RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 FCRL6Q6DN72 434 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 SMARCD3Q6STE5 483 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 KIRREL2Q6UWL6 708 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 ENPP6Q6UWR7 440 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 PTAR1Q7Z6K3 402 aaPredicted RBP4.92□□□□□ -1.62
CD44-236ENST00000533222 SLC47A2Q86VL8 602 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 GABRG1Q8N1C3 465 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 GTPBP8Q8N3Z3 284 aaPredicted RBP4.92□□□□□ -1.62
CD44-236ENST00000533222 C11orf42Q8N5U0 333 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 FAM86B1Q8N7N1 296 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 ARL14EPQ8N8R7 260 aaPredicted RBP4.92□□□□□ -1.62
CD44-236ENST00000533222 COLGALT1Q8NBJ5 622 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 SLC16A11Q8NCK7 471 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 SLC30A7Q8NEW0 376 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 OR4D9Q8NGE8 314 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 OR5A2Q8NGI9 324 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 OR4P4Q8NGL7 312 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 GNPDA2Q8TDQ7 276 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 CNOT9Q92600 299 aaKnown RBP4.92□□□□□ -1.62
CD44-236ENST00000533222 PNPLA2Q96AD5 504 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 MIB2Q96AX9 1013 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 ELMOD3Q96FG2 381 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 DTD2Q96FN9 168 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 ITCHQ96J02 903 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 TEX37Q96LM6 180 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 HARBI1Q96MB7 349 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 CCDC115Q96NT0 180 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 NECTIN4Q96NY8 510 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 ZNF607Q96SK3 696 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 MBOAT4Q96T53 435 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 SUCNR1Q9BXA5 334 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 TLNRD1Q9H1K6 362 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 CPVLQ9H3G5 476 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 TXNIPQ9H3M7 391 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 PLK3Q9H4B4 646 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 RBM22Q9NW64 420 aaKnown RBP eCLIP4.92□□□□□ -1.62
CD44-236ENST00000533222 GPATCH2LQ9NWQ4 482 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 ZNF346Q9UL40 294 aaKnown RBP4.92□□□□□ -1.62
CD44-236ENST00000533222 BTRCQ9Y297 605 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 STRAPQ9Y3F4 350 aaKnown RBP4.92□□□□□ -1.62
CD44-236ENST00000533222 PKP3Q9Y446 797 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 URGCP-MRPS24S4R325 110 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 COL4A3Q01955 1670 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 SLIT2O94813 1529 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 DDX60LQ5H9U9 1706 aaKnown RBP4.92□□□□□ -1.62
CD44-236ENST00000533222 LRRC37A3O60309 1634 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 NHSL1Q5SYE7 1610 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 SLX4Q8IY92 1834 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 A0A1W2PPC4 97 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 A0A1W2PPE3 182 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 OOEPA6NGQ2 149 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 ADM5C9JUS6 153 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 H3BN98 237 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 M0R296 226 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 BCKDKO14874 412 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 PCDH7O60245 1069 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 MPZL2O60487 215 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 SCGB2A1O75556 95 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 ANXA9O76027 345 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 OR6A2O95222 327 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 MT-CO2P00403 227 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 SERPIND1P05546 499 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 ANXA2P07355 339 aaKnown RBP4.91□□□□□ -1.62
CD44-236ENST00000533222 SNRPCP09234 159 aaKnown RBP4.91□□□□□ -1.62
CD44-236ENST00000533222 ZSCAN5DPP0CG00 497 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 RD3LP0DJH9 198 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 DRD1P21728 446 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 IMPA1P29218 277 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 SLC6A8P48029 635 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 NPBWR1P48145 328 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 SELENOWP63302 87 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 PAX2Q02962 417 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 MXD1Q05195 221 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 PLA2G7Q13093 441 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 AIMP2Q13155 320 aaKnown RBP4.91□□□□□ -1.62
CD44-236ENST00000533222 FHL2Q14192 279 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 UBE2V2Q15819 145 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 LY6KQ17RY6 165 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 IFI44LQ53G44 452 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 PYDC2Q56P42 97 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 KHDC3LQ587J8 217 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 ZNF789Q5FWF6 425 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 ARL13AQ5H913 290 aaPredicted RBP4.91□□□□□ -1.62
CD44-236ENST00000533222 LCE5AQ5TCM9 118 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 OR10K2Q6IF99 312 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 GRHL2Q6ISB3 625 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 FAM71F2Q6NXP2 309 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 ZNF613Q6PF04 617 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 TMEM205Q6UW68 189 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 APOOLQ6UXV4 268 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 CHST9Q7L1S5 443 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 MOGAT3Q86VF5 341 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 ZDHHC21Q8IVQ6 265 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 TMEM183AQ8IXX5 376 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 JAGN1Q8N5M9 183 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 TMEM185AQ8NFB2 350 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 GPR150Q8NGU9 434 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 OLIG1Q8TAK6 271 aa4.91□□□□□ -1.62
CD44-236ENST00000533222 BCL2L2Q92843 193 aaPredicted RBP4.91□□□□□ -1.62
CD44-236ENST00000533222 TOMM40LQ969M1 308 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms