RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 MXRA7P84157 204 aa7.97□□□□□ -1.13
HDAC3-215ENST00000519474 SPIBQ01892 262 aa7.97□□□□□ -1.13
HDAC3-215ENST00000519474 KRR1Q13601 381 aaKnown RBP7.97□□□□□ -1.13
HDAC3-215ENST00000519474 TRIM25Q14258 630 aaKnown RBP7.97□□□□□ -1.13
HDAC3-215ENST00000519474 KCNMB1Q16558 191 aa7.97□□□□□ -1.13
HDAC3-215ENST00000519474 RSPO1Q2MKA7 263 aaPredicted RBP7.97□□□□□ -1.13
HDAC3-215ENST00000519474 ZNF362Q5T0B9 420 aaPredicted RBP7.97□□□□□ -1.13
HDAC3-215ENST00000519474 MBNL2Q5VZF2 373 aaKnown RBP7.97□□□□□ -1.13
HDAC3-215ENST00000519474 SMARCD3Q6STE5 483 aa7.97□□□□□ -1.13
HDAC3-215ENST00000519474 CYP2R1Q6VVX0 501 aa7.97□□□□□ -1.13
HDAC3-215ENST00000519474 OR6V1Q8N148 313 aa7.97□□□□□ -1.13
HDAC3-215ENST00000519474 ICA1LQ8NDH6 482 aa7.97□□□□□ -1.13
HDAC3-215ENST00000519474 KLF14Q8TD94 323 aaPredicted RBP7.97□□□□□ -1.13
HDAC3-215ENST00000519474 GNPDA2Q8TDQ7 276 aa7.97□□□□□ -1.13
HDAC3-215ENST00000519474 GTF3AQ92664 365 aaKnown RBP7.97□□□□□ -1.13
HDAC3-215ENST00000519474 MCUR1Q96AQ8 359 aa7.97□□□□□ -1.13
HDAC3-215ENST00000519474 SAMD8Q96LT4 415 aa7.97□□□□□ -1.13
HDAC3-215ENST00000519474 ERMAPQ96PL5 475 aaPredicted RBP7.97□□□□□ -1.13
HDAC3-215ENST00000519474 OR2J1Q9GZK6 312 aa7.97□□□□□ -1.13
HDAC3-215ENST00000519474 SYT4Q9H2B2 425 aa7.97□□□□□ -1.13
HDAC3-215ENST00000519474 OR52D1Q9H346 318 aa7.97□□□□□ -1.13
HDAC3-215ENST00000519474 RERGLQ9H628 205 aa7.97□□□□□ -1.13
HDAC3-215ENST00000519474 NDE1Q9NXR1 346 aa7.97□□□□□ -1.13
HDAC3-215ENST00000519474 TAS2R1Q9NYW7 299 aa7.97□□□□□ -1.13
HDAC3-215ENST00000519474 GPR160Q9UJ42 338 aa7.97□□□□□ -1.13
HDAC3-215ENST00000519474 STARD10Q9Y365 291 aa7.97□□□□□ -1.13
HDAC3-215ENST00000519474 MALRD1Q5VYJ5 2156 aa7.97□□□□□ -1.13
HDAC3-215ENST00000519474 A0A1W2PPW3 197 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 OR10H3O60404 316 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 ICMTO60725 284 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 RP2O75695 350 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 KRT36O76013 467 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 PPP1R3DO95685 299 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 OPN1MWP04001 364 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 OPN1MW2P0DN77 364 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 OPN1MW3P0DN78 364 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 HIST1H1CP16403 213 aaKnown RBP7.96□□□□□ -1.14
HDAC3-215ENST00000519474 ATP6V1B2P21281 511 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 ACHEP22303 614 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 FPR3P25089 353 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 CRYBB2P43320 205 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 MMP15P51511 669 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 CHN2P52757 468 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 PPP1CBP62140 327 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 HIST1H3AP68431 136 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 MRPS11P82912 194 aaKnown RBP7.96□□□□□ -1.14
HDAC3-215ENST00000519474 PPP1R8Q12972 351 aaKnown RBP7.96□□□□□ -1.14
HDAC3-215ENST00000519474 TSPAN31Q12999 210 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 PSG7Q13046 419 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 NKPD1Q17RQ9 610 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 CHRFAM7AQ494W8 412 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 SPRNQ5BIV9 151 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 SPATA46Q5T0L3 261 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 HIST2H3PS2Q5TEC6 136 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 FAM166AQ6J272 317 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 HIST2H3AQ71DI3 136 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 VASH1Q7L8A9 365 aaPredicted RBP7.96□□□□□ -1.14
HDAC3-215ENST00000519474 GLB1L2Q8IW92 636 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 C1orf174Q8IYL3 243 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 ARHGAP24Q8N264 748 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 CCDC197Q8NCU1 140 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 OR4C15Q8NGM1 316 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 OR4K13Q8NH42 304 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 HPS1Q92902 700 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 NMNAT3Q96T66 252 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 FAM192AQ9GZU8 254 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 IFT22Q9H7X7 185 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 CHODLQ9H9P2 273 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 ELOVL3Q9HB03 270 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 ZNF275Q9NSD4 429 aaPredicted RBP7.96□□□□□ -1.14
HDAC3-215ENST00000519474 LYVE1Q9Y5Y7 322 aa7.96□□□□□ -1.14
HDAC3-215ENST00000519474 NIPBLQ6KC79 2804 aaeCLIP7.95□□□□□ -1.14
HDAC3-215ENST00000519474 IGLV1-36A0A0B4J1U3 117 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 OR6C68A6NDL8 312 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 TNFRSF11BO00300 401 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 RER1O15258 196 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 SGCEO43556 437 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 CDC14BO60729 498 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 IGHV1-46P01743 117 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 TFP02787 698 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 HMGN1P05114 100 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 FAM157CP0CG43 387 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 CALB2P22676 271 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 IGFBP5P24593 272 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 CRABP1P29762 137 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 GCH1P30793 250 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 SLC6A6P31641 620 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 MAGEA2P43356 314 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 GPR6P46095 362 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-215ENST00000519474 ZNF81P51508 661 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 LMO4P61968 165 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 TSTQ16762 297 aaKnown RBP7.95□□□□□ -1.14
HDAC3-215ENST00000519474 MEP1BQ16820 701 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 IGSF11Q5DX21 431 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 SLC35F1Q5T1Q4 408 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 ZNF770Q6IQ21 691 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-215ENST00000519474 PGBD2Q6P3X8 592 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 TMEM154Q6P9G4 183 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 UNQ6126/PRO20091Q6UXV3 157 aa7.95□□□□□ -1.14
HDAC3-215ENST00000519474 ADCK1Q86TW2 530 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms