RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 OR1F12Q8NHA8 337 aa18.66■□□□□ 0.58
R3HCC1-208ENST00000522012 HDHD2Q9H0R4 259 aa18.66■□□□□ 0.58
R3HCC1-208ENST00000522012 R4GMQ9 66 aa18.66■□□□□ 0.58
R3HCC1-208ENST00000522012 SPTA1P02549 2419 aa18.66■□□□□ 0.58
R3HCC1-208ENST00000522012 SMIM31A0A1B0GVY4 71 aa18.65■□□□□ 0.58
R3HCC1-208ENST00000522012 A0A1W2PR80 420 aa18.65■□□□□ 0.58
R3HCC1-208ENST00000522012 B8ZZF3 427 aa18.65■□□□□ 0.58
R3HCC1-208ENST00000522012 LRRTM2O43300 516 aa18.65■□□□□ 0.58
R3HCC1-208ENST00000522012 SYNGR3O43761 229 aa18.65■□□□□ 0.58
R3HCC1-208ENST00000522012 IL32P24001 234 aa18.65■□□□□ 0.58
R3HCC1-208ENST00000522012 HTR5AP47898 357 aa18.65■□□□□ 0.58
R3HCC1-208ENST00000522012 NANOS3P60323 173 aaKnown RBP18.65■□□□□ 0.58
R3HCC1-208ENST00000522012 MFGE8Q08431 387 aaPredicted RBP18.65■□□□□ 0.58
R3HCC1-208ENST00000522012 ECH1Q13011 328 aa18.65■□□□□ 0.58
R3HCC1-208ENST00000522012 ALKBH1Q13686 389 aaKnown RBP18.65■□□□□ 0.58
R3HCC1-208ENST00000522012 CDK5R1Q15078 307 aa18.65■□□□□ 0.58
R3HCC1-208ENST00000522012 GSG1Q2KHT4 349 aa18.65■□□□□ 0.58
R3HCC1-208ENST00000522012 ZNF829Q3KNS6 432 aaPredicted RBP18.65■□□□□ 0.58
R3HCC1-208ENST00000522012 DMKNQ6E0U4 476 aaPredicted RBP18.65■□□□□ 0.58
R3HCC1-208ENST00000522012 ALDH16A1Q8IZ83 802 aa18.65■□□□□ 0.58
R3HCC1-208ENST00000522012 TMEM203Q969S6 136 aa18.65■□□□□ 0.58
R3HCC1-208ENST00000522012 KCNJ15Q99712 375 aa18.65■□□□□ 0.58
R3HCC1-208ENST00000522012 NAA50Q9GZZ1 169 aaKnown RBP18.65■□□□□ 0.58
R3HCC1-208ENST00000522012 NIPAL2Q9H841 368 aa18.65■□□□□ 0.58
R3HCC1-208ENST00000522012 NOX3Q9HBY0 568 aa18.65■□□□□ 0.58
R3HCC1-208ENST00000522012 BRD7Q9NPI1 651 aa18.65■□□□□ 0.58
R3HCC1-208ENST00000522012 SLC17A5Q9NRA2 495 aa18.65■□□□□ 0.58
R3HCC1-208ENST00000522012 NDUFB11Q9NX14 153 aa18.65■□□□□ 0.58
R3HCC1-208ENST00000522012 NDUFA13Q9P0J0 144 aa18.65■□□□□ 0.58
R3HCC1-208ENST00000522012 CEPT1Q9Y6K0 416 aa18.65■□□□□ 0.58
R3HCC1-208ENST00000522012 A0A1B0GUH1 482 aa18.64■□□□□ 0.58
R3HCC1-208ENST00000522012 TMEM269A0A1B0GVZ9 245 aa18.64■□□□□ 0.58
R3HCC1-208ENST00000522012 F5H5K5 113 aa18.64■□□□□ 0.58
R3HCC1-208ENST00000522012 PLPP2O43688 288 aa18.64■□□□□ 0.58
R3HCC1-208ENST00000522012 PNPP00491 289 aa18.64■□□□□ 0.58
R3HCC1-208ENST00000522012 HOXB1P14653 301 aaPredicted RBP18.64■□□□□ 0.58
R3HCC1-208ENST00000522012 DCTDP32321 178 aa18.64■□□□□ 0.58
R3HCC1-208ENST00000522012 UQCRFS1P47985 274 aa18.64■□□□□ 0.58
R3HCC1-208ENST00000522012 GDI2P50395 445 aaKnown RBP18.64■□□□□ 0.58
R3HCC1-208ENST00000522012 GPR50Q13585 617 aa18.64■□□□□ 0.58
R3HCC1-208ENST00000522012 ZNF544Q6NX49 715 aa18.64■□□□□ 0.58
R3HCC1-208ENST00000522012 STAC2Q6ZMT1 411 aa18.64■□□□□ 0.58
R3HCC1-208ENST00000522012 P2RY8Q86VZ1 359 aa18.64■□□□□ 0.58
R3HCC1-208ENST00000522012 ZNF283Q8N7M2 679 aa18.64■□□□□ 0.58
R3HCC1-208ENST00000522012 OR2G2Q8NGZ5 317 aa18.64■□□□□ 0.58
R3HCC1-208ENST00000522012 SLC7A6Q92536 515 aa18.64■□□□□ 0.58
R3HCC1-208ENST00000522012 SPTSSAQ969W0 71 aa18.64■□□□□ 0.58
R3HCC1-208ENST00000522012 TMED9Q9BVK6 235 aa18.64■□□□□ 0.58
R3HCC1-208ENST00000522012 B3GNT2Q9NY97 397 aa18.64■□□□□ 0.58
R3HCC1-208ENST00000522012 FRRS1LQ9P0K9 344 aa18.64■□□□□ 0.58
R3HCC1-208ENST00000522012 SHANK1Q9Y566 2161 aa18.64■□□□□ 0.57
R3HCC1-208ENST00000522012 OR6C6A6NF89 314 aa18.64■□□□□ 0.57
R3HCC1-208ENST00000522012 LOC110117498-PIK3R3F6TDL0 507 aa18.64■□□□□ 0.57
R3HCC1-208ENST00000522012 SRSF10O75494 262 aaKnown RBP18.64■□□□□ 0.57
R3HCC1-208ENST00000522012 NR4A1P22736 598 aa18.64■□□□□ 0.57
R3HCC1-208ENST00000522012 GADD45AP24522 165 aa18.64■□□□□ 0.57
R3HCC1-208ENST00000522012 CX3CR1P49238 355 aa18.64■□□□□ 0.57
R3HCC1-208ENST00000522012 RPS25P62851 125 aaKnown RBP18.64■□□□□ 0.57
R3HCC1-208ENST00000522012 PLP2Q04941 152 aa18.64■□□□□ 0.57
R3HCC1-208ENST00000522012 FDX2Q6P4F2 183 aa18.64■□□□□ 0.57
R3HCC1-208ENST00000522012 MDP1Q86V88 176 aa18.64■□□□□ 0.57
R3HCC1-208ENST00000522012 PRSS35Q8N3Z0 413 aa18.64■□□□□ 0.57
R3HCC1-208ENST00000522012 ZNF843Q8N446 348 aa18.64■□□□□ 0.57
R3HCC1-208ENST00000522012 C17orf78Q8N4C9 275 aa18.64■□□□□ 0.57
R3HCC1-208ENST00000522012 CPEB3Q8NE35 698 aaKnown RBP18.64■□□□□ 0.57
R3HCC1-208ENST00000522012 GHSRQ92847 366 aa18.64■□□□□ 0.57
R3HCC1-208ENST00000522012 SMIM19Q96E16 107 aa18.64■□□□□ 0.57
R3HCC1-208ENST00000522012 BOD1Q96IK1 185 aa18.64■□□□□ 0.57
R3HCC1-208ENST00000522012 COQ7Q99807 217 aa18.64■□□□□ 0.57
R3HCC1-208ENST00000522012 HDHD5Q9BXW7 423 aa18.64■□□□□ 0.57
R3HCC1-208ENST00000522012 COQ3Q9NZJ6 369 aa18.64■□□□□ 0.57
R3HCC1-208ENST00000522012 JKAMPQ9P055 326 aa18.64■□□□□ 0.57
R3HCC1-208ENST00000522012 N6AMT1Q9Y5N5 214 aa18.64■□□□□ 0.57
R3HCC1-208ENST00000522012 PHF3Q92576 2039 aaKnown RBP18.63■□□□□ 0.57
R3HCC1-208ENST00000522012 ARPC4-TTLL3A0A0A6YYG9 625 aa18.63■□□□□ 0.57
R3HCC1-208ENST00000522012 DBHP09172 617 aa18.63■□□□□ 0.57
R3HCC1-208ENST00000522012 PSMA1P25786 263 aaKnown RBP18.63■□□□□ 0.57
R3HCC1-208ENST00000522012 ADORA2A-AS1P86434 159 aa18.63■□□□□ 0.57
R3HCC1-208ENST00000522012 FAM27E3Q08E93 113 aa18.63■□□□□ 0.57
R3HCC1-208ENST00000522012 WDR38Q5JTN6 314 aa18.63■□□□□ 0.57
R3HCC1-208ENST00000522012 ANKRD13BQ86YJ7 626 aa18.63■□□□□ 0.57
R3HCC1-208ENST00000522012 WDR31Q8NA23 367 aa18.63■□□□□ 0.57
R3HCC1-208ENST00000522012 PPP1R14AQ96A00 147 aa18.63■□□□□ 0.57
R3HCC1-208ENST00000522012 CCDC120Q96HB5 630 aa18.63■□□□□ 0.57
R3HCC1-208ENST00000522012 C4orf45Q96LM5 186 aa18.63■□□□□ 0.57
R3HCC1-208ENST00000522012 PDCD1LG2Q9BQ51 273 aa18.63■□□□□ 0.57
R3HCC1-208ENST00000522012 RBM38Q9H0Z9 239 aaKnown RBP18.63■□□□□ 0.57
R3HCC1-208ENST00000522012 OR51E2Q9H255 320 aa18.63■□□□□ 0.57
R3HCC1-208ENST00000522012 ELOVL5Q9NYP7 299 aa18.63■□□□□ 0.57
R3HCC1-208ENST00000522012 OR52A1Q9UKL2 312 aa18.63■□□□□ 0.57
R3HCC1-208ENST00000522012 SLC22A13Q9Y226 551 aa18.63■□□□□ 0.57
R3HCC1-208ENST00000522012 ARHGAP21Q5T5U3 1957 aa18.63■□□□□ 0.57
R3HCC1-208ENST00000522012 IQCMA0A1B0GVH7 501 aa18.62■□□□□ 0.57
R3HCC1-208ENST00000522012 NOL3O60936 208 aaKnown RBP18.62■□□□□ 0.57
R3HCC1-208ENST00000522012 SLC2A1P11166 492 aa18.62■□□□□ 0.57
R3HCC1-208ENST00000522012 PSMB1P20618 241 aaKnown RBP18.62■□□□□ 0.57
R3HCC1-208ENST00000522012 APEX1P27695 318 aaKnown RBP18.62■□□□□ 0.57
R3HCC1-208ENST00000522012 CHRNB4P30926 498 aa18.62■□□□□ 0.57
R3HCC1-208ENST00000522012 GABRA5P31644 462 aa18.62■□□□□ 0.57
R3HCC1-208ENST00000522012 KIR3DL2P43630 455 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms