RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 PRICKLE3O43900 615 aaPredicted RBP13.83□□□□□ -0.19
PCDHA3-202ENST00000532566 RAD52P43351 418 aa13.83□□□□□ -0.19
PCDHA3-202ENST00000532566 RAB5BP61020 215 aa13.83□□□□□ -0.19
PCDHA3-202ENST00000532566 RPL23AP62750 156 aaKnown RBP13.83□□□□□ -0.19
PCDHA3-202ENST00000532566 DUSP2Q05923 314 aa13.83□□□□□ -0.19
PCDHA3-202ENST00000532566 RBM39Q14498 530 aaKnown RBP13.83□□□□□ -0.19
PCDHA3-202ENST00000532566 ZXDCQ2QGD7 858 aaPredicted RBP13.83□□□□□ -0.19
PCDHA3-202ENST00000532566 TMEM178AQ8NBL3 297 aa13.83□□□□□ -0.19
PCDHA3-202ENST00000532566 C17orf47Q8NEP4 570 aa13.83□□□□□ -0.19
PCDHA3-202ENST00000532566 OR9K2Q8NGE7 335 aa13.83□□□□□ -0.19
PCDHA3-202ENST00000532566 SHPKQ9UHJ6 478 aa13.83□□□□□ -0.19
PCDHA3-202ENST00000532566 CES1P1Q9UKY3 287 aa13.83□□□□□ -0.19
PCDHA3-202ENST00000532566 LSM11P83369 360 aaKnown RBP eCLIP13.83□□□□□ -0.2
PCDHA3-202ENST00000532566 HLA-BQ31612 363 aa13.83□□□□□ -0.2
PCDHA3-202ENST00000532566 OR10K1Q8NGX5 313 aa13.83□□□□□ -0.2
PCDHA3-202ENST00000532566 SLC25A31Q9H0C2 315 aa13.83□□□□□ -0.2
PCDHA3-202ENST00000532566 GDF2Q9UK05 429 aaPredicted RBP13.83□□□□□ -0.2
PCDHA3-202ENST00000532566 A0A087WZY1 265 aa13.83□□□□□ -0.2
PCDHA3-202ENST00000532566 IGHV3-9P01782 118 aa13.83□□□□□ -0.2
PCDHA3-202ENST00000532566 CD3DP04234 171 aa13.83□□□□□ -0.2
PCDHA3-202ENST00000532566 IL2RGP31785 369 aa13.83□□□□□ -0.2
PCDHA3-202ENST00000532566 ECI1P42126 302 aa13.83□□□□□ -0.2
PCDHA3-202ENST00000532566 MZT1Q08AG7 82 aa13.83□□□□□ -0.2
PCDHA3-202ENST00000532566 DND1Q8IYX4 353 aaKnown RBP13.83□□□□□ -0.2
PCDHA3-202ENST00000532566 CMTM3Q96MX0 182 aa13.83□□□□□ -0.2
PCDHA3-202ENST00000532566 KCNJ16Q9NPI9 418 aa13.83□□□□□ -0.2
PCDHA3-202ENST00000532566 SULT1C2O00338 296 aa13.83□□□□□ -0.2
PCDHA3-202ENST00000532566 XRCC3O43542 346 aa13.83□□□□□ -0.2
PCDHA3-202ENST00000532566 CDKN2AP42771 156 aaKnown RBP13.83□□□□□ -0.2
PCDHA3-202ENST00000532566 UBE2IP63279 158 aaKnown RBP13.83□□□□□ -0.2
PCDHA3-202ENST00000532566 PCK2Q16822 640 aa13.83□□□□□ -0.2
PCDHA3-202ENST00000532566 IAH1Q2TAA2 248 aaPredicted RBP13.83□□□□□ -0.2
PCDHA3-202ENST00000532566 SECTM1Q8WVN6 248 aa13.83□□□□□ -0.2
PCDHA3-202ENST00000532566 APH1AQ96BI3 265 aa13.83□□□□□ -0.2
PCDHA3-202ENST00000532566 ARPC5LQ9BPX5 153 aa13.83□□□□□ -0.2
PCDHA3-202ENST00000532566 HRH4Q9H3N8 390 aa13.83□□□□□ -0.2
PCDHA3-202ENST00000532566 FLRT3Q9NZU0 649 aa13.83□□□□□ -0.2
PCDHA3-202ENST00000532566 CACNA1GO43497 2377 aa13.83□□□□□ -0.2
PCDHA3-202ENST00000532566 PLSCR5A0PG75 271 aa13.82□□□□□ -0.2
PCDHA3-202ENST00000532566 KRBOX1C9JBD0 128 aa13.82□□□□□ -0.2
PCDHA3-202ENST00000532566 NUPL2O15504 423 aaKnown RBP13.82□□□□□ -0.2
PCDHA3-202ENST00000532566 GPR137BO60478 399 aa13.82□□□□□ -0.2
PCDHA3-202ENST00000532566 GUSBP08236 651 aa13.82□□□□□ -0.2
PCDHA3-202ENST00000532566 RBP2P50120 134 aa13.82□□□□□ -0.2
PCDHA3-202ENST00000532566 CASP6P55212 293 aa13.82□□□□□ -0.2
PCDHA3-202ENST00000532566 PLA2G7Q13093 441 aa13.82□□□□□ -0.2
PCDHA3-202ENST00000532566 OIT3Q8WWZ8 545 aa13.82□□□□□ -0.2
PCDHA3-202ENST00000532566 BCO1Q9HAY6 547 aa13.82□□□□□ -0.2
PCDHA3-202ENST00000532566 EXOSC3Q9NQT5 275 aaKnown RBP13.82□□□□□ -0.2
PCDHA3-202ENST00000532566 HAO2Q9NYQ3 351 aa13.82□□□□□ -0.2
PCDHA3-202ENST00000532566 PLEKHB1Q9UF11 243 aaPredicted RBP13.82□□□□□ -0.2
PCDHA3-202ENST00000532566 BHLHE40O14503 412 aa13.82□□□□□ -0.2
PCDHA3-202ENST00000532566 WDR5BQ86VZ2 330 aa13.82□□□□□ -0.2
PCDHA3-202ENST00000532566 NUDCD2Q8WVJ2 157 aa13.82□□□□□ -0.2
PCDHA3-202ENST00000532566 C4orf45Q96LM5 186 aa13.82□□□□□ -0.2
PCDHA3-202ENST00000532566 CCDC86Q9H6F5 360 aaKnown RBP13.82□□□□□ -0.2
PCDHA3-202ENST00000532566 RAB9BQ9NP90 201 aa13.82□□□□□ -0.2
PCDHA3-202ENST00000532566 LRP12Q9Y561 859 aa13.82□□□□□ -0.2
PCDHA3-202ENST00000532566 IGKV1-8A0A0C4DH67 115 aa13.82□□□□□ -0.2
PCDHA3-202ENST00000532566 FAM166BA8MTA8 275 aa13.82□□□□□ -0.2
PCDHA3-202ENST00000532566 NTN1O95631 604 aa13.82□□□□□ -0.2
PCDHA3-202ENST00000532566 GUSBP11Q6P575 273 aa13.82□□□□□ -0.2
PCDHA3-202ENST00000532566 LSMEM1Q8N8F7 131 aa13.82□□□□□ -0.2
PCDHA3-202ENST00000532566 ARL5BQ96KC2 179 aa13.82□□□□□ -0.2
PCDHA3-202ENST00000532566 GPR173Q9NS66 373 aa13.82□□□□□ -0.2
PCDHA3-202ENST00000532566 SNRPGP15A8MWD9 76 aa13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 DHHO43323 396 aa13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 CXCL13O43927 109 aa13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 ABOP16442 354 aa13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 EBPQ15125 230 aaKnown RBP13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 TSC22D1Q15714 1073 aa13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 RHOUQ7L0Q8 258 aa13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 OR52H1Q8NGJ2 320 aa13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 C11orf40Q8WZ69 217 aa13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 MOGAT1Q96PD6 335 aa13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 OCSTAMPQ9BR26 566 aa13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 TWSG1Q9GZX9 223 aa13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 C12orf10Q9HB07 376 aa13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 LUZP4Q9P127 313 aa13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 OR14J1Q9UGF5 321 aa13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 APC2O95996 2303 aa13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 CDONQ4KMG0 1287 aa13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 TCTE3Q8IZS6 198 aa13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 LRFN1Q9P244 771 aa13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 HSPB6O14558 160 aa13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 CCSO14618 274 aa13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 GCM2O75603 506 aaPredicted RBP13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 IGHA1P01876 353 aa13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 SRPXP78539 464 aa13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 WDR38Q5JTN6 314 aa13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 ZAR1Q86SH2 424 aa13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 TIMM10BQ9Y5J6 103 aa13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 AHCTF1Q8WYP5 2266 aa13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 PDGFAP04085 211 aa13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 ALOX5APP20292 161 aa13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 TUBG1P23258 451 aa13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 LUMP51884 338 aaPredicted RBP13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 SHBQ15464 509 aa13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 KRBOX4Q5JUW0 171 aa13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 TMUB2Q71RG4 321 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms