RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 ZP4Q12836 540 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 PMS2P3Q13401 168 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 TSTQ16762 297 aaKnown RBP4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 GTDC1Q4AE62 458 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 ALG10Q5BKT4 473 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 MTX3Q5HYI7 312 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 ALG10BQ5I7T1 473 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 C6orf10Q5SRN2 563 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 FAM69AQ5T7M9 428 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 DCAF12L2Q5VW00 463 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 ACSM5Q6NUN0 579 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 TMEM154Q6P9G4 183 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 RBMS3Q6XE24 437 aaKnown RBP4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 H1FNTQ75WM6 255 aaPredicted RBP4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 ANKRD13BQ86YJ7 626 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 C20orf196Q8IYI0 205 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 TMEM123Q8N131 208 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 TEX29Q8N6K0 151 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 OR4M2Q8NGB6 313 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 NANPQ8TBE9 248 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 GTF3AQ92664 365 aaKnown RBP4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 SLC38A4Q969I6 547 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 MAL2Q969L2 176 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 TXNDC15Q96J42 360 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 TSPAN32Q96QS1 320 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 SORT1Q99523 831 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 PAIP2Q9BPZ3 127 aaKnown RBP4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 FUZQ9BT04 418 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 C1QTNF5Q9BXJ0 243 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 ULBP2Q9BZM5 246 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 C20orf27Q9GZN8 174 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 RACGAP1Q9H0H5 632 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 WDR55Q9H6Y2 383 aaPredicted RBP4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 RNF121Q9H920 327 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 TPT1P8Q9HAU6 139 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 ESM1Q9NQ30 184 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 SLC52A3Q9NQ40 469 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 HINT3Q9NQE9 182 aaKnown RBP4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 DECR2Q9NUI1 292 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 DDX28Q9NUL7 540 aaKnown RBP4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 AIG1Q9NVV5 245 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 B3GNT2Q9NY97 397 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 UBAP1Q9NZ09 502 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 SELENONQ9NZV5 590 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 LGALS13Q9UHV8 139 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 ZNF346Q9UL40 294 aaKnown RBP4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 IFT52Q9Y366 437 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 DYSFO75923 2080 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 DSPPQ9NZW4 1301 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 MEGF8Q7Z7M0 2845 aa4.45□□□□□ -1.7
CTNNA1-239ENST00000523685 IGKV1D-42A0A075B6H8 117 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 A0A087WUJ7 227 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 IGHV1-69-2A0A0G2JMI3 117 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 A0A0G2JPF8 293 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 HNRNPCL2B2RXH8 293 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 HNRNPCL3B7ZW38 293 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 LRRN3E7EW58 273 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 C11orf98E9PRG8 122 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 MS4A18H0YCH9 400 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 TSPAN4O14817 238 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 OR2T1O43869 369 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 TYROBPO43914 113 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 HNRNPCL1O60812 293 aaKnown RBP4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 RP2O75695 350 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 UBL3O95164 117 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 HNRNPCL4P0DMR1 293 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 CCNOP22674 350 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 HTR2AP28223 471 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 CSNK1A1P48729 337 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 BIDP55957 195 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 KLF3P57682 345 aaPredicted RBP4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 ERVS71-1P61550 626 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 NCALDP61601 193 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 UBA52P62987 128 aaKnown RBP4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 LCN2P80188 198 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 SSBP2P81877 361 aaPredicted RBP4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 RBBP4Q09028 425 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 LRRC74AQ0VAA2 488 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 HNRNPA0Q13151 305 aaKnown RBP4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 STX3Q13277 289 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 MS4A18Q3C1V0 323 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 CEP85LQ5SZL2 805 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 MORN5Q5VZ52 161 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 ZNF626Q68DY1 528 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 USP43Q70EL4 1123 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 C1QL2Q7Z5L3 287 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 SNX32Q86XE0 403 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 WDFY1Q8IWB7 410 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 SKA3Q8IX90 412 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 SIGLECL1Q8N7X8 197 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 ZDHHC22Q8N966 263 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 PCYOX1LQ8NBM8 494 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 SLC30A7Q8NEW0 376 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 FGFBP3Q8TAT2 258 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 SYNPRQ8TBG9 265 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 RAB40AQ8WXH6 277 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 CCL17Q92583 94 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 TAF15Q92804 592 aaKnown RBP eCLIP4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 VPS33AQ96AX1 596 aa4.44□□□□□ -1.7
CTNNA1-239ENST00000523685 RAB39BQ96DA2 213 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms