RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 ZNF14P17017 642 aaPredicted RBP5.53□□□□□ -1.52
SDCBP-210ENST00000522843 ATP6V1C1P21283 382 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 CD80P33681 288 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 ARR3P36575 388 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 APOBEC1P41238 236 aaKnown RBP5.53□□□□□ -1.52
SDCBP-210ENST00000522843 RAD52P43351 418 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 MTNR1AP48039 350 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 CCT3P49368 545 aaKnown RBP5.53□□□□□ -1.52
SDCBP-210ENST00000522843 SLC35A1P78382 337 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 ROR2Q01974 943 aaKnown RBP5.53□□□□□ -1.52
SDCBP-210ENST00000522843 PAX2Q02962 417 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 PAX8Q06710 450 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 ZNF141Q15928 474 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 SPRNQ5BIV9 151 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 PGBD2Q6P3X8 592 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 PIWIL3Q7Z3Z3 882 aaKnown RBP5.53□□□□□ -1.52
SDCBP-210ENST00000522843 C6orf120Q7Z4R8 191 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 ADGRG5Q8IZF4 528 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 C10orf111Q8N326 155 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 PARP8Q8N3A8 854 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 C11orf65Q8NCR3 313 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 SLC26A7Q8TE54 656 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 CANT1Q8WVQ1 401 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 CCDC124Q96CT7 223 aaKnown RBP5.53□□□□□ -1.52
SDCBP-210ENST00000522843 NSMCE2Q96MF7 247 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 SDF2Q99470 211 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 GAL3ST1Q99999 423 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 AIFM2Q9BRQ8 373 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 SLC35A5Q9BS91 424 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 A4GALTQ9NPC4 353 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 C8orf4Q9NR00 106 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 DCAF16Q9NXF7 216 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 SEC14L4Q9UDX3 406 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 CSMD3Q7Z407 3707 aa5.53□□□□□ -1.52
SDCBP-210ENST00000522843 PLECQ15149 4684 aaKnown RBP5.53□□□□□ -1.52
SDCBP-210ENST00000522843 DOCK11Q5JSL3 2073 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 DSPPQ9NZW4 1301 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 TET2Q6N021 2002 aaPredicted RBP5.52□□□□□ -1.53
SDCBP-210ENST00000522843 DHRS12A0PJE2 317 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 LIPT2A6NK58 231 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 AQP7P3A6NL99 342 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 CLDN25C9JDP6 229 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 RPL36A-HNRNPH2H7BZ11 118 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 AP3D1O14617 1153 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 EIF1BO60739 113 aaKnown RBP5.52□□□□□ -1.53
SDCBP-210ENST00000522843 FOXH1O75593 365 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 ZNF432O94892 652 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 AGR2O95994 175 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 IFNA14P01570 189 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 SEMG1P04279 462 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 CSF1P09603 554 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 ETS2P15036 469 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 ATP6V1B2P21281 511 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 RYKP34925 604 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 MAGEA2P43356 314 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 PTDSS1P48651 473 aaKnown RBP5.52□□□□□ -1.53
SDCBP-210ENST00000522843 CLK1P49759 484 aaKnown RBP5.52□□□□□ -1.53
SDCBP-210ENST00000522843 ANXA11P50995 505 aaKnown RBP5.52□□□□□ -1.53
SDCBP-210ENST00000522843 SELENOWP63302 87 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 GK3PQ14409 553 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 RCN1Q15293 331 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 MAPK11Q15759 364 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 C2orf68Q2NKX9 166 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 TMEM255AQ5JRV8 349 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 PHYHD1Q5SRE7 291 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 INTS11Q5TA45 600 aaKnown RBP5.52□□□□□ -1.53
SDCBP-210ENST00000522843 OGFRL1Q5TC84 451 aaPredicted RBP5.52□□□□□ -1.53
SDCBP-210ENST00000522843 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.52□□□□□ -1.53
SDCBP-210ENST00000522843 NIPAL3Q6P499 406 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 BRD3OSQ6XYD6 125 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 CREB3L2Q70SY1 520 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 EIF3MQ7L2H7 374 aaKnown RBP5.52□□□□□ -1.53
SDCBP-210ENST00000522843 GRINAQ7Z429 371 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 ABHD12BQ7Z5M8 362 aaPredicted RBP5.52□□□□□ -1.53
SDCBP-210ENST00000522843 SPATA24Q86W54 205 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 ANKFN1Q8N957 763 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 Q8N9P0 234 aaPredicted RBP5.52□□□□□ -1.53
SDCBP-210ENST00000522843 IL17RDQ8NFM7 739 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 OR52E2Q8NGJ4 325 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 OR5D16Q8NGK9 328 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 IPCEF1Q8WWN9 437 aaPredicted RBP5.52□□□□□ -1.53
SDCBP-210ENST00000522843 PYDC1Q8WXC3 89 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 TMEM234Q8WY98 164 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 CENPNQ96H22 339 aaPredicted RBP5.52□□□□□ -1.53
SDCBP-210ENST00000522843 PYURFQ96I23 114 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 NAA11Q9BSU3 229 aaPredicted RBP5.52□□□□□ -1.53
SDCBP-210ENST00000522843 SF3B5Q9BWJ5 86 aaKnown RBP5.52□□□□□ -1.53
SDCBP-210ENST00000522843 OSBPL10Q9BXB5 764 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 LINC00470Q9BZP3 86 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 YY1AP1Q9H869 796 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 GPR35Q9HC97 309 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 MOV10Q9HCE1 1003 aaKnown RBP5.52□□□□□ -1.53
SDCBP-210ENST00000522843 IL1RAPQ9NPH3 570 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 HINT3Q9NQE9 182 aaKnown RBP5.52□□□□□ -1.53
SDCBP-210ENST00000522843 ZCCHC3Q9NUD5 404 aaKnown RBP5.52□□□□□ -1.53
SDCBP-210ENST00000522843 NECAP2Q9NVZ3 263 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 UBAP1Q9NZ09 502 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 ZNF224Q9NZL3 707 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 TAAR3PQ9P1P4 343 aa5.52□□□□□ -1.53
SDCBP-210ENST00000522843 RIMS3Q9UJD0 308 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms