RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 AADACL4Q5VUY2 407 aa1.96□□□□□ -2.1
CD44-234ENST00000531873 ADNP2Q6IQ32 1131 aa1.96□□□□□ -2.1
CD44-234ENST00000531873 CEMP1Q6PRD7 247 aaPredicted RBP1.96□□□□□ -2.1
CD44-234ENST00000531873 PLET1Q6UQ28 207 aa1.96□□□□□ -2.1
CD44-234ENST00000531873 C6orf120Q7Z4R8 191 aa1.96□□□□□ -2.1
CD44-234ENST00000531873 HORMAD1Q86X24 394 aa1.96□□□□□ -2.1
CD44-234ENST00000531873 MYOCDQ8IZQ8 938 aa1.96□□□□□ -2.1
CD44-234ENST00000531873 FAM86B1Q8N7N1 296 aa1.96□□□□□ -2.1
CD44-234ENST00000531873 C11orf72Q8NBR9 251 aa1.96□□□□□ -2.1
CD44-234ENST00000531873 MDS2Q8NDY4 140 aa1.96□□□□□ -2.1
CD44-234ENST00000531873 OR5T3Q8NGG3 340 aa1.96□□□□□ -2.1
CD44-234ENST00000531873 MITD1Q8WV92 249 aa1.96□□□□□ -2.1
CD44-234ENST00000531873 GIMAP1Q8WWP7 306 aa1.96□□□□□ -2.1
CD44-234ENST00000531873 BAALCQ8WXS3 180 aa1.96□□□□□ -2.1
CD44-234ENST00000531873 ISOC2Q96AB3 205 aa1.96□□□□□ -2.1
CD44-234ENST00000531873 MRGPRFQ96AM1 343 aa1.96□□□□□ -2.1
CD44-234ENST00000531873 NRBF2Q96F24 287 aa1.96□□□□□ -2.1
CD44-234ENST00000531873 DYNLL2Q96FJ2 89 aa1.96□□□□□ -2.1
CD44-234ENST00000531873 RNF145Q96MT1 663 aa1.96□□□□□ -2.1
CD44-234ENST00000531873 UQCC2Q9BRT2 126 aa1.96□□□□□ -2.1
CD44-234ENST00000531873 LINC00597Q9H2U6 94 aa1.96□□□□□ -2.1
CD44-234ENST00000531873 PATZ1Q9HBE1 687 aaKnown RBP1.96□□□□□ -2.1
CD44-234ENST00000531873 ZC4H2Q9NQZ6 224 aa1.96□□□□□ -2.1
CD44-234ENST00000531873 DYRK4Q9NR20 520 aa1.96□□□□□ -2.1
CD44-234ENST00000531873 ANAPC11Q9NYG5 84 aa1.96□□□□□ -2.1
CD44-234ENST00000531873 RPS6KB2Q9UBS0 482 aa1.96□□□□□ -2.1
CD44-234ENST00000531873 MTFP1Q9UDX5 166 aa1.96□□□□□ -2.1
CD44-234ENST00000531873 KPTNQ9Y664 436 aa1.96□□□□□ -2.1
CD44-234ENST00000531873 CACNG2Q9Y698 323 aa1.96□□□□□ -2.1
CD44-234ENST00000531873 HECW2Q9P2P5 1572 aa1.96□□□□□ -2.1
CD44-234ENST00000531873 DYSFO75923 2080 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 MN1Q10571 1320 aaPredicted RBP1.95□□□□□ -2.1
CD44-234ENST00000531873 MROH7Q68CQ1 1323 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 TMEM131Q92545 1883 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 TRAV6A0A075B6T7 132 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 IGHV3-74A0A0B4J1X5 117 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 A0A1B0GUA9 196 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 NKX2-6A6NCS4 301 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 H7C0C1 242 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 XRCC2O43543 280 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 SPOPO43791 374 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 GMDSO60547 372 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 HPRT1P00492 218 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 S100A9P06702 114 aaKnown RBP1.95□□□□□ -2.1
CD44-234ENST00000531873 PNMA6AP0CW24 399 aaPredicted RBP1.95□□□□□ -2.1
CD44-234ENST00000531873 PGA5P0DJD9 388 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 RAB3BP20337 219 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 BMI1P35226 326 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 LONP1P36776 959 aaKnown RBP1.95□□□□□ -2.1
CD44-234ENST00000531873 CEACAM6P40199 344 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 CYB561P49447 251 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 ZNF121P58317 390 aaPredicted RBP1.95□□□□□ -2.1
CD44-234ENST00000531873 PPP1CBP62140 327 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 CDH17Q12864 832 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 IFT88Q13099 833 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 PRPSAP1Q14558 356 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 QPRTQ15274 297 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 GCSAMLQ5JQS6 135 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 HES5Q5TA89 166 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 SLC25A25Q6KCM7 469 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 C16orf87Q6PH81 154 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 WDR82Q6UXN9 313 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 ABHD13Q7L211 337 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 FAM71AQ8IYT1 594 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 VKORC1L1Q8N0U8 176 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 KIF2BQ8N4N8 673 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 CHST4Q8NCG5 386 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 TMEM104Q8NE00 496 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 FBXO36Q8NEA4 188 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 OR10W1Q8NGF6 305 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 OR51L1Q8NGJ5 315 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 TCP10LQ8TDR4 215 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 LRRC29Q8WV35 223 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 CACNG8Q8WXS5 425 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 FAM210BQ96KR6 192 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 CHID1Q9BWS9 393 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 SAV1Q9H4B6 383 aaPredicted RBP1.95□□□□□ -2.1
CD44-234ENST00000531873 UBE2ZQ9H832 354 aaPredicted RBP1.95□□□□□ -2.1
CD44-234ENST00000531873 MRM3Q9HC36 420 aaKnown RBP1.95□□□□□ -2.1
CD44-234ENST00000531873 RBAKQ9NYW8 714 aaPredicted RBP1.95□□□□□ -2.1
CD44-234ENST00000531873 UVRAGQ9P2Y5 699 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 DDX19BQ9UMR2 479 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 COMMD3-BMI1R4GMX3 469 aa1.95□□□□□ -2.1
CD44-234ENST00000531873 ASTN1O14525 1302 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 TRBV6-6A0A0A6YYG2 114 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 IGHV3-66A0A0C4DH42 116 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 PINLYPA6NC86 204 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 A8MU10 97 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 INS-IGF2F8WCM5 200 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 NDUFS8O00217 210 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 PES1O00541 588 aaKnown RBP1.94□□□□□ -2.1
CD44-234ENST00000531873 NMT2O60551 498 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 MPDU1O75352 247 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 RDH16O75452 317 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 CA11O75493 328 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 HSBP1O75506 76 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 CATP04040 527 aaKnown RBP1.94□□□□□ -2.1
CD44-234ENST00000531873 CD3GP09693 182 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 TLX1NBP0CAT3 122 aa1.94□□□□□ -2.1
CD44-234ENST00000531873 DNAH10OSP0CZ25 163 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms