RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 SIGLEC7Q9Y286 467 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 OTOFQ9HC10 1997 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 RNF212BA8MTL3 300 aa12.53□□□□□ -0.4
SYNPO-205ENST00000522122 ICOSLGO75144 302 aa12.53□□□□□ -0.4
SYNPO-205ENST00000522122 ALOX5APP20292 161 aa12.53□□□□□ -0.4
SYNPO-205ENST00000522122 MSR1P21757 451 aa12.53□□□□□ -0.4
SYNPO-205ENST00000522122 TLE4Q04727 773 aa12.53□□□□□ -0.4
SYNPO-205ENST00000522122 ZNF74Q16587 644 aa12.53□□□□□ -0.4
SYNPO-205ENST00000522122 H3F3CQ6NXT2 135 aa12.53□□□□□ -0.4
SYNPO-205ENST00000522122 LILRA6Q6PI73 481 aa12.53□□□□□ -0.4
SYNPO-205ENST00000522122 CNEP1R1Q8N9A8 125 aa12.53□□□□□ -0.4
SYNPO-205ENST00000522122 FAM181AQ8N9Y4 354 aa12.53□□□□□ -0.4
SYNPO-205ENST00000522122 EDAQ92838 391 aa12.53□□□□□ -0.4
SYNPO-205ENST00000522122 LRRC46Q96FV0 321 aa12.53□□□□□ -0.4
SYNPO-205ENST00000522122 JAM3Q9BX67 310 aa12.53□□□□□ -0.4
SYNPO-205ENST00000522122 NECAP2Q9NVZ3 263 aa12.53□□□□□ -0.4
SYNPO-205ENST00000522122 LEUTXA8MZ59 168 aa12.53□□□□□ -0.4
SYNPO-205ENST00000522122 MRPS34P82930 218 aaKnown RBP12.53□□□□□ -0.4
SYNPO-205ENST00000522122 IL10RAQ13651 578 aa12.53□□□□□ -0.4
SYNPO-205ENST00000522122 PHLDA2Q53GA4 152 aa12.53□□□□□ -0.4
SYNPO-205ENST00000522122 AVPI1Q5T686 147 aa12.53□□□□□ -0.4
SYNPO-205ENST00000522122 BPHLQ86WA6 291 aaPredicted RBP12.53□□□□□ -0.4
SYNPO-205ENST00000522122 MAML2Q8IZL2 1156 aaPredicted RBP12.53□□□□□ -0.4
SYNPO-205ENST00000522122 MVB12AQ96EY5 273 aa12.53□□□□□ -0.4
SYNPO-205ENST00000522122 PTDSS2Q9BVG9 487 aa12.53□□□□□ -0.4
SYNPO-205ENST00000522122 PLSCR5A0PG75 271 aa12.53□□□□□ -0.4
SYNPO-205ENST00000522122 OR6C6A6NF89 314 aa12.53□□□□□ -0.4
SYNPO-205ENST00000522122 VAMP5O95183 116 aa12.53□□□□□ -0.4
SYNPO-205ENST00000522122 SFRP5Q5T4F7 317 aa12.53□□□□□ -0.4
SYNPO-205ENST00000522122 DCAF12Q5T6F0 453 aa12.53□□□□□ -0.4
SYNPO-205ENST00000522122 RPS19BP1Q86WX3 136 aaKnown RBP12.53□□□□□ -0.4
SYNPO-205ENST00000522122 STT3BQ8TCJ2 826 aa12.53□□□□□ -0.4
SYNPO-205ENST00000522122 YIPF5Q969M3 257 aa12.53□□□□□ -0.4
SYNPO-205ENST00000522122 SEH1LQ96EE3 360 aa12.53□□□□□ -0.4
SYNPO-205ENST00000522122 NKX3-1Q99801 234 aaPredicted RBP12.53□□□□□ -0.4
SYNPO-205ENST00000522122 WWTR1Q9GZV5 400 aa12.53□□□□□ -0.4
SYNPO-205ENST00000522122 S1PR5Q9H228 398 aa12.53□□□□□ -0.4
SYNPO-205ENST00000522122 MOB1AQ9H8S9 216 aa12.53□□□□□ -0.4
SYNPO-205ENST00000522122 ZNF223Q9UK11 482 aaPredicted RBP12.53□□□□□ -0.4
SYNPO-205ENST00000522122 HBG1P69891 147 aa12.53□□□□□ -0.4
SYNPO-205ENST00000522122 HBG2P69892 147 aa12.53□□□□□ -0.4
SYNPO-205ENST00000522122 C22orf15Q8WYQ4 148 aa12.53□□□□□ -0.4
SYNPO-205ENST00000522122 PRMT8Q9NR22 394 aaPredicted RBP12.53□□□□□ -0.4
SYNPO-205ENST00000522122 ING1Q9UK53 422 aaPredicted RBP12.53□□□□□ -0.4
SYNPO-205ENST00000522122 ZP3P21754 424 aa12.52□□□□□ -0.4
SYNPO-205ENST00000522122 CAPZBP47756 277 aa12.52□□□□□ -0.4
SYNPO-205ENST00000522122 GSG1Q2KHT4 349 aa12.52□□□□□ -0.4
SYNPO-205ENST00000522122 PDLIM3Q53GG5 364 aaPredicted RBP12.52□□□□□ -0.4
SYNPO-205ENST00000522122 TMEM215Q68D42 235 aa12.52□□□□□ -0.4
SYNPO-205ENST00000522122 KCNRGQ8N5I3 272 aa12.52□□□□□ -0.4
SYNPO-205ENST00000522122 AMER3Q8N944 861 aa12.52□□□□□ -0.4
SYNPO-205ENST00000522122 ST8SIA1Q92185 356 aa12.52□□□□□ -0.4
SYNPO-205ENST00000522122 ERVMER34-1Q9H9K5 563 aa12.52□□□□□ -0.4
SYNPO-205ENST00000522122 BCO1Q9HAY6 547 aa12.52□□□□□ -0.4
SYNPO-205ENST00000522122 SMCO4Q9NRQ5 59 aa12.52□□□□□ -0.4
SYNPO-205ENST00000522122 ZNF814B7Z6K7 855 aa12.52□□□□□ -0.4
SYNPO-205ENST00000522122 CD46P15529 392 aa12.52□□□□□ -0.4
SYNPO-205ENST00000522122 PSMB6P28072 239 aa12.52□□□□□ -0.4
SYNPO-205ENST00000522122 CCR5P51681 352 aa12.52□□□□□ -0.4
SYNPO-205ENST00000522122 ELFN2Q5R3F8 820 aa12.52□□□□□ -0.4
SYNPO-205ENST00000522122 OR10K2Q6IF99 312 aa12.52□□□□□ -0.4
SYNPO-205ENST00000522122 SEMA6DQ8NFY4 1073 aa12.52□□□□□ -0.4
SYNPO-205ENST00000522122 ASB13Q8WXK3 278 aa12.52□□□□□ -0.4
SYNPO-205ENST00000522122 ZG16BQ96DA0 208 aa12.52□□□□□ -0.4
SYNPO-205ENST00000522122 ZCCHC4Q9H5U6 513 aa12.52□□□□□ -0.4
SYNPO-205ENST00000522122 CSAG2Q9Y5P2 127 aa12.52□□□□□ -0.4
SYNPO-205ENST00000522122 QDPRP09417 244 aa12.52□□□□□ -0.41
SYNPO-205ENST00000522122 OR4E1P0C645 316 aa12.52□□□□□ -0.41
SYNPO-205ENST00000522122 RAB5CP51148 216 aa12.52□□□□□ -0.41
SYNPO-205ENST00000522122 GPNMBQ14956 572 aa12.52□□□□□ -0.41
SYNPO-205ENST00000522122 ST3GAL2Q16842 350 aa12.52□□□□□ -0.41
SYNPO-205ENST00000522122 GRAMD2AQ8IUY3 354 aa12.52□□□□□ -0.41
SYNPO-205ENST00000522122 OR52N5Q8NH56 324 aa12.52□□□□□ -0.41
SYNPO-205ENST00000522122 TAAR8Q969N4 342 aa12.52□□□□□ -0.41
SYNPO-205ENST00000522122 ARL5BQ96KC2 179 aa12.52□□□□□ -0.41
SYNPO-205ENST00000522122 UTP23Q9BRU9 249 aaKnown RBP12.52□□□□□ -0.41
SYNPO-205ENST00000522122 TAF9BQ9HBM6 251 aa12.52□□□□□ -0.41
SYNPO-205ENST00000522122 DLL4Q9NR61 685 aa12.52□□□□□ -0.41
SYNPO-205ENST00000522122 POMT2Q9UKY4 750 aa12.52□□□□□ -0.41
SYNPO-205ENST00000522122 PADI1Q9ULC6 663 aa12.52□□□□□ -0.41
SYNPO-205ENST00000522122 ZNF705FA8MVS1 300 aaPredicted RBP12.52□□□□□ -0.41
SYNPO-205ENST00000522122 ATP6V1G2-DDX39BF2Z307 99 aa12.52□□□□□ -0.41
SYNPO-205ENST00000522122 ZNF705DP0CH99 300 aaPredicted RBP12.52□□□□□ -0.41
SYNPO-205ENST00000522122 ZNF705BP0CI00 300 aaPredicted RBP12.52□□□□□ -0.41
SYNPO-205ENST00000522122 PNLIPRP2P54317 469 aa12.52□□□□□ -0.41
SYNPO-205ENST00000522122 HIST2H3PS2Q5TEC6 136 aa12.52□□□□□ -0.41
SYNPO-205ENST00000522122 NUDCD2Q8WVJ2 157 aa12.52□□□□□ -0.41
SYNPO-205ENST00000522122 ANKRD9Q96BM1 317 aaPredicted RBP12.52□□□□□ -0.41
SYNPO-205ENST00000522122 AP1S3Q96PC3 154 aa12.52□□□□□ -0.41
SYNPO-205ENST00000522122 A0A087WUJ7 227 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 SERPINF1P36955 418 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 GPR85P60893 370 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 THEM4Q5T1C6 240 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 SHEQ5VZ18 495 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 GLDNQ6ZMI3 551 aaPredicted RBP12.51□□□□□ -0.41
SYNPO-205ENST00000522122 TEX19Q8NA77 164 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 ST8SIA4Q92187 359 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 SDHCQ99643 169 aaPredicted RBP12.51□□□□□ -0.41
SYNPO-205ENST00000522122 TRAF4Q9BUZ4 470 aaPredicted RBP12.51□□□□□ -0.41
SYNPO-205ENST00000522122 CALHM2Q9HA72 323 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms