RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 CLIC3O95833 236 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 IGHA1P01876 353 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 GNAO1P09471 354 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 CLUP10909 449 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 ATP6V1B1P15313 513 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 ZNF14P17017 642 aaPredicted RBP6.9□□□□□ -1.3
SSBP3-211ENST00000528787 EDNRAP25101 427 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 GCH1P30793 250 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 SLC6A9P48067 706 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 MMP16P51512 607 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 ZNF83P51522 516 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 GBX2P52951 348 aaPredicted RBP6.9□□□□□ -1.3
SSBP3-211ENST00000528787 PIGFQ07326 219 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 ST3GAL4Q11206 333 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 RAB39AQ14964 217 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 ZNF718Q3SXZ3 478 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 KCTD21Q4G0X4 260 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 SP5Q6BEB4 398 aaPredicted RBP6.9□□□□□ -1.3
SSBP3-211ENST00000528787 AHSA2Q719I0 299 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 PRSS48Q7RTY5 328 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.9□□□□□ -1.3
SSBP3-211ENST00000528787 ZNF283Q8N7M2 679 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 ACBD4Q8NC06 268 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 NUP37Q8NFH4 326 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 BBS1Q8NFJ9 593 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 OR52N1Q8NH53 320 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 CNIH3Q8TBE1 160 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 ST7LQ8TDW4 575 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 LGALS12Q96DT0 336 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 C14orf79Q96F83 325 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 ZNF799Q96GE5 643 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 ZC3HAV1LQ96H79 300 aaKnown RBP6.9□□□□□ -1.3
SSBP3-211ENST00000528787 C4orf45Q96LM5 186 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 OR8B4Q96RC9 309 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 DOK1Q99704 481 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 ABHD6Q9BV23 337 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 CDCA4Q9BXL8 241 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 COMMD4Q9H0A8 199 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 ZNF442Q9H7R0 627 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 NPDC1Q9NQX5 325 aaPredicted RBP6.9□□□□□ -1.3
SSBP3-211ENST00000528787 CYSLTR2Q9NS75 346 aa6.9□□□□□ -1.3
SSBP3-211ENST00000528787 TMEM269A0A1B0GVZ9 245 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 A0A1W2PQL4 384 aaPredicted RBP6.89□□□□□ -1.31
SSBP3-211ENST00000528787 PTGES3LE9PB15 166 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 F5H5K5 113 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 ABCD4O14678 606 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 RER1O15258 196 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 SELENOFO60613 162 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 SEC14L2O76054 403 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 MPZL1O95297 269 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 CDK1P06493 297 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 MRPL3P09001 348 aaKnown RBP6.89□□□□□ -1.31
SSBP3-211ENST00000528787 CECR9P0C854 216 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 UBCP0CG48 685 aaKnown RBP6.89□□□□□ -1.31
SSBP3-211ENST00000528787 CCNOP22674 350 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 NR4A1P22736 598 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 CRHBPP24387 322 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 PSMA1P25786 263 aaKnown RBP6.89□□□□□ -1.31
SSBP3-211ENST00000528787 CCKARP32238 428 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 GLRXP35754 106 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 DDOSTP39656 456 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 OPRL1P41146 370 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 EVX1P49640 407 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 CCR9P51686 369 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 CHN2P52757 468 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 UCP2P55851 309 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 PSMA6P60900 246 aaKnown RBP6.89□□□□□ -1.31
SSBP3-211ENST00000528787 NAAAQ02083 359 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 BDH1Q02338 343 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 TRAM1Q15629 374 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 MEP1BQ16820 701 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 CDONQ4KMG0 1287 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 CCDC92Q53HC0 331 aaPredicted RBP6.89□□□□□ -1.31
SSBP3-211ENST00000528787 ALKBH2Q6NS38 261 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 ADAM5Q6NVV9 412 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 ZNF774Q6NX45 483 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 ZNF704Q6ZNC4 412 aaPredicted RBP6.89□□□□□ -1.31
SSBP3-211ENST00000528787 C20orf204Q6ZNR8 217 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 LINC00346Q8IVM7 164 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 YIPF7Q8N8F6 280 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 LINC01560Q8TB33 94 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 APH1BQ8WW43 257 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 FBXW5Q969U6 566 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 C10orf35Q96D05 121 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 PLPPR2Q96GM1 343 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 ALG8Q9BVK2 526 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 SLC22A4Q9H015 551 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 WNT5BQ9H1J7 359 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 ERVK13-1Q9NX77 482 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 SLCO1C1Q9NYB5 712 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 CRIM1Q9NZV1 1036 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 PLEKHB1Q9UF11 243 aaPredicted RBP6.89□□□□□ -1.31
SSBP3-211ENST00000528787 GNG8Q9UK08 70 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 CMAHPQ9Y471 501 aa6.89□□□□□ -1.31
SSBP3-211ENST00000528787 A0A087WXM4 84 aa6.88□□□□□ -1.31
SSBP3-211ENST00000528787 IGHV1-18A0A0C4DH31 117 aa6.88□□□□□ -1.31
SSBP3-211ENST00000528787 A0A0U1RQV5 110 aa6.88□□□□□ -1.31
SSBP3-211ENST00000528787 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.88□□□□□ -1.31
SSBP3-211ENST00000528787 PLSCR5A0PG75 271 aa6.88□□□□□ -1.31
SSBP3-211ENST00000528787 TMEM212A6NML5 194 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms