00000533818 ECHS1P30084 290 aa8.42□□□□□ -1.06
CSDE1-215ENST00000533818 SERPINB9P50453 376 aa8.42□□□□□ -1.06
CSDE1-215ENST00000533818 ALG10BQ5I7T1 473 aa8.42□□□□□ -1.06
CSDE1-215ENST00000533818 CFAP157Q5JU67 520 aa8.42□□□□□ -1.06
CSDE1-215ENST00000533818 FAM27BQ5VT28 67 aa8.42□□□□□ -1.06
CSDE1-215ENST00000533818 HCP5Q6MZN7 132 aa8.42□□□□□ -1.06
CSDE1-215ENST00000533818 C1orf94Q6P1W5 598 aa8.42□□□□□ -1.06
CSDE1-215ENST00000533818 C8orf86Q6ZUL3 223 aa8.42□□□□□ -1.06
CSDE1-215ENST00000533818 ANKRD46Q86W74 232 aa8.42□□□□□ -1.06
CSDE1-215ENST00000533818 RPP25LQ8N5L8 163 aaKnown RBP8.42□□□□□ -1.06
CSDE1-215ENST00000533818 RPS4Y2Q8TD47 263 aa8.42□□□□□ -1.06
CSDE1-215ENST00000533818 AENQ8WTP8 325 aaKnown RBP8.42□□□□□ -1.06
CSDE1-215ENST00000533818 SLC35A5Q9BS91 424 aa8.42□□□□□ -1.06
CSDE1-215ENST00000533818 C1orf50Q9BV19 199 aa8.42□□□□□ -1.06
CSDE1-215ENST00000533818 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.42□□□□□ -1.06
CSDE1-215ENST00000533818 UGT2A1Q9Y4X1 527 aa8.42□□□□□ -1.06
CSDE1-215ENST00000533818 MUC4Q99102 2169 aa8.42□□□□□ -1.06
CSDE1-215ENST00000533818 NUDT19A8MXV4 375 aa8.41□□□□□ -1.06
CSDE1-215ENST00000533818 PRR23D1E9PI22 279 aaPredicted RBP8.41□□□□□ -1.06
CSDE1-215ENST00000533818 M0R1W7 72 aa8.41□□□□□ -1.06
CSDE1-215ENST00000533818 AZIN1O14977 448 aa8.41□□□□□ -1.06
CSDE1-215ENST00000533818 PEX11AO75192 247 aa8.41□□□□□ -1.06
CSDE1-215ENST00000533818 SLC2A10O95528 541 aa8.41□□□□□ -1.06
CSDE1-215ENST00000533818 CHEK2O96017 543 aa8.41□□□□□ -1.06
CSDE1-215ENST00000533818 DUX4L4P0CJ87 422 aa8.41□□□□□ -1.06
CSDE1-215ENST00000533818 PRR23D2P0DMB1 279 aaPredicted RBP8.41□□□□□ -1.06
CSDE1-215ENST00000533818 LAP3P28838 519 aa8.41□□□□□ -1.06
CSDE1-215ENST00000533818 GSK3BP49841 420 aa8.41□□□□□ -1.06
CSDE1-215ENST00000533818 RAD23AP54725 363 aa8.41□□□□□ -1.06
CSDE1-215ENST00000533818 PLTPP55058 493 aa8.41□□□□□ -1.06
CSDE1-215ENST00000533818 PCBD1P61457 104 aa8.41□□□□□ -1.06
CSDE1-215ENST00000533818 NAA20P61599 178 aa8.41□□□□□ -1.06
CSDE1-215ENST00000533818 BLMHQ13867 455 aa8.41□□□□□ -1.06
CSDE1-215ENST00000533818 C10orf128Q5T292 105 aa8.41□□□□□ -1.06
CSDE1-215ENST00000533818 FBXW12Q6X9E4 464 aa8.41□□□□□ -1.06
CSDE1-215ENST00000533818 RNF165Q6ZSG1 346 aa8.41□□□□□ -1.06
CSDE1-215ENST00000533818 DNAJA4Q8WW22 397 aaPredicted RBP8.41□□□□□ -1.06
CSDE1-215ENST00000533818 H1FXQ92522 213 aaKnown RBP8.41□□□□□ -1.06
CSDE1-215ENST00000533818 LYZL4Q96KX0 146 aa8.41□□□□□ -1.06
CSDE1-215ENST00000533818 PPP3R2Q96LZ3 170 aa8.41□□□□□ -1.06
CSDE1-215ENST00000533818 CCL13Q99616 98 aa8.41□□□□□ -1.06
CSDE1-215ENST00000533818 CPPED1Q9BRF8 314 aaPredicted RBP8.41□□□□□ -1.06
CSDE1-215ENST00000533818 MRPL13Q9BYD1 178 aaKnown RBP8.41□□□□□ -1.06
CSDE1-215ENST00000533818 ABCB10Q9NRK6 738 aa8.41□□□□□ -1.06
CSDE1-215ENST00000533818 TAS2R5Q9NYW4 299 aa8.41□□□□□ -1.06
CSDE1-215ENST00000533818 PTTG3PQ9NZH4 202 aa8.41□□□□□ -1.06
CSDE1-215ENST00000533818 SNX12Q9UMY4 172 aa8.41□□□□□ -1.06
CSDE1-215ENST00000533818 IGHV3OR15-7A0A075B7D8 119 aa8.4□□□□□ -1.06
CSDE1-215ENST00000533818 A0A1B0GWJ7 208 aa8.4□□□□□ -1.06
CSDE1-215ENST00000533818 SEC14L6B5MCN3 397 aa8.4□□□□□ -1.06
CSDE1-215ENST00000533818 CST2P09228 141 aa8.4□□□□□ -1.06
CSDE1-215ENST00000533818 CD200P41217 278 aa8.4□□□□□ -1.06
CSDE1-215ENST00000533818 LGALS4P56470 323 aa8.4□□□□□ -1.06
CSDE1-215ENST00000533818 RPL23AP62750 156 aaKnown RBP8.4□□□□□ -1.06
CSDE1-215ENST00000533818 ECH1Q13011 328 aa8.4□□□□□ -1.06
CSDE1-215ENST00000533818 HHATQ5VTY9 493 aa8.4□□□□□ -1.06
CSDE1-215ENST00000533818 ULK3Q6PHR2 472 aa8.4□□□□□ -1.06
CSDE1-215ENST00000533818 C18orf65Q6ZTR6 163 aa8.4□□□□□ -1.06
CSDE1-215ENST00000533818 OR2W3Q7Z3T1 314 aa8.4□□□□□ -1.06
CSDE1-215ENST00000533818 RANBP3LQ86VV4 465 aaPredicted RBP8.4□□□□□ -1.06
CSDE1-215ENST00000533818 C11orf42Q8N5U0 333 aa8.4□□□□□ -1.06
CSDE1-215ENST00000533818 LSMEM1Q8N8F7 131 aa8.4□□□□□ -1.06
CSDE1-215ENST00000533818 NOXO1Q8NFA2 376 aa8.4□□□□□ -1.06
CSDE1-215ENST00000533818 OR5D13Q8NGL4 314 aa8.4□□□□□ -1.06
CSDE1-215ENST00000533818 DUX3Q96PT4 197 aa8.4□□□□□ -1.06
CSDE1-215ENST00000533818 ERP44Q9BS26 406 aa8.4□□□□□ -1.06
CSDE1-215ENST00000533818 CACYBPQ9HB71 228 aaKnown RBP8.4□□□□□ -1.06
CSDE1-215ENST00000533818 PLA2G2EQ9NZK7 142 aa8.4□□□□□ -1.06
CSDE1-215ENST00000533818 PRPF19Q9UMS4 504 aaKnown RBP8.4□□□□□ -1.06
CSDE1-215ENST00000533818 DNAJC15Q9Y5T4 150 aa8.4□□□□□ -1.06
CSDE1-215ENST00000533818 DNAH10Q8IVF4 4471 aa8.4□□□□□ -1.06
CSDE1-215ENST00000533818 PRSS51A0A1B0GVH4 220 aa8.39□□□□□ -1.07
CSDE1-215ENST00000533818 IQCF6A8MYZ5 107 aa8.39□□□□□ -1.07
CSDE1-215ENST00000533818 H0YAE9 185 aa8.39□□□□□ -1.07
CSDE1-215ENST00000533818 NDUFB3O43676 98 aa8.39□□□□□ -1.07
CSDE1-215ENST00000533818 GLCEO94923 617 aa8.39□□□□□ -1.07
CSDE1-215ENST00000533818 MT-ATP6P00846 226 aa8.39□□□□□ -1.07
CSDE1-215ENST00000533818 SNRNP70P08621 437 aaKnown RBP8.39□□□□□ -1.07
CSDE1-215ENST00000533818 HCKP08631 526 aa8.39□□□□□ -1.07
CSDE1-215ENST00000533818 COX5BP10606 129 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms