RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 TMIGD3P0DMS9 266 aaPredicted RBP10.2□□□□□ -0.78
AMBRA1-211ENST00000533727 RFC3P40938 356 aa10.2□□□□□ -0.78
AMBRA1-211ENST00000533727 MRPL19P49406 292 aaKnown RBP10.2□□□□□ -0.78
AMBRA1-211ENST00000533727 CAV3P56539 151 aa10.2□□□□□ -0.78
AMBRA1-211ENST00000533727 RPL18Q07020 188 aaKnown RBP10.2□□□□□ -0.78
AMBRA1-211ENST00000533727 LTBP1Q14766 1721 aa10.2□□□□□ -0.78
AMBRA1-211ENST00000533727 BAK1Q16611 211 aa10.2□□□□□ -0.78
AMBRA1-211ENST00000533727 ZNF620Q6ZNG0 422 aa10.2□□□□□ -0.78
AMBRA1-211ENST00000533727 KNL1Q8NG31 2342 aa10.2□□□□□ -0.78
AMBRA1-211ENST00000533727 RASD2Q96D21 266 aa10.2□□□□□ -0.78
AMBRA1-211ENST00000533727 OR11A1Q9GZK7 315 aa10.2□□□□□ -0.78
AMBRA1-211ENST00000533727 SLC25A18Q9H1K4 315 aa10.2□□□□□ -0.78
AMBRA1-211ENST00000533727 PLXNA1Q9UIW2 1896 aa10.2□□□□□ -0.78
AMBRA1-211ENST00000533727 TP53TG5Q9Y2B4 290 aa10.2□□□□□ -0.78
AMBRA1-211ENST00000533727 MRPS28Q9Y2Q9 187 aaKnown RBP10.2□□□□□ -0.78
AMBRA1-211ENST00000533727 TUBGCP6Q96RT7 1819 aa10.2□□□□□ -0.78
AMBRA1-211ENST00000533727 ABCD4O14678 606 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 MT-CO2P00403 227 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 IGHV3-9P01782 118 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 SHBQ15464 509 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 DUSP7Q16829 419 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 PRICKLE4Q2TBC4 344 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 EXOSC6Q5RKV6 272 aaKnown RBP10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 CD276Q5ZPR3 534 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 TMEM108Q6UXF1 575 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 ZNF573Q86YE8 665 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 NKAIN4Q8IVV8 208 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 OR10G3Q8NGC4 313 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 RNF141Q8WVD5 230 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 RNF170Q96K19 258 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 FAM60AQ9NP50 221 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 KIF25Q9UIL4 384 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 NEU3Q9UQ49 428 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 MN1Q10571 1320 aaPredicted RBP10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 FOCADQ5VW36 1801 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 A0A1W2PQD3 144 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 SMLR1H3BR10 107 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 M0R135 149 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 AIPO00170 330 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 SLC16A6O15403 523 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 GREM1O60565 184 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 SCG5P05408 212 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 ZNF793Q6ZN11 406 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 HAS2Q92819 552 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 TRMT61AQ96FX7 289 aaKnown RBP10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 ZNF799Q96GE5 643 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 PUS1Q9Y606 427 aaKnown RBP eCLIP10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 PRSS37A4D1T9 235 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 A8MXE2 369 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 K7EPK0 472 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 LILRB5O75023 590 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 MAKP20794 623 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 BTG1P62324 171 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 TOMM34Q15785 309 aaPredicted RBP10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 KRTCAP3Q53RY4 240 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 LSRQ86X29 649 aaPredicted RBP10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 PRR18Q8N4B5 295 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 FAM71E2Q8N5Q1 922 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 OR5M9Q8NGP3 310 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 PFN4Q8NHR9 129 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 TOMM40LQ969M1 308 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 MARC2Q969Z3 335 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 SLAMF9Q96A28 289 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 TEX37Q96LM6 180 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 NKX3-1Q99801 234 aaPredicted RBP10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 CBY1Q9Y3M2 126 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 TRIOBPQ9H2D6 2365 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 CSRP1P21291 193 aaKnown RBP10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 GDNFP39905 211 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 DAPP51397 102 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 OR2G6Q5TZ20 316 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 OR6M1Q8NGM8 313 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 UPRTQ96BW1 309 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 MSI2Q96DH6 328 aaKnown RBP10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 EMC6Q9BV81 110 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 SMIM3Q9BZL3 60 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 NRIP3Q9NQ35 241 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 AMDHD2Q9Y303 409 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 PRELID3BQ9Y3B1 194 aa10.19□□□□□ -0.78
AMBRA1-211ENST00000533727 TDRD15B5MCY1 1934 aaKnown RBP10.18□□□□□ -0.78
AMBRA1-211ENST00000533727 MEIS3P1A6NDR6 274 aa10.18□□□□□ -0.78
AMBRA1-211ENST00000533727 HTR2CP28335 458 aa10.18□□□□□ -0.78
AMBRA1-211ENST00000533727 RPS18P62269 152 aaKnown RBP10.18□□□□□ -0.78
AMBRA1-211ENST00000533727 SQSTM1Q13501 440 aa10.18□□□□□ -0.78
AMBRA1-211ENST00000533727 EBPQ15125 230 aaKnown RBP10.18□□□□□ -0.78
AMBRA1-211ENST00000533727 OR6F1Q8NGZ6 308 aa10.18□□□□□ -0.78
AMBRA1-211ENST00000533727 SLAMF6Q96DU3 332 aa10.18□□□□□ -0.78
AMBRA1-211ENST00000533727 ATF6BQ99941 703 aa10.18□□□□□ -0.78
AMBRA1-211ENST00000533727 FAM212BQ9NTI7 297 aaPredicted RBP10.18□□□□□ -0.78
AMBRA1-211ENST00000533727 ZNF391Q9UJN7 358 aa10.18□□□□□ -0.78
AMBRA1-211ENST00000533727 ZNF732B4DXR9 585 aa10.18□□□□□ -0.78
AMBRA1-211ENST00000533727 HLA-DMAP28067 261 aa10.18□□□□□ -0.78
AMBRA1-211ENST00000533727 F2RL1P55085 397 aa10.18□□□□□ -0.78
AMBRA1-211ENST00000533727 PAQR6Q6TCH4 344 aa10.18□□□□□ -0.78
AMBRA1-211ENST00000533727 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.18□□□□□ -0.78
AMBRA1-211ENST00000533727 CMTM4Q8IZR5 234 aa10.18□□□□□ -0.78
AMBRA1-211ENST00000533727 NOXO1Q8NFA2 376 aa10.18□□□□□ -0.78
AMBRA1-211ENST00000533727 APOBEC3DQ96AK3 386 aaPredicted RBP10.18□□□□□ -0.78
AMBRA1-211ENST00000533727 UBL7Q96S82 380 aaPredicted RBP10.18□□□□□ -0.78
AMBRA1-211ENST00000533727 PIGLQ9Y2B2 252 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms