RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 STX19Q8N4C7 294 aa10.58□□□□□ -0.72
TRAF3IP2-211ENST00000528599 CPEB3Q8NE35 698 aaKnown RBP10.58□□□□□ -0.72
TRAF3IP2-211ENST00000528599 NANOS1Q8WY41 292 aaKnown RBP10.58□□□□□ -0.72
TRAF3IP2-211ENST00000528599 HSD17B8Q92506 261 aa10.58□□□□□ -0.72
TRAF3IP2-211ENST00000528599 RORBQ92753 470 aa10.58□□□□□ -0.72
TRAF3IP2-211ENST00000528599 MYDGFQ969H8 173 aa10.58□□□□□ -0.72
TRAF3IP2-211ENST00000528599 COG8Q96MW5 612 aa10.58□□□□□ -0.72
TRAF3IP2-211ENST00000528599 MNTQ99583 582 aa10.58□□□□□ -0.72
TRAF3IP2-211ENST00000528599 USB1Q9BQ65 265 aaKnown RBP10.58□□□□□ -0.72
TRAF3IP2-211ENST00000528599 WACQ9BTA9 647 aa10.58□□□□□ -0.72
TRAF3IP2-211ENST00000528599 JAM3Q9BX67 310 aa10.58□□□□□ -0.72
TRAF3IP2-211ENST00000528599 C1orf198Q9H425 327 aa10.58□□□□□ -0.72
TRAF3IP2-211ENST00000528599 ERVK13-1Q9NX77 482 aa10.58□□□□□ -0.72
TRAF3IP2-211ENST00000528599 TMEM14AQ9Y6G1 99 aa10.58□□□□□ -0.72
TRAF3IP2-211ENST00000528599 PRR14LQ5THK1 2151 aa10.58□□□□□ -0.72
TRAF3IP2-211ENST00000528599 DAPL1A0PJW8 107 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 ZNF670-ZNF695F2Z2N8 137 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 PSMD9O00233 223 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 SGCEO43556 437 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 CELA3BP08861 270 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 CBR1P16152 277 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 PPP3CBP16298 524 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 ACTC1P68032 377 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 ACTA1P68133 377 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 ELFN2Q5R3F8 820 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 ZNF322Q6U7Q0 402 aaPredicted RBP10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 MYPOPQ86VE0 399 aaPredicted RBP10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 ANKRD13BQ86YJ7 626 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 LINC01560Q8TB33 94 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 RNF133Q8WVZ7 376 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 FCGR1BQ92637 280 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 MUCL1Q96DR8 90 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 SLAMF6Q96DU3 332 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 ZC3HAV1LQ96H79 300 aaKnown RBP10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 MS4A3Q96HJ5 214 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 CENPMQ9NSP4 180 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 SLCO1C1Q9NYB5 712 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 PLEK2Q9NYT0 353 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 NPAP1Q9NZP6 1156 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 CLEC2DQ9UHP7 191 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 TACC2O95359 2948 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 OR6C6A6NF89 314 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 SYNGR3O43761 229 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 DOK2O60496 412 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 MT-ND2P03891 347 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 ZNF14P17017 642 aaPredicted RBP10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 IDH3GP51553 393 aaPredicted RBP10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 GALEQ14376 348 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 RAB35Q15286 201 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 RSPO1Q2MKA7 263 aaPredicted RBP10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 ZNF684Q5T5D7 378 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 UBE2UQ5VVX9 321 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 LRRN1Q6UXK5 716 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 ASB17Q8WXJ9 295 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 SLC7A6Q92536 515 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 OR8B4Q96RC9 309 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 MED18Q9BUE0 208 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 CCDC90BQ9GZT6 254 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 ACOT13Q9NPJ3 140 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 INPP5EQ9NRR6 644 aa10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 CRNNQ9UBG3 495 aaPredicted RBP10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 PLEKHB1Q9UF11 243 aaPredicted RBP10.57□□□□□ -0.72
TRAF3IP2-211ENST00000528599 PHYHO14832 338 aa10.56□□□□□ -0.72
TRAF3IP2-211ENST00000528599 NOL3O60936 208 aaKnown RBP10.56□□□□□ -0.72
TRAF3IP2-211ENST00000528599 IGKV3-15P01624 115 aa10.56□□□□□ -0.72
TRAF3IP2-211ENST00000528599 IGLV1-44P01699 117 aa10.56□□□□□ -0.72
TRAF3IP2-211ENST00000528599 SERPINA5P05154 406 aa10.56□□□□□ -0.72
TRAF3IP2-211ENST00000528599 APEX1P27695 318 aaKnown RBP10.56□□□□□ -0.72
TRAF3IP2-211ENST00000528599 OPRL1P41146 370 aa10.56□□□□□ -0.72
TRAF3IP2-211ENST00000528599 ZNF83P51522 516 aa10.56□□□□□ -0.72
TRAF3IP2-211ENST00000528599 GP2P55259 537 aaKnown RBP10.56□□□□□ -0.72
TRAF3IP2-211ENST00000528599 ROM1Q03395 351 aa10.56□□□□□ -0.72
TRAF3IP2-211ENST00000528599 IRF3Q14653 427 aa10.56□□□□□ -0.72
TRAF3IP2-211ENST00000528599 TBCEQ15813 527 aaPredicted RBP10.56□□□□□ -0.72
TRAF3IP2-211ENST00000528599 C1QTNF12Q5T7M4 302 aa10.56□□□□□ -0.72
TRAF3IP2-211ENST00000528599 WFDC8Q8IUA0 241 aa10.56□□□□□ -0.72
TRAF3IP2-211ENST00000528599 FAM169BQ8N8A8 192 aa10.56□□□□□ -0.72
TRAF3IP2-211ENST00000528599 OR1F12Q8NHA8 337 aa10.56□□□□□ -0.72
TRAF3IP2-211ENST00000528599 ATF6BQ99941 703 aa10.56□□□□□ -0.72
TRAF3IP2-211ENST00000528599 ALG8Q9BVK2 526 aa10.56□□□□□ -0.72
TRAF3IP2-211ENST00000528599 CDCA4Q9BXL8 241 aa10.56□□□□□ -0.72
TRAF3IP2-211ENST00000528599 HDHD2Q9H0R4 259 aa10.56□□□□□ -0.72
TRAF3IP2-211ENST00000528599 DDX28Q9NUL7 540 aaKnown RBP10.56□□□□□ -0.72
TRAF3IP2-211ENST00000528599 NDRG3Q9UGV2 375 aa10.56□□□□□ -0.72
TRAF3IP2-211ENST00000528599 MRM2Q9UI43 246 aaKnown RBP10.56□□□□□ -0.72
TRAF3IP2-211ENST00000528599 EXOSC1Q9Y3B2 195 aaKnown RBP10.56□□□□□ -0.72
TRAF3IP2-211ENST00000528599 LOC100509620A0A075B734 347 aa10.55□□□□□ -0.72
TRAF3IP2-211ENST00000528599 IGHV1-18A0A0C4DH31 117 aa10.55□□□□□ -0.72
TRAF3IP2-211ENST00000528599 TUBAL3A6NHL2 446 aa10.55□□□□□ -0.72
TRAF3IP2-211ENST00000528599 ZNF878C9JN71 531 aa10.55□□□□□ -0.72
TRAF3IP2-211ENST00000528599 INMTO95050 263 aa10.55□□□□□ -0.72
TRAF3IP2-211ENST00000528599 ATE1O95260 518 aa10.55□□□□□ -0.72
TRAF3IP2-211ENST00000528599 DBHP09172 617 aa10.55□□□□□ -0.72
TRAF3IP2-211ENST00000528599 CCL2P13500 99 aa10.55□□□□□ -0.72
TRAF3IP2-211ENST00000528599 MYL12AP19105 171 aa10.55□□□□□ -0.72
TRAF3IP2-211ENST00000528599 CRYGSP22914 178 aa10.55□□□□□ -0.72
TRAF3IP2-211ENST00000528599 HTR5AP47898 357 aa10.55□□□□□ -0.72
TRAF3IP2-211ENST00000528599 OR12D2P58182 307 aa10.55□□□□□ -0.72
TRAF3IP2-211ENST00000528599 PLP2Q04941 152 aa10.55□□□□□ -0.72
TRAF3IP2-211ENST00000528599 EGR3Q06889 387 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms