RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 RBBP4Q09028 425 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 SNTB1Q13884 538 aaKnown RBP5.97□□□□□ -1.45
SDCBP-208ENST00000520228 SCARB2Q14108 478 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 SELPLGQ14242 412 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 FBXL19-AS1Q494R0 122 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 REP15Q6BDI9 236 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 NANOGP8Q6NSW7 305 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 C3orf33Q6P1S2 294 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 ZNF550Q7Z398 422 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 GRINAQ7Z429 371 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 ZGRF1Q86YA3 2104 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 ACBD4Q8NC06 268 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 RELL2Q8NC24 303 aaPredicted RBP5.97□□□□□ -1.45
SDCBP-208ENST00000520228 TSPAN14Q8NG11 270 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 OR8J3Q8NGG0 315 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 OR10A6Q8NH74 314 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 ROBO4Q8WZ75 1007 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 RNASE6Q93091 150 aaKnown RBP5.97□□□□□ -1.45
SDCBP-208ENST00000520228 CPNE4Q96A23 557 aaPredicted RBP5.97□□□□□ -1.45
SDCBP-208ENST00000520228 LRRC58Q96CX6 371 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 STARD4Q96DR4 205 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 OR5B2Q96R09 309 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 ECSITQ9BQ95 431 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 SLC39A3Q9BRY0 314 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 BTBD10Q9BSF8 475 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 KAT8Q9H7Z6 458 aaKnown RBP5.97□□□□□ -1.45
SDCBP-208ENST00000520228 NANOGQ9H9S0 305 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 CTPS2Q9NRF8 586 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 GID8Q9NWU2 228 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 HAO2Q9NYQ3 351 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 CHRNA9Q9UGM1 479 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 ANGPT4Q9Y264 503 aa5.97□□□□□ -1.45
SDCBP-208ENST00000520228 A0A087WYN8 130 aa5.96□□□□□ -1.46
SDCBP-208ENST00000520228 TMED7-TICAM2A0A0A6YYA0 188 aa5.96□□□□□ -1.46
SDCBP-208ENST00000520228 A8MXE2 369 aa5.96□□□□□ -1.46
SDCBP-208ENST00000520228 FXYD1O00168 92 aa5.96□□□□□ -1.46
SDCBP-208ENST00000520228 SULT2B1O00204 365 aa5.96□□□□□ -1.46
SDCBP-208ENST00000520228 UBE2CO00762 179 aa5.96□□□□□ -1.46
SDCBP-208ENST00000520228 SNX3O60493 162 aa5.96□□□□□ -1.46
SDCBP-208ENST00000520228 COX4I1P13073 169 aa5.96□□□□□ -1.46
SDCBP-208ENST00000520228 PRG2P13727 222 aa5.96□□□□□ -1.46
SDCBP-208ENST00000520228 DNASE1P24855 282 aa5.96□□□□□ -1.46
SDCBP-208ENST00000520228 CXCR1P25024 350 aa5.96□□□□□ -1.46
SDCBP-208ENST00000520228 PCGF2P35227 344 aa5.96□□□□□ -1.46
SDCBP-208ENST00000520228 PEX19P40855 299 aa5.96□□□□□ -1.46
SDCBP-208ENST00000520228 ACAA2P42765 397 aaKnown RBP5.96□□□□□ -1.46
SDCBP-208ENST00000520228 CLK1P49759 484 aaKnown RBP5.96□□□□□ -1.46
SDCBP-208ENST00000520228 CTBP2P56545 445 aa5.96□□□□□ -1.46
SDCBP-208ENST00000520228 ZNF239Q16600 458 aaKnown RBP5.96□□□□□ -1.46
SDCBP-208ENST00000520228 SYT14P1Q58G82 188 aa5.96□□□□□ -1.46
SDCBP-208ENST00000520228 DHRS4L2Q6PKH6 230 aa5.96□□□□□ -1.46
SDCBP-208ENST00000520228 TMPPEQ6ZT21 453 aa5.96□□□□□ -1.46
SDCBP-208ENST00000520228 NET1Q7Z628 596 aaPredicted RBP5.96□□□□□ -1.46
SDCBP-208ENST00000520228 LUZP2Q86TE4 346 aa5.96□□□□□ -1.46
SDCBP-208ENST00000520228 SLC30A8Q8IWU4 369 aa5.96□□□□□ -1.46
SDCBP-208ENST00000520228 CADM2Q8N3J6 435 aa5.96□□□□□ -1.46
SDCBP-208ENST00000520228 SLC35B4Q969S0 331 aa5.96□□□□□ -1.46
SDCBP-208ENST00000520228 RCN3Q96D15 328 aa5.96□□□□□ -1.46
SDCBP-208ENST00000520228 GMPPAQ96IJ6 420 aaPredicted RBP5.96□□□□□ -1.46
SDCBP-208ENST00000520228 SGK494Q96LW2 274 aa5.96□□□□□ -1.46
SDCBP-208ENST00000520228 UHRF2Q96PU4 802 aa5.96□□□□□ -1.46
SDCBP-208ENST00000520228 RBM24Q9BX46 236 aaKnown RBP5.96□□□□□ -1.46
SDCBP-208ENST00000520228 SRXN1Q9BYN0 137 aa5.96□□□□□ -1.46
SDCBP-208ENST00000520228 COQ10BQ9H8M1 238 aa5.96□□□□□ -1.46
SDCBP-208ENST00000520228 GLRX2Q9NS18 164 aa5.96□□□□□ -1.46
SDCBP-208ENST00000520228 FAM118AQ9NWS6 357 aa5.96□□□□□ -1.46
SDCBP-208ENST00000520228 KLHL28Q9NXS3 571 aa5.96□□□□□ -1.46
SDCBP-208ENST00000520228 OSGIN1Q9UJX0 560 aa5.96□□□□□ -1.46
SDCBP-208ENST00000520228 CLEC4AQ9UMR7 237 aa5.96□□□□□ -1.46
SDCBP-208ENST00000520228 TMED7Q9Y3B3 224 aa5.96□□□□□ -1.46
SDCBP-208ENST00000520228 HDGFL3Q9Y3E1 203 aa5.96□□□□□ -1.46
SDCBP-208ENST00000520228 MYO7BQ6PIF6 2116 aa5.96□□□□□ -1.46
SDCBP-208ENST00000520228 CROCCQ5TZA2 2017 aa5.96□□□□□ -1.46
SDCBP-208ENST00000520228 CELSR2Q9HCU4 2923 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 NINQ8N4C6 2090 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 IGHV3-15A0A0B4J1V0 119 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 M0QX08 132 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 AIM2O14862 343 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 ZNF208O43345 1280 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 TPST1O60507 370 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 SS18L1O75177 396 aaPredicted RBP5.95□□□□□ -1.46
SDCBP-208ENST00000520228 MFN2O95140 757 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 CGAP01215 116 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 OR2T7P0C7T2 308 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 GZMMP51124 257 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 OR2B6P58173 313 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 HOXC5Q00444 222 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 DMTNQ08495 405 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 GUSBP1Q15486 140 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 KRTAP24-1Q3LI83 254 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 C9orf152Q5JTZ5 239 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 FCRLAQ7L513 359 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 CALHM3Q86XJ0 350 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 SLC43A2Q8N370 569 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 SMYD1Q8NB12 490 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 OR2T12Q8NG77 320 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 OR6K3Q8NGY3 331 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 RNF128Q8TEB7 428 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 ABHD3Q8WU67 409 aa5.95□□□□□ -1.46
SDCBP-208ENST00000520228 DDIT4LQ96D03 193 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms