RNA–Protein interactions for RNA: ENST00000522855.5

SKP1-210, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SKP1, Length 802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-210ENST00000522855 HPS6Q86YV9 775 aa3.28□□□□□ -1.88
SKP1-210ENST00000522855 TBC1D21Q8IYX1 336 aa3.28□□□□□ -1.88
SKP1-210ENST00000522855 DEFB123Q8N688 67 aa3.28□□□□□ -1.88
SKP1-210ENST00000522855 ASCC1Q8N9N2 400 aaKnown RBP3.28□□□□□ -1.88
SKP1-210ENST00000522855 KLHL30-AS1Q8NEE0 82 aa3.28□□□□□ -1.88
SKP1-210ENST00000522855 OR13C4Q8NGS5 318 aa3.28□□□□□ -1.88
SKP1-210ENST00000522855 RAB2BQ8WUD1 216 aa3.28□□□□□ -1.88
SKP1-210ENST00000522855 DCAKDQ8WVC6 231 aa3.28□□□□□ -1.88
SKP1-210ENST00000522855 OR8D1Q8WZ84 308 aa3.28□□□□□ -1.88
SKP1-210ENST00000522855 ISG20Q96AZ6 181 aaKnown RBP3.28□□□□□ -1.88
SKP1-210ENST00000522855 C12orf43Q96C57 262 aaKnown RBP3.28□□□□□ -1.88
SKP1-210ENST00000522855 CMTM5Q96DZ9 223 aa3.28□□□□□ -1.88
SKP1-210ENST00000522855 SMIM14Q96QK8 99 aa3.28□□□□□ -1.88
SKP1-210ENST00000522855 TRIB3Q96RU7 358 aa3.28□□□□□ -1.88
SKP1-210ENST00000522855 CYTH2Q99418 400 aa3.28□□□□□ -1.88
SKP1-210ENST00000522855 KIFC1Q9BW19 673 aa3.28□□□□□ -1.88
SKP1-210ENST00000522855 TSSK1BQ9BXA7 367 aa3.28□□□□□ -1.88
SKP1-210ENST00000522855 TRABDQ9H4I3 376 aa3.28□□□□□ -1.88
SKP1-210ENST00000522855 RPF2Q9H7B2 306 aaKnown RBP3.28□□□□□ -1.88
SKP1-210ENST00000522855 UGT1A7Q9HAW7 530 aa3.28□□□□□ -1.88
SKP1-210ENST00000522855 UGT1A10Q9HAW8 530 aa3.28□□□□□ -1.88
SKP1-210ENST00000522855 UGT1A8Q9HAW9 530 aa3.28□□□□□ -1.88
SKP1-210ENST00000522855 FANCEQ9HB96 536 aa3.28□□□□□ -1.88
SKP1-210ENST00000522855 MRM3Q9HC36 420 aaKnown RBP3.28□□□□□ -1.88
SKP1-210ENST00000522855 HMG20AQ9NP66 347 aa3.28□□□□□ -1.88
SKP1-210ENST00000522855 FBXO8Q9NRD0 319 aa3.28□□□□□ -1.88
SKP1-210ENST00000522855 PNO1Q9NRX1 252 aaKnown RBP3.28□□□□□ -1.88
SKP1-210ENST00000522855 TREX1Q9NSU2 369 aa3.28□□□□□ -1.88
SKP1-210ENST00000522855 C20orf96Q9NUD7 363 aaPredicted RBP3.28□□□□□ -1.88
SKP1-210ENST00000522855 DCAF16Q9NXF7 216 aa3.28□□□□□ -1.88
SKP1-210ENST00000522855 ENPP5Q9UJA9 477 aa3.28□□□□□ -1.88
SKP1-210ENST00000522855 ARL5AQ9Y689 179 aa3.28□□□□□ -1.88
SKP1-210ENST00000522855 PTPRBP23467 1997 aa3.28□□□□□ -1.88
SKP1-210ENST00000522855 MED13Q9UHV7 2174 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 GVINP1Q7Z2Y8 2422 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 ARPC4-TTLL3A0A0A6YYG9 625 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 A0A0J9YYE9 177 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 A0A0U1RQS6 177 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 C1orf232A0A0U1RR37 186 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 CXorf51AA0A1B0GTR3 108 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 OR51F1A6NGY5 319 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 SAGE2PA6NJ88 616 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 ZSCAN5BA6NJL1 495 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 FAM220BPB1ANY3 271 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 TRIM49D1C9J1S8 452 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 PPIAL4DF5H284 164 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 H3BMQ9 156 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 KPNA3O00505 521 aaPredicted RBP3.27□□□□□ -1.89
SKP1-210ENST00000522855 STX7O15400 261 aaKnown RBP3.27□□□□□ -1.89
SKP1-210ENST00000522855 ZW10O43264 779 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 KLHL41O60662 606 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 TBX19O60806 448 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 SNNO75324 88 aaPredicted RBP3.27□□□□□ -1.89
SKP1-210ENST00000522855 CLPXO76031 633 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 CDK14O94921 469 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 DUSP14O95147 198 aaKnown RBP3.27□□□□□ -1.89
SKP1-210ENST00000522855 VAPBO95292 243 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 PTTG1O95997 202 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 TRBC1P01850 177 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 THY1P04216 161 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 PTBP1P26599 531 aaKnown RBP eCLIP3.27□□□□□ -1.89
SKP1-210ENST00000522855 CD40LGP29965 261 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 TALDO1P37837 337 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 SLC1A2P43004 574 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 MAGEA5P43359 124 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 CSNK1DP48730 415 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 SERPINB9P50453 376 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 ETV1P50549 477 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 NOVA1P51513 510 aaKnown RBP3.27□□□□□ -1.89
SKP1-210ENST00000522855 BLVRAP53004 296 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 RPL8P62917 257 aaKnown RBP3.27□□□□□ -1.89
SKP1-210ENST00000522855 CXCL6P80162 114 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 SEMG2Q02383 582 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 CSTF1Q05048 431 aaKnown RBP3.27□□□□□ -1.89
SKP1-210ENST00000522855 NAB1Q13506 487 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 ELAVL3Q14576 367 aaKnown RBP3.27□□□□□ -1.89
SKP1-210ENST00000522855 TAF1AQ15573 450 aaPredicted RBP3.27□□□□□ -1.89
SKP1-210ENST00000522855 CHI3L2Q15782 390 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 GSG1Q2KHT4 349 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 HNRNPA1L2Q32P51 320 aaKnown RBP3.27□□□□□ -1.89
SKP1-210ENST00000522855 GLYR1Q49A26 553 aaPredicted RBP3.27□□□□□ -1.89
SKP1-210ENST00000522855 CCDC58Q4VC31 144 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 CARD16Q5EG05 197 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 NCR3LG1Q68D85 454 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 PDPK2PQ6A1A2 396 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 PVRIGQ6DKI7 326 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 ANKRD26P1Q6NSI1 321 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 PLEKHG7Q6ZR37 379 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 AKAP14Q86UN6 197 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 SLC26A11Q86WA9 606 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 CLVS1Q8IUQ0 354 aaPredicted RBP3.27□□□□□ -1.89
SKP1-210ENST00000522855 SLC38A6Q8IZM9 456 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 STK40Q8N2I9 435 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 NATD1Q8N6N6 113 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 CSNK1A1LQ8N752 337 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 TRIML2Q8N7C3 387 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 SNX31Q8N9S9 440 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 OR4K2Q8NGD2 314 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 OR2A12Q8NGT7 310 aa3.27□□□□□ -1.89
SKP1-210ENST00000522855 BRSK1Q8TDC3 778 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms