RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 A0A1W2PPK0 400 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 A8MXK9 166 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 ANKRD65E5RJM6 399 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 RGS16O15492 202 aaPredicted RBP3.11□□□□□ -1.91
VPS13B-208ENST00000521037 HSPA12AO43301 675 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 RIPK2O43353 540 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 SH3BGRLO75368 114 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 WISP3O95389 354 aaPredicted RBP3.11□□□□□ -1.91
VPS13B-208ENST00000521037 PSMG1O95456 288 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 H6PDO95479 791 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 DIRAS3O95661 229 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 ATP6V1G2O95670 118 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 PTBP3O95758 552 aaKnown RBP3.11□□□□□ -1.91
VPS13B-208ENST00000521037 IGKV3-15P01624 115 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 IGHV4-59P01825 116 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 ATP1B1P05026 303 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 PPIAL4GP0DN37 164 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 PIK3R1P27986 724 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 STX2P32856 288 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 MAP3K8P41279 467 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 MAGEB1P43366 347 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 THBS3P49746 956 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 SLC18A1P54219 525 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 SH3BGRP55822 239 aaPredicted RBP3.11□□□□□ -1.91
VPS13B-208ENST00000521037 AP1S2P56377 157 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 CARD18P57730 90 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 NANOS2P60321 138 aaKnown RBP3.11□□□□□ -1.91
VPS13B-208ENST00000521037 SEC61BP60468 96 aaKnown RBP3.11□□□□□ -1.91
VPS13B-208ENST00000521037 MAGOHP61326 146 aaKnown RBP3.11□□□□□ -1.91
VPS13B-208ENST00000521037 TRA2BP62995 288 aaKnown RBP3.11□□□□□ -1.91
VPS13B-208ENST00000521037 ELF3P78545 371 aaPredicted RBP3.11□□□□□ -1.91
VPS13B-208ENST00000521037 DR1Q01658 176 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 ZNF763Q0D2J5 394 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 HERPUD1Q15011 391 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 MAD2L1BPQ15013 274 aaPredicted RBP3.11□□□□□ -1.91
VPS13B-208ENST00000521037 PPP1R7Q15435 360 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 OASLQ15646 514 aaKnown RBP3.11□□□□□ -1.91
VPS13B-208ENST00000521037 UAP1Q16222 522 aaPredicted RBP3.11□□□□□ -1.91
VPS13B-208ENST00000521037 CTF1Q16619 201 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 ATP6AP1LQ52LC2 224 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 HIKESHIQ53FT3 197 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 TNFAIP8L3Q5GJ75 292 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 DEFB121Q5J5C9 76 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 CPTPQ5TA50 214 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 GRTP1Q5TC63 336 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 PXDC1Q5TGL8 231 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 OR4C11Q6IEV9 310 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 C11orf63Q6NUN7 778 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 BTNL8Q6UX41 500 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 DLEU7Q6UYE1 221 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 BRD3OSQ6XYD6 125 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 ZNF620Q6ZNG0 422 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 Q75L30 129 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 TRPM8Q7Z2W7 1104 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 ADAMTSL2Q86TH1 951 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 PARP8Q8N3A8 854 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 ZIC4Q8N9L1 334 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 OR2AK2Q8NG84 335 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 OR52R1Q8NGF1 315 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 SSMEM1Q8WWF3 244 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 MAGOHBQ96A72 148 aaKnown RBP3.11□□□□□ -1.91
VPS13B-208ENST00000521037 CNRIP1Q96F85 164 aaPredicted RBP3.11□□□□□ -1.91
VPS13B-208ENST00000521037 MS4A14Q96JA4 679 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 SERPINB12Q96P63 405 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 SLC38A2Q96QD8 506 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 PELOQ9BRX2 385 aaKnown RBP3.11□□□□□ -1.91
VPS13B-208ENST00000521037 PRRG4Q9BZD6 226 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 CENPHQ9H3R5 247 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 RIBC2Q9H4K1 309 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 SLA2Q9H6Q3 261 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 Q9N2K0 584 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 TNFRSF19Q9NS68 423 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 SLC7A10Q9NS82 523 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 FAM212BQ9NTI7 297 aaPredicted RBP3.11□□□□□ -1.91
VPS13B-208ENST00000521037 INTS9Q9NV88 658 aaKnown RBP3.11□□□□□ -1.91
VPS13B-208ENST00000521037 PAQR5Q9NXK6 330 aaPredicted RBP3.11□□□□□ -1.91
VPS13B-208ENST00000521037 TAS2R16Q9NYV7 291 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 SENP1Q9P0U3 644 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 SEC14L4Q9UDX3 406 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 TFR2Q9UP52 801 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 VDAC3Q9Y277 283 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 PAM16Q9Y3D7 125 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 WIPI2Q9Y4P8 454 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 AUP1Q9Y679 476 aa3.11□□□□□ -1.91
VPS13B-208ENST00000521037 IGHV2OR16-5A0A0B4J2B6 119 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 SH3PXD2BA1X283 911 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 NR5A2O00482 541 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 SOCS2O14508 198 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 PPIHO43447 177 aaKnown RBP3.1□□□□□ -1.91
VPS13B-208ENST00000521037 PSTPIP1O43586 416 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 SNX3O60493 162 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 PRAF2O60831 178 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 SYNGR4O95473 234 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 AK1P00568 194 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 FGGP02679 453 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 THRBP10828 461 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 NCF1P14598 390 aaPredicted RBP3.1□□□□□ -1.91
VPS13B-208ENST00000521037 NPR2P20594 1047 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 ALDH3A1P30838 453 aa3.1□□□□□ -1.91
VPS13B-208ENST00000521037 HOXD3P31249 432 aaPredicted RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms