RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 OR8J3Q8NGG0 315 aa7.44□□□□□ -1.22
USF1-210ENST00000531842 MRAPQ8TCY5 172 aa7.44□□□□□ -1.22
USF1-210ENST00000531842 TMEM255BQ8WV15 326 aa7.44□□□□□ -1.22
USF1-210ENST00000531842 TMEM239Q8WW34 195 aa7.44□□□□□ -1.22
USF1-210ENST00000531842 RCN3Q96D15 328 aa7.44□□□□□ -1.22
USF1-210ENST00000531842 RBP7Q96R05 134 aa7.44□□□□□ -1.22
USF1-210ENST00000531842 SH3GL1Q99961 368 aa7.44□□□□□ -1.22
USF1-210ENST00000531842 ECSITQ9BQ95 431 aa7.44□□□□□ -1.22
USF1-210ENST00000531842 PRSS27Q9BQR3 290 aa7.44□□□□□ -1.22
USF1-210ENST00000531842 CYSLTR2Q9NS75 346 aa7.44□□□□□ -1.22
USF1-210ENST00000531842 C20orf141Q9NUB4 165 aa7.44□□□□□ -1.22
USF1-210ENST00000531842 STX18Q9P2W9 335 aaKnown RBP7.44□□□□□ -1.22
USF1-210ENST00000531842 CTSZQ9UBR2 303 aa7.44□□□□□ -1.22
USF1-210ENST00000531842 RIMS3Q9UJD0 308 aa7.44□□□□□ -1.22
USF1-210ENST00000531842 BAG5Q9UL15 447 aa7.44□□□□□ -1.22
USF1-210ENST00000531842 A0A1W2PPL8 197 aa7.43□□□□□ -1.22
USF1-210ENST00000531842 GMNCA6NCL1 334 aa7.43□□□□□ -1.22
USF1-210ENST00000531842 NME4O00746 187 aa7.43□□□□□ -1.22
USF1-210ENST00000531842 PIP5K1CO60331 668 aa7.43□□□□□ -1.22
USF1-210ENST00000531842 OR5F1O95221 314 aa7.43□□□□□ -1.22
USF1-210ENST00000531842 CSF1P09603 554 aa7.43□□□□□ -1.22
USF1-210ENST00000531842 COX4I1P13073 169 aa7.43□□□□□ -1.22
USF1-210ENST00000531842 IFNA8P32881 189 aa7.43□□□□□ -1.22
USF1-210ENST00000531842 CFHR2P36980 270 aa7.43□□□□□ -1.22
USF1-210ENST00000531842 RBM34P42696 430 aaKnown RBP7.43□□□□□ -1.22
USF1-210ENST00000531842 ARHGDIAP52565 204 aa7.43□□□□□ -1.22
USF1-210ENST00000531842 PCBD1P61457 104 aa7.43□□□□□ -1.22
USF1-210ENST00000531842 ELF3P78545 371 aaPredicted RBP7.43□□□□□ -1.22
USF1-210ENST00000531842 PIN1Q13526 163 aaPredicted RBP7.43□□□□□ -1.22
USF1-210ENST00000531842 HSP90B2PQ58FF3 399 aa7.43□□□□□ -1.22
USF1-210ENST00000531842 ARMC4Q5T2S8 1044 aa7.43□□□□□ -1.22
USF1-210ENST00000531842 WDR25Q64LD2 544 aaPredicted RBP7.43□□□□□ -1.22
USF1-210ENST00000531842 OR2T2Q6IF00 324 aa7.43□□□□□ -1.22
USF1-210ENST00000531842 ARL9Q6T311 187 aa7.43□□□□□ -1.22
USF1-210ENST00000531842 TSEN54Q7Z6J9 526 aaKnown RBP7.43□□□□□ -1.22
USF1-210ENST00000531842 NKAIN4Q8IVV8 208 aa7.43□□□□□ -1.22
USF1-210ENST00000531842 SLC15A3Q8IY34 581 aa7.43□□□□□ -1.22
USF1-210ENST00000531842 ATG16L2Q8NAA4 619 aa7.43□□□□□ -1.22
USF1-210ENST00000531842 BHLHE23Q8NDY6 225 aa7.43□□□□□ -1.22
USF1-210ENST00000531842 LHX4Q969G2 390 aa7.43□□□□□ -1.22
USF1-210ENST00000531842 NEIL1Q96FI4 390 aaPredicted RBP7.43□□□□□ -1.22
USF1-210ENST00000531842 MEGF10Q96KG7 1140 aa7.43□□□□□ -1.22
USF1-210ENST00000531842 SEPHS2Q99611 448 aa7.43□□□□□ -1.22
USF1-210ENST00000531842 ELAC2Q9BQ52 826 aaKnown RBP7.43□□□□□ -1.22
USF1-210ENST00000531842 ZNF426Q9BUY5 554 aa7.43□□□□□ -1.22
USF1-210ENST00000531842 PCDHAC1Q9H158 963 aa7.43□□□□□ -1.22
USF1-210ENST00000531842 WDR76Q9H967 626 aa7.43□□□□□ -1.22
USF1-210ENST00000531842 PTTG3PQ9NZH4 202 aa7.43□□□□□ -1.22
USF1-210ENST00000531842 DNAJB11Q9UBS4 358 aa7.43□□□□□ -1.22
USF1-210ENST00000531842 IL20RAQ9UHF4 553 aa7.43□□□□□ -1.22
USF1-210ENST00000531842 FOXJ3Q9UPW0 622 aa7.43□□□□□ -1.22
USF1-210ENST00000531842 MED31Q9Y3C7 131 aa7.43□□□□□ -1.22
USF1-210ENST00000531842 TIMM10BQ9Y5J6 103 aa7.43□□□□□ -1.22
USF1-210ENST00000531842 DNAH9Q9NYC9 4486 aa7.43□□□□□ -1.22
USF1-210ENST00000531842 ZNF816-ZNF321PA0A0X1KG74 233 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 A0A1W2PRD5 423 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 A0A1W2PRF3 423 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 A0A1W2PRM7 423 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 BBIP1A8MTZ0 92 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 IMPA2O14732 288 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 TNFRSF13BO14836 293 aaPredicted RBP7.42□□□□□ -1.22
USF1-210ENST00000531842 SLC22A2O15244 555 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 MLNRO43193 412 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 SNX3O60493 162 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 ABHD16AO95870 558 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 NPPAP01160 153 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 HLA-DPB1P04440 258 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 DBHP09172 617 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 PPIAL4GP0DN37 164 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 MMP9P14780 707 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 TNFRSF1AP19438 455 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 LIPAP38571 399 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 OR1E2P47887 323 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 ZNF133P52736 654 aaPredicted RBP7.42□□□□□ -1.22
USF1-210ENST00000531842 POU4F2Q12837 409 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 ZNF404Q494X3 552 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 ALG10Q5BKT4 473 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 ZMAT1Q5H9K5 638 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 KPRPQ5T749 579 aaPredicted RBP7.42□□□□□ -1.22
USF1-210ENST00000531842 FAM27BQ5VT28 67 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 PRAMEF6Q5VXH4 476 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 MICU2Q8IYU8 434 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 PNKDQ8N490 385 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 PIP4P2Q8N4L2 257 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 BOLLQ8N9W6 283 aaKnown RBP7.42□□□□□ -1.22
USF1-210ENST00000531842 OR8B3Q8NGG8 313 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 RP9Q8TA86 221 aaKnown RBP7.42□□□□□ -1.22
USF1-210ENST00000531842 TPD52L3Q96J77 140 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 OR8B2Q96RD0 313 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 SLC30A2Q9BRI3 323 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 POLR2J2Q9GZM3 115 aaKnown RBP7.42□□□□□ -1.22
USF1-210ENST00000531842 POLR2J3Q9H1A7 115 aaKnown RBP7.42□□□□□ -1.22
USF1-210ENST00000531842 TXNIPQ9H3M7 391 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 SMURF2Q9HAU4 748 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 ELOVL3Q9HB03 270 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 SMURF1Q9HCE7 757 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 NOX4Q9NPH5 578 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 CLN8Q9UBY8 286 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 IL19Q9UHD0 177 aa7.42□□□□□ -1.22
USF1-210ENST00000531842 TMCC3Q9ULS5 477 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms