RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 TTC28Q96AY4 2481 aa13.52□□□□□ -0.24
USP47-207ENST00000527733 LIPT2A6NK58 231 aa13.52□□□□□ -0.25
USP47-207ENST00000527733 TO15178 435 aa13.52□□□□□ -0.25
USP47-207ENST00000527733 ATG12O94817 140 aa13.52□□□□□ -0.25
USP47-207ENST00000527733 CALCBP10092 127 aa13.52□□□□□ -0.25
USP47-207ENST00000527733 SELEP16581 610 aa13.52□□□□□ -0.25
USP47-207ENST00000527733 TAS2R46P59540 309 aa13.52□□□□□ -0.25
USP47-207ENST00000527733 GPR173Q9NS66 373 aa13.52□□□□□ -0.25
USP47-207ENST00000527733 PCDHB10Q9UN67 800 aa13.52□□□□□ -0.25
USP47-207ENST00000527733 TOXO94900 526 aa13.52□□□□□ -0.25
USP47-207ENST00000527733 ACP1P24666 158 aa13.52□□□□□ -0.25
USP47-207ENST00000527733 OR2M3Q8NG83 312 aa13.52□□□□□ -0.25
USP47-207ENST00000527733 LIN37Q96GY3 246 aaPredicted RBP13.52□□□□□ -0.25
USP47-207ENST00000527733 VRK1Q99986 396 aaPredicted RBP13.52□□□□□ -0.25
USP47-207ENST00000527733 JAM3Q9BX67 310 aa13.52□□□□□ -0.25
USP47-207ENST00000527733 HS3ST3B1Q9Y662 390 aa13.52□□□□□ -0.25
USP47-207ENST00000527733 ANKRD61A6NGH8 418 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 SULT1B1O43704 296 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 TK1P04183 234 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 LIMS3P0CW19 117 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 LIMS4P0CW20 117 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 IL2RGP31785 369 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 ZNF81P51508 661 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 APOOLQ6UXV4 268 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 OR4M1Q8NGD0 313 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 KISS1RQ969F8 398 aaPredicted RBP13.51□□□□□ -0.25
USP47-207ENST00000527733 ZC3H10Q96K80 434 aaKnown RBP13.51□□□□□ -0.25
USP47-207ENST00000527733 EHFQ9NZC4 300 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 UGT2A1Q9Y4X1 527 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 HMGB3O15347 200 aaKnown RBP13.51□□□□□ -0.25
USP47-207ENST00000527733 LIPCP11150 499 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 PTGS2P35354 604 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 SOX8P57073 446 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 ZNF121P58317 390 aaPredicted RBP13.51□□□□□ -0.25
USP47-207ENST00000527733 GRK1Q15835 563 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 ACTBL2Q562R1 376 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 ELMOD2Q8IZ81 293 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 DNAAF1Q8NEP3 725 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 AKR7LQ8NHP1 331 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 FAIMQ9NVQ4 179 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 NTMQ9P121 344 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 FBXL2Q9UKC9 423 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 CNOT4O95628 575 aaKnown RBP13.51□□□□□ -0.25
USP47-207ENST00000527733 IGLV3-21P80748 117 aaPredicted RBP13.51□□□□□ -0.25
USP47-207ENST00000527733 FGL1Q08830 312 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 DYNC2LI1Q8TCX1 351 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 FGF11Q92914 225 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 ZNF700Q9H0M5 742 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 CCDC86Q9H6F5 360 aaKnown RBP13.51□□□□□ -0.25
USP47-207ENST00000527733 NOX3Q9HBY0 568 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 IGHV1-45A0A0A0MS14 117 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 OIP5O43482 229 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 TSPAN2O60636 221 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 PMPCAQ10713 525 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 PPA1Q15181 289 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 ARTNQ5T4W7 220 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 DEGS2Q6QHC5 323 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 OR6X1Q8NH79 312 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 MCHR2Q969V1 340 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 CITED4Q96RK1 184 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 KCNJ15Q99712 375 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 LRP12Q9Y561 859 aa13.51□□□□□ -0.25
USP47-207ENST00000527733 TRABD2BA6NFA1 517 aa13.5□□□□□ -0.25
USP47-207ENST00000527733 HYAL3O43820 417 aaPredicted RBP13.5□□□□□ -0.25
USP47-207ENST00000527733 SLC22A5O76082 557 aa13.5□□□□□ -0.25
USP47-207ENST00000527733 NTN1O95631 604 aa13.5□□□□□ -0.25
USP47-207ENST00000527733 LIFP15018 202 aa13.5□□□□□ -0.25
USP47-207ENST00000527733 CTLA4P16410 223 aa13.5□□□□□ -0.25
USP47-207ENST00000527733 ARF1P84077 181 aaKnown RBP13.5□□□□□ -0.25
USP47-207ENST00000527733 FUT5Q11128 374 aa13.5□□□□□ -0.25
USP47-207ENST00000527733 TNK1Q13470 666 aa13.5□□□□□ -0.25
USP47-207ENST00000527733 OR8H3Q8N146 312 aa13.5□□□□□ -0.25
USP47-207ENST00000527733 NICN1Q9BSH3 213 aa13.5□□□□□ -0.25
USP47-207ENST00000527733 RTL8AQ9BWD3 113 aa13.5□□□□□ -0.25
USP47-207ENST00000527733 CEBPEQ15744 281 aa13.5□□□□□ -0.25
USP47-207ENST00000527733 AKIRIN2Q53H80 203 aa13.5□□□□□ -0.25
USP47-207ENST00000527733 OR5AS1Q8N127 324 aa13.5□□□□□ -0.25
USP47-207ENST00000527733 FAM109AQ8N4B1 249 aa13.5□□□□□ -0.25
USP47-207ENST00000527733 OR4K15Q8NH41 348 aa13.5□□□□□ -0.25
USP47-207ENST00000527733 CHPT1Q8WUD6 406 aa13.5□□□□□ -0.25
USP47-207ENST00000527733 SPSB2Q99619 263 aa13.5□□□□□ -0.25
USP47-207ENST00000527733 PSD2Q9BQI7 771 aa13.5□□□□□ -0.25
USP47-207ENST00000527733 ARHGEF17Q96PE2 2063 aaPredicted RBP13.5□□□□□ -0.25
USP47-207ENST00000527733 AIPO00170 330 aa13.5□□□□□ -0.25
USP47-207ENST00000527733 BHLHE40O14503 412 aa13.5□□□□□ -0.25
USP47-207ENST00000527733 GCM2O75603 506 aaPredicted RBP13.5□□□□□ -0.25
USP47-207ENST00000527733 SERPINE2P07093 398 aa13.5□□□□□ -0.25
USP47-207ENST00000527733 SYT9Q86SS6 491 aa13.5□□□□□ -0.25
USP47-207ENST00000527733 SULF2Q8IWU5 870 aa13.5□□□□□ -0.25
USP47-207ENST00000527733 GCNT2Q8N0V5 402 aa13.5□□□□□ -0.25
USP47-207ENST00000527733 GCDHQ92947 438 aaPredicted RBP13.5□□□□□ -0.25
USP47-207ENST00000527733 PPA2Q9H2U2 334 aa13.5□□□□□ -0.25
USP47-207ENST00000527733 EXOGQ9Y2C4 368 aaKnown RBP13.5□□□□□ -0.25
USP47-207ENST00000527733 PTBP1P26599 531 aaKnown RBP eCLIP13.49□□□□□ -0.255e-7■■■■■ 32.2
USP47-207ENST00000527733 AGTR1P30556 359 aa13.49□□□□□ -0.25
USP47-207ENST00000527733 RAB1AP62820 205 aa13.49□□□□□ -0.25
USP47-207ENST00000527733 CYCSP99999 105 aaKnown RBP13.49□□□□□ -0.25
USP47-207ENST00000527733 OR1F12Q8NHA8 337 aa13.49□□□□□ -0.25
USP47-207ENST00000527733 PELI1Q96FA3 418 aa13.49□□□□□ -0.25
USP47-207ENST00000527733 REEP6Q96HR9 211 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms