RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 TLX1P31314 330 aaPredicted RBP11.25□□□□□ -0.61
TSKU-203ENST00000527881 RGS19P49795 217 aa11.25□□□□□ -0.61
TSKU-203ENST00000527881 ZNF385CQ66K41 422 aaPredicted RBP11.25□□□□□ -0.61
TSKU-203ENST00000527881 ADGRE4PQ86SQ3 457 aa11.25□□□□□ -0.61
TSKU-203ENST00000527881 ZDHHC22Q8N966 263 aa11.25□□□□□ -0.61
TSKU-203ENST00000527881 SUMF2Q8NBJ7 301 aa11.25□□□□□ -0.61
TSKU-203ENST00000527881 PARP11Q9NR21 331 aa11.25□□□□□ -0.61
TSKU-203ENST00000527881 LOC390937A0A1W2PQ73 354 aa11.25□□□□□ -0.61
TSKU-203ENST00000527881 SMCO3A2RU48 225 aa11.25□□□□□ -0.61
TSKU-203ENST00000527881 ZNF705GA8MUZ8 300 aaPredicted RBP11.25□□□□□ -0.61
TSKU-203ENST00000527881 K7EPK0 472 aa11.25□□□□□ -0.61
TSKU-203ENST00000527881 IFNA10P01566 189 aa11.25□□□□□ -0.61
TSKU-203ENST00000527881 MBP02144 154 aa11.25□□□□□ -0.61
TSKU-203ENST00000527881 PCCBP05166 539 aa11.25□□□□□ -0.61
TSKU-203ENST00000527881 SNRPCP09234 159 aaKnown RBP11.25□□□□□ -0.61
TSKU-203ENST00000527881 EMDP50402 254 aa11.25□□□□□ -0.61
TSKU-203ENST00000527881 TAF1CQ15572 869 aaPredicted RBP11.25□□□□□ -0.61
TSKU-203ENST00000527881 FAM71E2Q8N5Q1 922 aa11.25□□□□□ -0.61
TSKU-203ENST00000527881 TCTN2Q96GX1 697 aa11.25□□□□□ -0.61
TSKU-203ENST00000527881 CASD1Q96PB1 797 aa11.25□□□□□ -0.61
TSKU-203ENST00000527881 FAM212BQ9NTI7 297 aaPredicted RBP11.25□□□□□ -0.61
TSKU-203ENST00000527881 APOBEC3BQ9UH17 382 aaKnown RBP11.25□□□□□ -0.61
TSKU-203ENST00000527881 IGKV1-8A0A0C4DH67 115 aa11.25□□□□□ -0.61
TSKU-203ENST00000527881 A0A1W2PPV9 198 aa11.25□□□□□ -0.61
TSKU-203ENST00000527881 PQBP1O60828 265 aaKnown RBP11.25□□□□□ -0.61
TSKU-203ENST00000527881 AK1P00568 194 aa11.25□□□□□ -0.61
TSKU-203ENST00000527881 CD37P11049 281 aa11.25□□□□□ -0.61
TSKU-203ENST00000527881 HLA-GP17693 338 aa11.25□□□□□ -0.61
TSKU-203ENST00000527881 C5AR1P21730 350 aa11.25□□□□□ -0.61
TSKU-203ENST00000527881 FLT3LGP49771 235 aa11.25□□□□□ -0.61
TSKU-203ENST00000527881 NNATQ16517 81 aa11.25□□□□□ -0.61
TSKU-203ENST00000527881 OR2T2Q6IF00 324 aa11.25□□□□□ -0.61
TSKU-203ENST00000527881 KIRREL2Q6UWL6 708 aa11.25□□□□□ -0.61
TSKU-203ENST00000527881 TMEFF1Q8IYR6 380 aa11.25□□□□□ -0.61
TSKU-203ENST00000527881 KDM8Q8N371 416 aa11.25□□□□□ -0.61
TSKU-203ENST00000527881 KCNIP3Q9Y2W7 256 aa11.25□□□□□ -0.61
TSKU-203ENST00000527881 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.25□□□□□ -0.61
TSKU-203ENST00000527881 LSM5Q9Y4Y9 91 aaKnown RBP11.25□□□□□ -0.61
TSKU-203ENST00000527881 POMT1Q9Y6A1 747 aa11.25□□□□□ -0.61
TSKU-203ENST00000527881 A0A087WZY1 265 aa11.24□□□□□ -0.61
TSKU-203ENST00000527881 TRBV5-7A0A0A0MS05 114 aa11.24□□□□□ -0.61
TSKU-203ENST00000527881 FKTNO75072 461 aa11.24□□□□□ -0.61
TSKU-203ENST00000527881 CSTBP04080 98 aaKnown RBP11.24□□□□□ -0.61
TSKU-203ENST00000527881 ZNF888P0CJ79 500 aaPredicted RBP11.24□□□□□ -0.61
TSKU-203ENST00000527881 CHATP28329 748 aa11.24□□□□□ -0.61
TSKU-203ENST00000527881 PMELP40967 661 aa11.24□□□□□ -0.61
TSKU-203ENST00000527881 PCP4P48539 62 aa11.24□□□□□ -0.61
TSKU-203ENST00000527881 CLDN6P56747 220 aa11.24□□□□□ -0.61
TSKU-203ENST00000527881 TAS2R31P59538 309 aa11.24□□□□□ -0.61
TSKU-203ENST00000527881 KHDC3LQ587J8 217 aa11.24□□□□□ -0.61
TSKU-203ENST00000527881 ZNF343Q6P1L6 599 aa11.24□□□□□ -0.61
TSKU-203ENST00000527881 NRSN1Q8IZ57 195 aa11.24□□□□□ -0.61
TSKU-203ENST00000527881 PRSS35Q8N3Z0 413 aa11.24□□□□□ -0.61
TSKU-203ENST00000527881 SLC25A43Q8WUT9 341 aaPredicted RBP11.24□□□□□ -0.61
TSKU-203ENST00000527881 DCBLD2Q96PD2 775 aa11.24□□□□□ -0.61
TSKU-203ENST00000527881 OR5B2Q96R09 309 aa11.24□□□□□ -0.61
TSKU-203ENST00000527881 NELFAQ9H3P2 528 aa11.24□□□□□ -0.61
TSKU-203ENST00000527881 PDE7BQ9NP56 450 aa11.24□□□□□ -0.61
TSKU-203ENST00000527881 CYB5BO43169 146 aa11.24□□□□□ -0.61
TSKU-203ENST00000527881 IL2RAP01589 272 aa11.24□□□□□ -0.61
TSKU-203ENST00000527881 FCGR2CP31995 323 aa11.24□□□□□ -0.61
TSKU-203ENST00000527881 TAGLN2P37802 199 aaKnown RBP11.24□□□□□ -0.61
TSKU-203ENST00000527881 FHITP49789 147 aa11.24□□□□□ -0.61
TSKU-203ENST00000527881 MEP1BQ16820 701 aa11.24□□□□□ -0.61
TSKU-203ENST00000527881 OR51A2Q8NGJ7 313 aa11.24□□□□□ -0.61
TSKU-203ENST00000527881 OR2A1Q8NGT9 310 aa11.24□□□□□ -0.61
TSKU-203ENST00000527881 C4orf45Q96LM5 186 aa11.24□□□□□ -0.61
TSKU-203ENST00000527881 PBDC1Q9BVG4 233 aa11.24□□□□□ -0.61
TSKU-203ENST00000527881 SLC5A7Q9GZV3 580 aa11.24□□□□□ -0.61
TSKU-203ENST00000527881 GRHPRQ9UBQ7 328 aa11.24□□□□□ -0.61
TSKU-203ENST00000527881 FBXL17Q9UF56 701 aa11.24□□□□□ -0.61
TSKU-203ENST00000527881 KCNK6Q9Y257 313 aa11.24□□□□□ -0.61
TSKU-203ENST00000527881 MEMO1Q9Y316 297 aa11.24□□□□□ -0.61
TSKU-203ENST00000527881 DENND4CQ5VZ89 1909 aa11.23□□□□□ -0.61
TSKU-203ENST00000527881 C1QL1O75973 258 aa11.23□□□□□ -0.61
TSKU-203ENST00000527881 CST4P01036 141 aa11.23□□□□□ -0.61
TSKU-203ENST00000527881 SFTPCP11686 197 aa11.23□□□□□ -0.61
TSKU-203ENST00000527881 RPL12P30050 165 aaKnown RBP11.23□□□□□ -0.61
TSKU-203ENST00000527881 GNALP38405 381 aa11.23□□□□□ -0.61
TSKU-203ENST00000527881 RPS23P62266 143 aaKnown RBP11.23□□□□□ -0.61
TSKU-203ENST00000527881 LSM6P62312 80 aaKnown RBP11.23□□□□□ -0.61
TSKU-203ENST00000527881 LDLRAD1Q5T700 205 aa11.23□□□□□ -0.61
TSKU-203ENST00000527881 LINC01590Q5TEZ4 76 aa11.23□□□□□ -0.61
TSKU-203ENST00000527881 TMEM225Q6GV28 225 aa11.23□□□□□ -0.61
TSKU-203ENST00000527881 ULK3Q6PHR2 472 aa11.23□□□□□ -0.61
TSKU-203ENST00000527881 ZNF595Q8IYB9 648 aa11.23□□□□□ -0.61
TSKU-203ENST00000527881 OR4K15Q8NH41 348 aa11.23□□□□□ -0.61
TSKU-203ENST00000527881 SOX7Q9BT81 388 aa11.23□□□□□ -0.61
TSKU-203ENST00000527881 NUDT9Q9BW91 350 aa11.23□□□□□ -0.61
TSKU-203ENST00000527881 SLC17A5Q9NRA2 495 aa11.23□□□□□ -0.61
TSKU-203ENST00000527881 INSL5Q9Y5Q6 135 aa11.23□□□□□ -0.61
TSKU-203ENST00000527881 MRPS18BQ9Y676 258 aaKnown RBP11.23□□□□□ -0.61
TSKU-203ENST00000527881 OR5H15A6NDH6 313 aa11.23□□□□□ -0.61
TSKU-203ENST00000527881 OR5H1A6NKK0 313 aa11.23□□□□□ -0.61
TSKU-203ENST00000527881 GMFGO60234 142 aa11.23□□□□□ -0.61
TSKU-203ENST00000527881 SOX15O60248 233 aa11.23□□□□□ -0.61
TSKU-203ENST00000527881 GNB3P16520 340 aa11.23□□□□□ -0.61
TSKU-203ENST00000527881 SERPINA2P20848 420 aa11.23□□□□□ -0.61
TSKU-203ENST00000527881 IGFALSP35858 605 aa11.23□□□□□ -0.61
TSKU-203ENST00000527881 RAB4BP61018 213 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms