RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 ADAP1O75689 374 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 SCELO95171 688 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 VAPBO95292 243 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 IGHV4-39P01824 125 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 GPIP06744 558 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 CD63P08962 238 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 HBQ1P09105 142 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 GNAO1P09471 354 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 OCMP0CE72 109 aaPredicted RBP4.44□□□□□ -1.7
PABPC1-223ENST00000523636 RD3LP0DJH9 198 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 PPIAL4FP0DN26 164 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 UQCRBP14927 111 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 ETS2P15036 469 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 ZNF7P17097 686 aaPredicted RBP4.44□□□□□ -1.7
PABPC1-223ENST00000523636 MSH3P20585 1137 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 STOMP27105 288 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 LAP3P28838 519 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 CEACAM3P40198 252 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 GPR1P46091 355 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 MMP15P51511 669 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 NUDT6P53370 316 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 VSX2P58304 361 aaPredicted RBP4.44□□□□□ -1.7
PABPC1-223ENST00000523636 MLF1P58340 268 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 RHOAP61586 193 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 CRADDP78560 199 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 ADARB1P78563 741 aaKnown RBP4.44□□□□□ -1.7
PABPC1-223ENST00000523636 PSG6Q00889 435 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 C5orf64Q2M2E5 130 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 C5orf47Q569G3 176 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 XKR6Q5GH73 641 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 TSTD2Q5T7W7 516 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 MARC1Q5VT66 337 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 H3F3CQ6NXT2 135 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 CD164L2Q6UWJ8 174 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 ZCCHC23Q6ZST2 131 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 RNF130Q86XS8 419 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 MED12LQ86YW9 2145 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 TGIF2LXQ8IUE1 241 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 KLHDC8BQ8IXV7 354 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 DEFB107AQ8IZN7 70 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 NATD1Q8N6N6 113 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 OR4C15Q8NGM1 316 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 OR9G4Q8NGQ1 327 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 VANGL1Q8TAA9 524 aaPredicted RBP4.44□□□□□ -1.7
PABPC1-223ENST00000523636 NUDCD2Q8WVJ2 157 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 ZNF641Q96N77 438 aaPredicted RBP4.44□□□□□ -1.7
PABPC1-223ENST00000523636 SORT1Q99523 831 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 EBF4Q9BQW3 602 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 PAPOLGQ9BWT3 736 aaKnown RBP4.44□□□□□ -1.7
PABPC1-223ENST00000523636 GATA5Q9BWX5 397 aaPredicted RBP4.44□□□□□ -1.7
PABPC1-223ENST00000523636 C20orf27Q9GZN8 174 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 SRRQ9GZT4 340 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 SLC25A51Q9H1U9 297 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 GID8Q9NWU2 228 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 HRASLS2Q9NWW9 162 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 P2RX2Q9UBL9 471 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 B4GALT7Q9UBV7 327 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 PSORS1C1Q9UIG5 152 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 POMT2Q9UKY4 750 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 DHDHQ9UQ10 334 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 PPIAL4AQ9Y536 164 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 URGCP-MRPS24S4R325 110 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 FAT2Q9NYQ8 4349 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 VPS13DQ5THJ4 4388 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 NSG1A0A0A6YYJ2 146 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 SMIM31A0A1B0GVY4 71 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 ZNF99A8MXY4 864 aaPredicted RBP4.43□□□□□ -1.7
PABPC1-223ENST00000523636 PRSS46E5RG02 174 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 FAM72CH0Y354 149 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 RNASEK-C17orf49H0YIS7 233 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 UBFD1O14562 309 aaKnown RBP4.43□□□□□ -1.7
PABPC1-223ENST00000523636 ZNF195O14628 629 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 MGST3O14880 152 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 SH3BGRLO75368 114 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 JTBO76095 146 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 CLDN7O95471 211 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 CST4P01036 141 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 EPOP01588 193 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 RPN2P04844 631 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 SFTPBP07988 381 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 ALDOCP09972 364 aaKnown RBP4.43□□□□□ -1.7
PABPC1-223ENST00000523636 SLC35E2BP0CK96 405 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 SLC35E2P0CK97 266 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 ZNF37AP17032 561 aaPredicted RBP4.43□□□□□ -1.7
PABPC1-223ENST00000523636 HOXB9P17482 250 aaPredicted RBP4.43□□□□□ -1.7
PABPC1-223ENST00000523636 MATN1P21941 496 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 ARRB2P32121 409 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 UGT2B10P36537 528 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 NSG1P42857 185 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 SLC1A2P43004 574 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 GPR12P47775 334 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 SLC6A8P48029 635 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 ALDH3B2P48448 385 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 MRPL19P49406 292 aaKnown RBP4.43□□□□□ -1.7
PABPC1-223ENST00000523636 ZNF136P52737 540 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 PSMD4P55036 377 aaKnown RBP4.43□□□□□ -1.7
PABPC1-223ENST00000523636 RAB4BP61018 213 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 ATP6V0D1P61421 351 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 CFHR3Q02985 330 aa4.43□□□□□ -1.7
PABPC1-223ENST00000523636 RAD51Q06609 339 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms