RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 TTC29Q8NA56 475 aaPredicted RBP2.87□□□□□ -1.95
CD44-219ENST00000525685 FAM71CQ8NEG0 241 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 RHEBL1Q8TAI7 183 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 FAM81AQ8TBF8 368 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 FNDC8Q8TC99 324 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 CT55Q8WUE5 264 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 SLC5A11Q8WWX8 675 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 C11orf24Q96F05 449 aaPredicted RBP2.87□□□□□ -1.95
CD44-219ENST00000525685 C14orf79Q96F83 325 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 ZNF285Q96NJ3 590 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 SELENOSQ9BQE4 189 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 DPH7Q9BTV6 452 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 PARD6BQ9BYG5 372 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 DEFB126Q9BYW3 111 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 ULBP3Q9BZM4 244 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 PCBD2Q9H0N5 130 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 OPN3Q9H1Y3 402 aaPredicted RBP2.87□□□□□ -1.95
CD44-219ENST00000525685 LHX9Q9NQ69 397 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 PRR34Q9NV39 138 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 FKBP14Q9NWM8 211 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 MBD2Q9UBB5 411 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 DHCR7Q9UBM7 475 aaKnown RBP2.87□□□□□ -1.95
CD44-219ENST00000525685 ATP6V1HQ9UI12 483 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 SLC22A14Q9Y267 594 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 PLEKHA6Q9Y2H5 1048 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 ACOT9Q9Y305 439 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 CAB39Q9Y376 341 aaPredicted RBP2.87□□□□□ -1.95
CD44-219ENST00000525685 TMED5Q9Y3A6 229 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 CFAP54Q96N23 3096 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 SNRNP200O75643 2136 aaKnown RBP2.87□□□□□ -1.95
CD44-219ENST00000525685 RIF1Q5UIP0 2472 aaKnown RBP2.86□□□□□ -1.95
CD44-219ENST00000525685 PIEZO1Q92508 2521 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 PTPRZ1P23471 2315 aaPredicted RBP2.86□□□□□ -1.95
CD44-219ENST00000525685 FAM230AA0A1W2PPH8 454 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 SYCE1LA8MT33 242 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 A8MT66 165 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 H0YGG7 62 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 GOLGA8RI6L899 631 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 SGK494L7N484 410 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 IMPA2O14732 288 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 CDH16O75309 829 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 STK16O75716 305 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 LY6G6DO95868 133 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 CAPN1P07384 714 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 RPS17P08708 135 aaKnown RBP2.86□□□□□ -1.95
CD44-219ENST00000525685 SNRPAP09012 282 aaKnown RBP2.86□□□□□ -1.95
CD44-219ENST00000525685 HBQ1P09105 142 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 GFAPP14136 432 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 IDO1P14902 403 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 UQCRBP14927 111 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 PAICSP22234 425 aaKnown RBP2.86□□□□□ -1.95
CD44-219ENST00000525685 F8A1P23610 371 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 PTBP1P26599 531 aaKnown RBP eCLIP2.86□□□□□ -1.95
CD44-219ENST00000525685 SOX6P35712 828 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 DLSTP36957 453 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 ALDH3B2P48448 385 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 HNMTP50135 292 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 CCR8P51685 355 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 VSX2P58304 361 aaPredicted RBP2.86□□□□□ -1.95
CD44-219ENST00000525685 B2MP61769 119 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 RPS15AP62244 130 aaKnown RBP2.86□□□□□ -1.95
CD44-219ENST00000525685 CSNK1G2P78368 415 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 CDC20Q12834 499 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 CEBPEQ15744 281 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 STK11Q15831 433 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 PDK4Q16654 411 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 ZSWIM7Q19AV6 140 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 FAM83EQ2M2I3 478 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 GLYR1Q49A26 553 aaPredicted RBP2.86□□□□□ -1.95
CD44-219ENST00000525685 CYBRD1Q53TN4 286 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 PAN3Q58A45 887 aaKnown RBP2.86□□□□□ -1.95
CD44-219ENST00000525685 CDKL4Q5MAI5 379 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 THOC7Q6I9Y2 204 aaKnown RBP2.86□□□□□ -1.95
CD44-219ENST00000525685 SULT1C3Q6IMI6 304 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 ADNP2Q6IQ32 1131 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 CGB2Q6NT52 195 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 LEG1Q6P5S2 330 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 FAM199XQ6PEV8 388 aaPredicted RBP2.86□□□□□ -1.95
CD44-219ENST00000525685 PAMR1Q6UXH9 720 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 ISLR2Q6UXK2 745 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 HACD2Q6Y1H2 254 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 TIFABQ6ZNK6 161 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 COX15Q7KZN9 410 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 C4orf33Q8N1A6 199 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 CSNK1A1LQ8N752 337 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 SNX31Q8N9S9 440 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 MFSD9Q8NBP5 474 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 ZNF740Q8NDX6 193 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 STAG3L4Q8TBR4 150 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 STARD8Q92502 1023 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 NEIL2Q969S2 332 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 TM4SF19Q96DZ7 209 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 DTNBP1Q96EV8 351 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 SDSLQ96GA7 329 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 MAGEB18Q96M61 343 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 TSNARE1Q96NA8 513 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 PRAP1Q96NZ9 151 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 CATSPER2Q96P56 530 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 ZIM3Q96PE6 472 aa2.86□□□□□ -1.95
CD44-219ENST00000525685 OR2A5Q96R48 311 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms