RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 FAHD2AQ96GK7 314 aa8.86□□□□□ -0.99
CAPN1-225ENST00000533704 C1orf159Q96HA4 380 aa8.86□□□□□ -0.99
CAPN1-225ENST00000533704 GAL3ST1Q99999 423 aa8.86□□□□□ -0.99
CAPN1-225ENST00000533704 CDADC1Q9BWV3 514 aa8.86□□□□□ -0.99
CAPN1-225ENST00000533704 EGLN3Q9H6Z9 239 aa8.86□□□□□ -0.99
CAPN1-225ENST00000533704 ACTR3BQ9P1U1 418 aa8.86□□□□□ -0.99
CAPN1-225ENST00000533704 CGGBP1Q9UFW8 167 aaPredicted RBP8.86□□□□□ -0.99
CAPN1-225ENST00000533704 ZDHHC8Q9ULC8 765 aa8.86□□□□□ -0.99
CAPN1-225ENST00000533704 LYVE1Q9Y5Y7 322 aa8.86□□□□□ -0.99
CAPN1-225ENST00000533704 LHFPL6Q9Y693 200 aa8.86□□□□□ -0.99
CAPN1-225ENST00000533704 OR6C68A6NDL8 312 aa8.85□□□□□ -0.99
CAPN1-225ENST00000533704 ARPC3O15145 178 aa8.85□□□□□ -0.99
CAPN1-225ENST00000533704 ICMTO60725 284 aa8.85□□□□□ -0.99
CAPN1-225ENST00000533704 KRT36O76013 467 aa8.85□□□□□ -0.99
CAPN1-225ENST00000533704 CCNB2O95067 398 aa8.85□□□□□ -0.99
CAPN1-225ENST00000533704 PYCR1P32322 319 aa8.85□□□□□ -0.99
CAPN1-225ENST00000533704 RBMXP38159 391 aaKnown RBP8.85□□□□□ -0.99
CAPN1-225ENST00000533704 SLC3A1Q07837 685 aa8.85□□□□□ -0.99
CAPN1-225ENST00000533704 KCNMB1Q16558 191 aa8.85□□□□□ -0.99
CAPN1-225ENST00000533704 KRTAP24-1Q3LI83 254 aa8.85□□□□□ -0.99
CAPN1-225ENST00000533704 SLC36A3Q495N2 470 aa8.85□□□□□ -0.99
CAPN1-225ENST00000533704 OR2T2Q6IF00 324 aa8.85□□□□□ -0.99
CAPN1-225ENST00000533704 ACSM5Q6NUN0 579 aa8.85□□□□□ -0.99
CAPN1-225ENST00000533704 PEG10Q86TG7 708 aaKnown RBP8.85□□□□□ -0.99
CAPN1-225ENST00000533704 ATG16L2Q8NAA4 619 aa8.85□□□□□ -0.99
CAPN1-225ENST00000533704 CYB561A3Q8NBI2 242 aa8.85□□□□□ -0.99
CAPN1-225ENST00000533704 SLC26A10Q8NG04 563 aa8.85□□□□□ -0.99
CAPN1-225ENST00000533704 OR5L1Q8NGL2 311 aa8.85□□□□□ -0.99
CAPN1-225ENST00000533704 ITLN1Q8WWA0 313 aa8.85□□□□□ -0.99
CAPN1-225ENST00000533704 CCDC124Q96CT7 223 aaKnown RBP8.85□□□□□ -0.99
CAPN1-225ENST00000533704 COG8Q96MW5 612 aa8.85□□□□□ -0.99
CAPN1-225ENST00000533704 DIRC2Q96SL1 478 aa8.85□□□□□ -0.99
CAPN1-225ENST00000533704 PITX2Q99697 317 aa8.85□□□□□ -0.99
CAPN1-225ENST00000533704 HDHD2Q9H0R4 259 aa8.85□□□□□ -0.99
CAPN1-225ENST00000533704 OCEL1Q9H607 264 aa8.85□□□□□ -0.99
CAPN1-225ENST00000533704 METTL17Q9H7H0 456 aaPredicted RBP8.85□□□□□ -0.99
CAPN1-225ENST00000533704 TBC1D23Q9NUY8 699 aa8.85□□□□□ -0.99
CAPN1-225ENST00000533704 DCAF16Q9NXF7 216 aa8.85□□□□□ -0.99
CAPN1-225ENST00000533704 KLHL21Q9UJP4 597 aa8.85□□□□□ -0.99
CAPN1-225ENST00000533704 CDH10Q9Y6N8 788 aa8.85□□□□□ -0.99
CAPN1-225ENST00000533704 U3KQV3 271 aa8.85□□□□□ -0.99
CAPN1-225ENST00000533704 TRAV20A0A0B4J274 112 aa8.84□□□□□ -0.99
CAPN1-225ENST00000533704 F5H5K5 113 aa8.84□□□□□ -0.99
CAPN1-225ENST00000533704 IDH3BO43837 385 aa8.84□□□□□ -0.99
CAPN1-225ENST00000533704 RGS9O75916 674 aaPredicted RBP8.84□□□□□ -0.99
CAPN1-225ENST00000533704 UBOX5O94941 541 aa8.84□□□□□ -0.99
CAPN1-225ENST00000533704 FAM107AO95990 144 aa8.84□□□□□ -0.99
CAPN1-225ENST00000533704 CD55P08174 381 aa8.84□□□□□ -0.99
CAPN1-225ENST00000533704 SBK2P0C263 348 aa8.84□□□□□ -0.99
CAPN1-225ENST00000533704 ANPEPP15144 967 aa8.84□□□□□ -0.99
CAPN1-225ENST00000533704 ZNF823P16415 610 aa8.84□□□□□ -0.99
CAPN1-225ENST00000533704 KITLGP21583 273 aa8.84□□□□□ -0.99
CAPN1-225ENST00000533704 TUBG1P23258 451 aa8.84□□□□□ -0.99
CAPN1-225ENST00000533704 RGS6P49758 472 aa8.84□□□□□ -0.99
CAPN1-225ENST00000533704 PRSS12P56730 875 aa8.84□□□□□ -0.99
CAPN1-225ENST00000533704 CDK5R2Q13319 367 aa8.84□□□□□ -0.99
CAPN1-225ENST00000533704 FAM98BQ52LJ0 330 aaKnown RBP8.84□□□□□ -0.99
CAPN1-225ENST00000533704 LIPNQ5VXI9 398 aa8.84□□□□□ -0.99
CAPN1-225ENST00000533704 CFAP77Q6ZQR2 320 aa8.84□□□□□ -0.99
CAPN1-225ENST00000533704 Q6ZR03 302 aa8.84□□□□□ -0.99
CAPN1-225ENST00000533704 AQP11Q8NBQ7 271 aa8.84□□□□□ -0.99
CAPN1-225ENST00000533704 BHLHE23Q8NDY6 225 aa8.84□□□□□ -0.99
CAPN1-225ENST00000533704 PROKR2Q8NFJ6 384 aa8.84□□□□□ -0.99
CAPN1-225ENST00000533704 OR51L1Q8NGJ5 315 aa8.84□□□□□ -0.99
CAPN1-225ENST00000533704 PTP4A1Q93096 173 aa8.84□□□□□ -0.99
CAPN1-225ENST00000533704 APOBEC3DQ96AK3 386 aaPredicted RBP8.84□□□□□ -0.99
CAPN1-225ENST00000533704 HAVCR1Q96D42 359 aa8.84□□□□□ -0.99
CAPN1-225ENST00000533704 LRGUKQ96M69 825 aa8.84□□□□□ -0.99
CAPN1-225ENST00000533704 COQ7Q99807 217 aa8.84□□□□□ -0.99
CAPN1-225ENST00000533704 BTBD10Q9BSF8 475 aa8.84□□□□□ -0.99
CAPN1-225ENST00000533704 PLA2G12AQ9BZM1 189 aa8.84□□□□□ -0.99
CAPN1-225ENST00000533704 REEP1Q9H902 201 aa8.84□□□□□ -0.99
CAPN1-225ENST00000533704 WDR76Q9H967 626 aa8.84□□□□□ -0.99
CAPN1-225ENST00000533704 TUBG2Q9NRH3 451 aa8.84□□□□□ -0.99
CAPN1-225ENST00000533704 VNN3Q9NY84 501 aa8.84□□□□□ -0.99
CAPN1-225ENST00000533704 METRNQ9UJH8 293 aa8.84□□□□□ -0.99
CAPN1-225ENST00000533704 PCDHB10Q9UN67 800 aa8.84□□□□□ -0.99
CAPN1-225ENST00000533704 SAMHD1Q9Y3Z3 626 aaKnown RBP8.84□□□□□ -0.99
CAPN1-225ENST00000533704 CUBNO60494 3623 aa8.84□□□□□ -0.99
CAPN1-225ENST00000533704 IGHV3-64DA0A0J9YX35 117 aa8.83□□□□□ -1
CAPN1-225ENST00000533704 TCRBV5S2A0A599 114 aa8.83□□□□□ -1
CAPN1-225ENST00000533704 TVP23AA6NH52 213 aa8.83□□□□□ -1
CAPN1-225ENST00000533704 SURF4O15260 269 aa8.83□□□□□ -1
CAPN1-225ENST00000533704 PLPP2O43688 288 aa8.83□□□□□ -1
CAPN1-225ENST00000533704 SOX14O95416 240 aa8.83□□□□□ -1
CAPN1-225ENST00000533704 PNPP00491 289 aa8.83□□□□□ -1
CAPN1-225ENST00000533704 GASTP01350 101 aa8.83□□□□□ -1
CAPN1-225ENST00000533704 IGHV2-5P01817 119 aa8.83□□□□□ -1
CAPN1-225ENST00000533704 LCATP04180 440 aa8.83□□□□□ -1
CAPN1-225ENST00000533704 ADH4P08319 380 aa8.83□□□□□ -1
CAPN1-225ENST00000533704 RAC2P15153 192 aa8.83□□□□□ -1
CAPN1-225ENST00000533704 TNFRSF1AP19438 455 aa8.83□□□□□ -1
CAPN1-225ENST00000533704 CALB2P22676 271 aa8.83□□□□□ -1
CAPN1-225ENST00000533704 RPS27P42677 84 aaKnown RBP8.83□□□□□ -1
CAPN1-225ENST00000533704 HIST1H3AP68431 136 aa8.83□□□□□ -1
CAPN1-225ENST00000533704 LCN2P80188 198 aa8.83□□□□□ -1
CAPN1-225ENST00000533704 MS4A2Q01362 244 aa8.83□□□□□ -1
CAPN1-225ENST00000533704 COX10Q12887 443 aa8.83□□□□□ -1
CAPN1-225ENST00000533704 TRIM25Q14258 630 aaKnown RBP8.83□□□□□ -1
CAPN1-225ENST00000533704 HIST2H3PS2Q5TEC6 136 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms