RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 ZFAND2BQ8WV99 257 aa12.06□□□□□ -0.48
CAPN1-212ENST00000527887 LRTOMTQ8WZ04 291 aa12.06□□□□□ -0.48
CAPN1-212ENST00000527887 C7orf34Q96L11 122 aa12.06□□□□□ -0.48
CAPN1-212ENST00000527887 DHRS1Q96LJ7 313 aa12.06□□□□□ -0.48
CAPN1-212ENST00000527887 DCLRE1CQ96SD1 692 aaKnown RBP12.06□□□□□ -0.48
CAPN1-212ENST00000527887 WIPI2Q9Y4P8 454 aa12.06□□□□□ -0.48
CAPN1-212ENST00000527887 J3QLI3 93 aa12.05□□□□□ -0.48
CAPN1-212ENST00000527887 IMPA2O14732 288 aa12.05□□□□□ -0.48
CAPN1-212ENST00000527887 TIPRLO75663 272 aa12.05□□□□□ -0.48
CAPN1-212ENST00000527887 TXNDC12O95881 172 aa12.05□□□□□ -0.48
CAPN1-212ENST00000527887 PNPP00491 289 aa12.05□□□□□ -0.48
CAPN1-212ENST00000527887 NGFP01138 241 aa12.05□□□□□ -0.48
CAPN1-212ENST00000527887 ZNF26P17031 533 aaPredicted RBP12.05□□□□□ -0.48
CAPN1-212ENST00000527887 CRABP1P29762 137 aa12.05□□□□□ -0.48
CAPN1-212ENST00000527887 OMPP47874 163 aa12.05□□□□□ -0.48
CAPN1-212ENST00000527887 HTR5AP47898 357 aa12.05□□□□□ -0.48
CAPN1-212ENST00000527887 RGS6P49758 472 aa12.05□□□□□ -0.48
CAPN1-212ENST00000527887 RPS6KA3P51812 740 aa12.05□□□□□ -0.48
CAPN1-212ENST00000527887 GLO1Q04760 184 aa12.05□□□□□ -0.48
CAPN1-212ENST00000527887 PSG7Q13046 419 aa12.05□□□□□ -0.48
CAPN1-212ENST00000527887 CDK5R2Q13319 367 aa12.05□□□□□ -0.48
CAPN1-212ENST00000527887 KRR1Q13601 381 aaKnown RBP12.05□□□□□ -0.48
CAPN1-212ENST00000527887 FGD3Q5JSP0 725 aa12.05□□□□□ -0.48
CAPN1-212ENST00000527887 SHQ1Q6PI26 577 aaKnown RBP12.05□□□□□ -0.48
CAPN1-212ENST00000527887 DNM1P34Q6PK57 102 aa12.05□□□□□ -0.48
CAPN1-212ENST00000527887 CCL17Q92583 94 aa12.05□□□□□ -0.48
CAPN1-212ENST00000527887 NRBF2Q96F24 287 aa12.05□□□□□ -0.48
CAPN1-212ENST00000527887 FAM46AQ96IP4 442 aaKnown RBP12.05□□□□□ -0.48
CAPN1-212ENST00000527887 ZNF184Q99676 751 aaPredicted RBP12.05□□□□□ -0.48
CAPN1-212ENST00000527887 C9orf16Q9BUW7 83 aa12.05□□□□□ -0.48
CAPN1-212ENST00000527887 A0A0G2JMP0 313 aa12.04□□□□□ -0.48
CAPN1-212ENST00000527887 A0A0X1KG70 313 aa12.04□□□□□ -0.48
CAPN1-212ENST00000527887 ZSCAN5BA6NJL1 495 aa12.04□□□□□ -0.48
CAPN1-212ENST00000527887 H7C1C5 153 aa12.04□□□□□ -0.48
CAPN1-212ENST00000527887 SURF4O15260 269 aa12.04□□□□□ -0.48
CAPN1-212ENST00000527887 TIMM8AO60220 97 aaPredicted RBP12.04□□□□□ -0.48
CAPN1-212ENST00000527887 DOK2O60496 412 aa12.04□□□□□ -0.48
CAPN1-212ENST00000527887 SLC16A7O60669 478 aa12.04□□□□□ -0.48
CAPN1-212ENST00000527887 MPZL1O95297 269 aa12.04□□□□□ -0.48
CAPN1-212ENST00000527887 IGHV2-5P01817 119 aa12.04□□□□□ -0.48
CAPN1-212ENST00000527887 SCG5P05408 212 aa12.04□□□□□ -0.48
CAPN1-212ENST00000527887 CTLA4P16410 223 aa12.04□□□□□ -0.48
CAPN1-212ENST00000527887 TNFRSF1AP19438 455 aa12.04□□□□□ -0.48
CAPN1-212ENST00000527887 KITLGP21583 273 aa12.04□□□□□ -0.48
CAPN1-212ENST00000527887 IFNGR2P38484 337 aa12.04□□□□□ -0.48
CAPN1-212ENST00000527887 LCN6P62502 163 aa12.04□□□□□ -0.48
CAPN1-212ENST00000527887 KCNMB1Q16558 191 aa12.04□□□□□ -0.48
CAPN1-212ENST00000527887 FAHD2BQ6P2I3 314 aaPredicted RBP12.04□□□□□ -0.48
CAPN1-212ENST00000527887 SMARCD3Q6STE5 483 aa12.04□□□□□ -0.48
CAPN1-212ENST00000527887 VASH1Q7L8A9 365 aaPredicted RBP12.04□□□□□ -0.48
CAPN1-212ENST00000527887 ZDHHC21Q8IVQ6 265 aa12.04□□□□□ -0.48
CAPN1-212ENST00000527887 FAM86B1Q8N7N1 296 aa12.04□□□□□ -0.48
CAPN1-212ENST00000527887 OR4M2Q8NGB6 313 aa12.04□□□□□ -0.48
CAPN1-212ENST00000527887 OR5L1Q8NGL2 311 aa12.04□□□□□ -0.48
CAPN1-212ENST00000527887 PTP4A1Q93096 173 aa12.04□□□□□ -0.48
CAPN1-212ENST00000527887 EME1Q96AY2 570 aa12.04□□□□□ -0.48
CAPN1-212ENST00000527887 HAVCR1Q96D42 359 aa12.04□□□□□ -0.48
CAPN1-212ENST00000527887 FAHD2AQ96GK7 314 aa12.04□□□□□ -0.48
CAPN1-212ENST00000527887 SAMD8Q96LT4 415 aa12.04□□□□□ -0.48
CAPN1-212ENST00000527887 SYT4Q9H2B2 425 aa12.04□□□□□ -0.48
CAPN1-212ENST00000527887 METTL17Q9H7H0 456 aaPredicted RBP12.04□□□□□ -0.48
CAPN1-212ENST00000527887 LPAR2Q9HBW0 351 aa12.04□□□□□ -0.48
CAPN1-212ENST00000527887 EMC7Q9NPA0 242 aa12.04□□□□□ -0.48
CAPN1-212ENST00000527887 G6PC2Q9NQR9 355 aa12.04□□□□□ -0.48
CAPN1-212ENST00000527887 PLEK2Q9NYT0 353 aa12.04□□□□□ -0.48
CAPN1-212ENST00000527887 PPIAL4EA0A075B759 164 aa12.03□□□□□ -0.48
CAPN1-212ENST00000527887 PPIAL4CA0A0B4J2A2 164 aa12.03□□□□□ -0.48
CAPN1-212ENST00000527887 OR6C6A6NF89 314 aa12.03□□□□□ -0.48
CAPN1-212ENST00000527887 UNC119BA6NIH7 251 aa12.03□□□□□ -0.48
CAPN1-212ENST00000527887 PPIAL4DF5H284 164 aa12.03□□□□□ -0.48
CAPN1-212ENST00000527887 ARPC3O15145 178 aa12.03□□□□□ -0.48
CAPN1-212ENST00000527887 PLPP2O43688 288 aa12.03□□□□□ -0.48
CAPN1-212ENST00000527887 CST1P01037 141 aa12.03□□□□□ -0.48
CAPN1-212ENST00000527887 FABP3P05413 133 aa12.03□□□□□ -0.48
CAPN1-212ENST00000527887 PPIAL4FP0DN26 164 aa12.03□□□□□ -0.48
CAPN1-212ENST00000527887 TNFAIP6P98066 277 aaPredicted RBP12.03□□□□□ -0.48
CAPN1-212ENST00000527887 AVPI1Q5T686 147 aa12.03□□□□□ -0.48
CAPN1-212ENST00000527887 SLC27A4Q6P1M0 643 aa12.03□□□□□ -0.48
CAPN1-212ENST00000527887 USP43Q70EL4 1123 aa12.03□□□□□ -0.48
CAPN1-212ENST00000527887 GJC3Q8NFK1 279 aa12.03□□□□□ -0.48
CAPN1-212ENST00000527887 ZNF418Q8TF45 676 aaPredicted RBP12.03□□□□□ -0.48
CAPN1-212ENST00000527887 DNAJC9Q8WXX5 260 aa12.03□□□□□ -0.48
CAPN1-212ENST00000527887 GTF3AQ92664 365 aaKnown RBP12.03□□□□□ -0.48
CAPN1-212ENST00000527887 RASD2Q96D21 266 aa12.03□□□□□ -0.48
CAPN1-212ENST00000527887 RDH12Q96NR8 316 aa12.03□□□□□ -0.48
CAPN1-212ENST00000527887 GAL3ST1Q99999 423 aa12.03□□□□□ -0.48
CAPN1-212ENST00000527887 FUZQ9BT04 418 aa12.03□□□□□ -0.48
CAPN1-212ENST00000527887 OCEL1Q9H607 264 aa12.03□□□□□ -0.48
CAPN1-212ENST00000527887 ASH2LQ9UBL3 628 aa12.03□□□□□ -0.48
CAPN1-212ENST00000527887 IL19Q9UHD0 177 aa12.03□□□□□ -0.48
CAPN1-212ENST00000527887 PURGQ9UJV8 347 aaKnown RBP12.03□□□□□ -0.48
CAPN1-212ENST00000527887 COA3Q9Y2R0 106 aaPredicted RBP12.03□□□□□ -0.48
CAPN1-212ENST00000527887 IER3IP1Q9Y5U9 82 aa12.03□□□□□ -0.48
CAPN1-212ENST00000527887 TRBV4-1A0A0J9YWV2 114 aa12.02□□□□□ -0.49
CAPN1-212ENST00000527887 IFNL4K9M1U5 179 aa12.02□□□□□ -0.49
CAPN1-212ENST00000527887 IDH3BO43837 385 aa12.02□□□□□ -0.49
CAPN1-212ENST00000527887 GADD45GO95257 159 aa12.02□□□□□ -0.49
CAPN1-212ENST00000527887 RAC2P15153 192 aa12.02□□□□□ -0.49
CAPN1-212ENST00000527887 CPT2P23786 658 aa12.02□□□□□ -0.49
CAPN1-212ENST00000527887 PEX2P28328 305 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms