RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 TMEM68Q96MH6 324 aa3.37□□□□□ -1.87
CLK4-207ENST00000520909 MBOAT4Q96T53 435 aa3.37□□□□□ -1.87
CLK4-207ENST00000520909 FEVQ99581 238 aa3.37□□□□□ -1.87
CLK4-207ENST00000520909 KLHDC3Q9BQ90 382 aa3.37□□□□□ -1.87
CLK4-207ENST00000520909 OSBPL11Q9BXB4 747 aa3.37□□□□□ -1.87
CLK4-207ENST00000520909 OSBPL10Q9BXB5 764 aa3.37□□□□□ -1.87
CLK4-207ENST00000520909 RTN4RQ9BZR6 473 aa3.37□□□□□ -1.87
CLK4-207ENST00000520909 UCK2Q9BZX2 261 aa3.37□□□□□ -1.87
CLK4-207ENST00000520909 POLR2J2Q9GZM3 115 aaKnown RBP3.37□□□□□ -1.87
CLK4-207ENST00000520909 GABARAPL1Q9H0R8 117 aa3.37□□□□□ -1.87
CLK4-207ENST00000520909 POLR2J3Q9H1A7 115 aaKnown RBP3.37□□□□□ -1.87
CLK4-207ENST00000520909 RIBC2Q9H4K1 309 aa3.37□□□□□ -1.87
CLK4-207ENST00000520909 EXOSC3Q9NQT5 275 aaKnown RBP3.37□□□□□ -1.87
CLK4-207ENST00000520909 SDHAF3Q9NRP4 125 aa3.37□□□□□ -1.87
CLK4-207ENST00000520909 KRT84Q9NSB2 600 aa3.37□□□□□ -1.87
CLK4-207ENST00000520909 MAN2C1Q9NTJ4 1040 aa3.37□□□□□ -1.87
CLK4-207ENST00000520909 HPF1Q9NWY4 346 aa3.37□□□□□ -1.87
CLK4-207ENST00000520909 SMPD3Q9NY59 655 aaPredicted RBP3.37□□□□□ -1.87
CLK4-207ENST00000520909 USE1Q9NZ43 259 aa3.37□□□□□ -1.87
CLK4-207ENST00000520909 STMN3Q9NZ72 180 aa3.37□□□□□ -1.87
CLK4-207ENST00000520909 KLRF1Q9NZS2 232 aa3.37□□□□□ -1.87
CLK4-207ENST00000520909 MED11Q9P086 117 aa3.37□□□□□ -1.87
CLK4-207ENST00000520909 ABI3Q9P2A4 366 aa3.37□□□□□ -1.87
CLK4-207ENST00000520909 TEKT2Q9UIF3 430 aa3.37□□□□□ -1.87
CLK4-207ENST00000520909 MGAT4BQ9UQ53 548 aa3.37□□□□□ -1.87
CLK4-207ENST00000520909 AP4B1Q9Y6B7 739 aa3.37□□□□□ -1.87
CLK4-207ENST00000520909 APC2O95996 2303 aa3.37□□□□□ -1.87
CLK4-207ENST00000520909 AKAP13Q12802 2813 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 ACACAQ13085 2346 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 URB1O60287 2271 aaKnown RBP3.36□□□□□ -1.87
CLK4-207ENST00000520909 A0A0B4J2E0 115 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 A0A1B0GX12 115 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 ARRDC5A6NEK1 342 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 KLLNB2CW77 178 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 KPNA4O00629 521 aaPredicted RBP3.36□□□□□ -1.87
CLK4-207ENST00000520909 DLGAP1O14490 977 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 BCKDKO14874 412 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 CHP2O43745 196 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 F10P00742 488 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 P04436 131 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 RPSAP08865 295 aaKnown RBP3.36□□□□□ -1.87
CLK4-207ENST00000520909 CCL3P10147 92 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 IFI30P13284 250 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 CBLP22681 906 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 CXCR1P25024 350 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 POLR2IP36954 125 aaKnown RBP3.36□□□□□ -1.87
CLK4-207ENST00000520909 CAPGP40121 348 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 PTGDSP41222 190 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 CASP3P42574 277 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 SLC1A3P43003 542 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 GPR4P46093 362 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 GSSP48637 474 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 CYB561P49447 251 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 P2RX1P51575 399 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 CCL11P51671 97 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 TPD52P55327 224 aaPredicted RBP3.36□□□□□ -1.87
CLK4-207ENST00000520909 ADARB1P78563 741 aaKnown RBP3.36□□□□□ -1.87
CLK4-207ENST00000520909 PPP2R2BQ00005 443 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 C17orf67Q0P5P2 114 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 MERTKQ12866 999 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 MED21Q13503 144 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 QPRTQ15274 297 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 TOMM34Q15785 309 aaPredicted RBP3.36□□□□□ -1.87
CLK4-207ENST00000520909 NHSL2Q5HYW2 709 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 CXorf66Q5JRM2 361 aaPredicted RBP3.36□□□□□ -1.87
CLK4-207ENST00000520909 WLSQ5T9L3 541 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 PRAMEF20Q5VT98 475 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 AGAP7PQ5VUJ5 663 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 TTC23Q5W5X9 447 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 SLC22A10Q63ZE4 541 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 KDM4DQ6B0I6 523 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 ZNF770Q6IQ21 691 aaPredicted RBP3.36□□□□□ -1.87
CLK4-207ENST00000520909 SLC30A6Q6NXT4 461 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 ULK3Q6PHR2 472 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 WDR88Q6ZMY6 472 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 Q6ZR54 194 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 RTL4Q6ZR62 310 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 LINC00696Q6ZRV3 163 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 MBOAT2Q6ZWT7 520 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 SLC16A9Q7RTY1 509 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 ZER1Q7Z7L7 766 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 MISPQ8IVT2 679 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 NRMQ8IXM6 262 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 GPALPP1Q8IXQ4 340 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 DND1Q8IYX4 353 aaKnown RBP3.36□□□□□ -1.87
CLK4-207ENST00000520909 CDK20Q8IZL9 346 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 CYP4Z2PQ8N1L4 340 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 C10orf53Q8N6V4 93 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 LSMEM1Q8N8F7 131 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 FAM71CQ8NEG0 241 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 ATP6V1C2Q8NEY4 427 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 OR4K17Q8NGC6 315 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 PFN4Q8NHR9 129 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 GNPDA2Q8TDQ7 276 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 GPR119Q8TDV5 335 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 DNAJA4Q8WW22 397 aaPredicted RBP3.36□□□□□ -1.87
CLK4-207ENST00000520909 TMEM239Q8WW34 195 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 PSMF1Q92530 271 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 HTRA1Q92743 480 aa3.36□□□□□ -1.87
CLK4-207ENST00000520909 RNF125Q96EQ8 232 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms