RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 KCNMB1Q16558 191 aa12.1□□□□□ -0.47
VEGFA-221ENST00000520265 MBNL2Q5VZF2 373 aaKnown RBP12.1□□□□□ -0.47
VEGFA-221ENST00000520265 C1orf174Q8IYL3 243 aa12.1□□□□□ -0.47
VEGFA-221ENST00000520265 OR5L1Q8NGL2 311 aa12.1□□□□□ -0.47
VEGFA-221ENST00000520265 PLEKHA8Q96JA3 519 aa12.1□□□□□ -0.47
VEGFA-221ENST00000520265 ATF6BQ99941 703 aa12.1□□□□□ -0.47
VEGFA-221ENST00000520265 EGLN1Q9GZT9 426 aa12.1□□□□□ -0.47
VEGFA-221ENST00000520265 ZNF275Q9NSD4 429 aaPredicted RBP12.1□□□□□ -0.47
VEGFA-221ENST00000520265 TBCCD1Q9NVR7 557 aa12.1□□□□□ -0.47
VEGFA-221ENST00000520265 DNAJB9Q9UBS3 223 aa12.1□□□□□ -0.47
VEGFA-221ENST00000520265 N6AMT1Q9Y5N5 214 aa12.1□□□□□ -0.47
VEGFA-221ENST00000520265 ZFHX3Q15911 3703 aa12.1□□□□□ -0.47
VEGFA-221ENST00000520265 TLN2Q9Y4G6 2542 aa12.09□□□□□ -0.47
VEGFA-221ENST00000520265 IGHV1-69-2A0A0G2JMI3 117 aa12.09□□□□□ -0.47
VEGFA-221ENST00000520265 TCRBV3S1A0A5B6 114 aa12.09□□□□□ -0.47
VEGFA-221ENST00000520265 ZSCAN5BA6NJL1 495 aa12.09□□□□□ -0.47
VEGFA-221ENST00000520265 FAM183AA6NL82 134 aa12.09□□□□□ -0.47
VEGFA-221ENST00000520265 VWC2LB2RUY7 222 aa12.09□□□□□ -0.47
VEGFA-221ENST00000520265 IGHV1-46P01743 117 aa12.09□□□□□ -0.47
VEGFA-221ENST00000520265 PAICSP22234 425 aaKnown RBP12.09□□□□□ -0.47
VEGFA-221ENST00000520265 PRKACGP22612 351 aa12.09□□□□□ -0.47
VEGFA-221ENST00000520265 TNFSF4P23510 183 aa12.09□□□□□ -0.47
VEGFA-221ENST00000520265 FMO3P31513 532 aa12.09□□□□□ -0.47
VEGFA-221ENST00000520265 RGS6P49758 472 aa12.09□□□□□ -0.47
VEGFA-221ENST00000520265 MVKQ03426 396 aa12.09□□□□□ -0.47
VEGFA-221ENST00000520265 COX10Q12887 443 aa12.09□□□□□ -0.47
VEGFA-221ENST00000520265 GK3PQ14409 553 aa12.09□□□□□ -0.47
VEGFA-221ENST00000520265 AVPI1Q5T686 147 aa12.09□□□□□ -0.47
VEGFA-221ENST00000520265 FAM166AQ6J272 317 aa12.09□□□□□ -0.47
VEGFA-221ENST00000520265 SLC18B1Q6NT16 456 aa12.09□□□□□ -0.47
VEGFA-221ENST00000520265 LYPD4Q6UWN0 246 aa12.09□□□□□ -0.47
VEGFA-221ENST00000520265 SPATC1Q76KD6 591 aa12.09□□□□□ -0.47
VEGFA-221ENST00000520265 TMEM179BQ7Z7N9 219 aa12.09□□□□□ -0.47
VEGFA-221ENST00000520265 ZBTB46Q86UZ6 589 aa12.09□□□□□ -0.47
VEGFA-221ENST00000520265 LNX2Q8N448 690 aa12.09□□□□□ -0.47
VEGFA-221ENST00000520265 OR2Z1Q8NG97 314 aa12.09□□□□□ -0.47
VEGFA-221ENST00000520265 YIPF5Q969M3 257 aa12.09□□□□□ -0.47
VEGFA-221ENST00000520265 CMBLQ96DG6 245 aa12.09□□□□□ -0.47
VEGFA-221ENST00000520265 COG8Q96MW5 612 aa12.09□□□□□ -0.47
VEGFA-221ENST00000520265 COQ7Q99807 217 aa12.09□□□□□ -0.47
VEGFA-221ENST00000520265 COPS4Q9BT78 406 aa12.09□□□□□ -0.47
VEGFA-221ENST00000520265 TEX12Q9BXU0 123 aa12.09□□□□□ -0.47
VEGFA-221ENST00000520265 MED20Q9H944 212 aa12.09□□□□□ -0.47
VEGFA-221ENST00000520265 WDR76Q9H967 626 aa12.09□□□□□ -0.47
VEGFA-221ENST00000520265 CYSLTR2Q9NS75 346 aa12.09□□□□□ -0.47
VEGFA-221ENST00000520265 CENPMQ9NSP4 180 aa12.09□□□□□ -0.47
VEGFA-221ENST00000520265 KCNS2Q9ULS6 477 aa12.09□□□□□ -0.47
VEGFA-221ENST00000520265 STARD10Q9Y365 291 aa12.09□□□□□ -0.47
VEGFA-221ENST00000520265 ABCA1O95477 2261 aa12.08□□□□□ -0.48
VEGFA-221ENST00000520265 ISPDA4D126 451 aa12.08□□□□□ -0.48
VEGFA-221ENST00000520265 H3BSA7 217 aa12.08□□□□□ -0.48
VEGFA-221ENST00000520265 DEAF1O75398 565 aaPredicted RBP12.08□□□□□ -0.48
VEGFA-221ENST00000520265 TGFAP01135 160 aa12.08□□□□□ -0.48
VEGFA-221ENST00000520265 LCATP04180 440 aa12.08□□□□□ -0.48
VEGFA-221ENST00000520265 CLUP10909 449 aa12.08□□□□□ -0.48
VEGFA-221ENST00000520265 GIFP27352 417 aa12.08□□□□□ -0.48
VEGFA-221ENST00000520265 LIPAP38571 399 aa12.08□□□□□ -0.48
VEGFA-221ENST00000520265 TNFAIP6P98066 277 aaPredicted RBP12.08□□□□□ -0.48
VEGFA-221ENST00000520265 PSG7Q13046 419 aa12.08□□□□□ -0.48
VEGFA-221ENST00000520265 HLXQ14774 488 aaPredicted RBP12.08□□□□□ -0.48
VEGFA-221ENST00000520265 HFEQ30201 348 aa12.08□□□□□ -0.48
VEGFA-221ENST00000520265 KLHL12Q53G59 568 aa12.08□□□□□ -0.48
VEGFA-221ENST00000520265 SLC27A4Q6P1M0 643 aa12.08□□□□□ -0.48
VEGFA-221ENST00000520265 BHLHE23Q8NDY6 225 aa12.08□□□□□ -0.48
VEGFA-221ENST00000520265 CCL17Q92583 94 aa12.08□□□□□ -0.48
VEGFA-221ENST00000520265 SPTSSAQ969W0 71 aa12.08□□□□□ -0.48
VEGFA-221ENST00000520265 APOBEC3DQ96AK3 386 aaPredicted RBP12.08□□□□□ -0.48
VEGFA-221ENST00000520265 ELMOD3Q96FG2 381 aa12.08□□□□□ -0.48
VEGFA-221ENST00000520265 TIMD4Q96H15 378 aa12.08□□□□□ -0.48
VEGFA-221ENST00000520265 DCLRE1CQ96SD1 692 aaKnown RBP12.08□□□□□ -0.48
VEGFA-221ENST00000520265 OR51V1Q9H2C8 321 aa12.08□□□□□ -0.48
VEGFA-221ENST00000520265 LPAR2Q9HBW0 351 aa12.08□□□□□ -0.48
VEGFA-221ENST00000520265 MRPL22Q9NWU5 206 aaKnown RBP12.08□□□□□ -0.48
VEGFA-221ENST00000520265 CGGBP1Q9UFW8 167 aaPredicted RBP12.08□□□□□ -0.48
VEGFA-221ENST00000520265 KCNG2Q9UJ96 466 aa12.08□□□□□ -0.48
VEGFA-221ENST00000520265 PURGQ9UJV8 347 aaKnown RBP12.08□□□□□ -0.48
VEGFA-221ENST00000520265 COMMD3-BMI1R4GMX3 469 aa12.08□□□□□ -0.48
VEGFA-221ENST00000520265 ZANQ9Y493 2812 aa12.07□□□□□ -0.48
VEGFA-221ENST00000520265 ARRDC5A6NEK1 342 aa12.07□□□□□ -0.48
VEGFA-221ENST00000520265 CLDN25C9JDP6 229 aa12.07□□□□□ -0.48
VEGFA-221ENST00000520265 SPI1P17947 270 aa12.07□□□□□ -0.48
VEGFA-221ENST00000520265 GRK5P34947 590 aa12.07□□□□□ -0.48
VEGFA-221ENST00000520265 ENTPD1P49961 510 aa12.07□□□□□ -0.48
VEGFA-221ENST00000520265 TPTEP56180 551 aa12.07□□□□□ -0.48
VEGFA-221ENST00000520265 PRSS12P56730 875 aa12.07□□□□□ -0.48
VEGFA-221ENST00000520265 RPS7P62081 194 aaKnown RBP12.07□□□□□ -0.48
VEGFA-221ENST00000520265 CHD3Q12873 2000 aaKnown RBP12.07□□□□□ -0.48
VEGFA-221ENST00000520265 ECH1Q13011 328 aa12.07□□□□□ -0.48
VEGFA-221ENST00000520265 MALLQ13021 153 aa12.07□□□□□ -0.48
VEGFA-221ENST00000520265 RIN1Q13671 783 aa12.07□□□□□ -0.48
VEGFA-221ENST00000520265 GINS1Q14691 196 aa12.07□□□□□ -0.48
VEGFA-221ENST00000520265 CHRFAM7AQ494W8 412 aa12.07□□□□□ -0.48
VEGFA-221ENST00000520265 TMEM255AQ5JRV8 349 aa12.07□□□□□ -0.48
VEGFA-221ENST00000520265 CCDC121Q6ZUS5 278 aa12.07□□□□□ -0.48
VEGFA-221ENST00000520265 DCXRQ7Z4W1 244 aa12.07□□□□□ -0.48
VEGFA-221ENST00000520265 ERI1Q8IV48 349 aaKnown RBP12.07□□□□□ -0.48
VEGFA-221ENST00000520265 ZNF511Q8NB15 262 aa12.07□□□□□ -0.48
VEGFA-221ENST00000520265 OR6N2Q8NGY6 317 aa12.07□□□□□ -0.48
VEGFA-221ENST00000520265 MSI2Q96DH6 328 aaKnown RBP12.07□□□□□ -0.48
VEGFA-221ENST00000520265 HCAR1Q9BXC0 346 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms