RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 ZNF770Q6IQ21 691 aaPredicted RBP16.08■□□□□ 0.16
CTNNA1-213ENST00000519113 ZNF730Q6ZMV8 503 aa16.08■□□□□ 0.16
CTNNA1-213ENST00000519113 WDR88Q6ZMY6 472 aa16.08■□□□□ 0.16
CTNNA1-213ENST00000519113 TSPYL5Q86VY4 417 aaPredicted RBP16.08■□□□□ 0.16
CTNNA1-213ENST00000519113 OR5J2Q8NH18 312 aa16.08■□□□□ 0.16
CTNNA1-213ENST00000519113 SLC7A13Q8TCU3 470 aa16.08■□□□□ 0.16
CTNNA1-213ENST00000519113 ADAMTS16Q8TE57 1224 aa16.08■□□□□ 0.16
CTNNA1-213ENST00000519113 SLC25A28Q96A46 364 aa16.08■□□□□ 0.16
CTNNA1-213ENST00000519113 APOL4Q9BPW4 351 aa16.08■□□□□ 0.16
CTNNA1-213ENST00000519113 TMEM43Q9BTV4 400 aa16.08■□□□□ 0.16
CTNNA1-213ENST00000519113 C1QTNF5Q9BXJ0 243 aa16.08■□□□□ 0.16
CTNNA1-213ENST00000519113 SLITRK2Q9H156 845 aa16.08■□□□□ 0.16
CTNNA1-213ENST00000519113 MAN2C1Q9NTJ4 1040 aa16.08■□□□□ 0.16
CTNNA1-213ENST00000519113 PLEK2Q9NYT0 353 aa16.08■□□□□ 0.16
CTNNA1-213ENST00000519113 MYRFQ9Y2G1 1151 aa16.08■□□□□ 0.16
CTNNA1-213ENST00000519113 PCDHGB5Q9Y5G0 923 aa16.08■□□□□ 0.16
CTNNA1-213ENST00000519113 GMPPBQ9Y5P6 360 aa16.08■□□□□ 0.16
CTNNA1-213ENST00000519113 A0A0B4J2E0 115 aa16.07■□□□□ 0.16
CTNNA1-213ENST00000519113 A0A1B0GX12 115 aa16.07■□□□□ 0.16
CTNNA1-213ENST00000519113 C11orf98E9PRG8 122 aa16.07■□□□□ 0.16
CTNNA1-213ENST00000519113 POLR2IP36954 125 aaKnown RBP16.07■□□□□ 0.16
CTNNA1-213ENST00000519113 GLO1Q04760 184 aa16.07■□□□□ 0.16
CTNNA1-213ENST00000519113 BLMHQ13867 455 aa16.07■□□□□ 0.16
CTNNA1-213ENST00000519113 ZNF691Q5VV52 312 aa16.07■□□□□ 0.16
CTNNA1-213ENST00000519113 PGBD2Q6P3X8 592 aa16.07■□□□□ 0.16
CTNNA1-213ENST00000519113 LRFN4Q6PJG9 635 aa16.07■□□□□ 0.16
CTNNA1-213ENST00000519113 SLC35D2Q76EJ3 337 aa16.07■□□□□ 0.16
CTNNA1-213ENST00000519113 PARP8Q8N3A8 854 aa16.07■□□□□ 0.16
CTNNA1-213ENST00000519113 OR4K5Q8NGD3 323 aa16.07■□□□□ 0.16
CTNNA1-213ENST00000519113 GNPDA2Q8TDQ7 276 aa16.07■□□□□ 0.16
CTNNA1-213ENST00000519113 GTF3AQ92664 365 aaKnown RBP16.07■□□□□ 0.16
CTNNA1-213ENST00000519113 ZNF566Q969W8 418 aa16.07■□□□□ 0.16
CTNNA1-213ENST00000519113 DGCR6LQ9BY27 220 aa16.07■□□□□ 0.16
CTNNA1-213ENST00000519113 YTHDF1Q9BYJ9 559 aaKnown RBP16.07■□□□□ 0.16
CTNNA1-213ENST00000519113 EGLN1Q9GZT9 426 aa16.07■□□□□ 0.16
CTNNA1-213ENST00000519113 KRCC1Q9NPI7 259 aaPredicted RBP16.07■□□□□ 0.16
CTNNA1-213ENST00000519113 BATF3Q9NR55 127 aa16.07■□□□□ 0.16
CTNNA1-213ENST00000519113 PLSCR5A0PG75 271 aa16.06■□□□□ 0.16
CTNNA1-213ENST00000519113 LRRN3E7EW58 273 aa16.06■□□□□ 0.16
CTNNA1-213ENST00000519113 DHHO43323 396 aa16.06■□□□□ 0.16
CTNNA1-213ENST00000519113 RNASE1P07998 156 aaKnown RBP16.06■□□□□ 0.16
CTNNA1-213ENST00000519113 MAKP20794 623 aa16.06■□□□□ 0.16
CTNNA1-213ENST00000519113 ESRRGP62508 458 aa16.06■□□□□ 0.16
CTNNA1-213ENST00000519113 NRN1LQ496H8 165 aa16.06■□□□□ 0.16
CTNNA1-213ENST00000519113 ZNF613Q6PF04 617 aa16.06■□□□□ 0.16
CTNNA1-213ENST00000519113 SLC16A14Q7RTX9 510 aa16.06■□□□□ 0.16
CTNNA1-213ENST00000519113 DEFB108BQ8NET1 73 aa16.06■□□□□ 0.16
CTNNA1-213ENST00000519113 OR1J1Q8NGS3 322 aa16.06■□□□□ 0.16
CTNNA1-213ENST00000519113 ACOT11Q8WXI4 607 aaPredicted RBP16.06■□□□□ 0.16
CTNNA1-213ENST00000519113 SLC25A44Q96H78 314 aaPredicted RBP16.06■□□□□ 0.16
CTNNA1-213ENST00000519113 ZNF69Q9UC07 566 aa16.06■□□□□ 0.16
CTNNA1-213ENST00000519113 PURGQ9UJV8 347 aaKnown RBP16.06■□□□□ 0.16
CTNNA1-213ENST00000519113 SLC7A7Q9UM01 511 aa16.06■□□□□ 0.16
CTNNA1-213ENST00000519113 AUP1Q9Y679 476 aa16.06■□□□□ 0.16
CTNNA1-213ENST00000519113 HSPE1-MOB4S4R3N1 261 aa16.06■□□□□ 0.16
CTNNA1-213ENST00000519113 A0A087WUU8 490 aa16.05■□□□□ 0.16
CTNNA1-213ENST00000519113 CLDN34H7C241 214 aa16.05■□□□□ 0.16
CTNNA1-213ENST00000519113 SPRY3O43610 288 aa16.05■□□□□ 0.16
CTNNA1-213ENST00000519113 IGHV1-46P01743 117 aa16.05■□□□□ 0.16
CTNNA1-213ENST00000519113 GSTM3P21266 225 aa16.05■□□□□ 0.16
CTNNA1-213ENST00000519113 ZFP36P26651 326 aaKnown RBP16.05■□□□□ 0.16
CTNNA1-213ENST00000519113 GCH1P30793 250 aa16.05■□□□□ 0.16
CTNNA1-213ENST00000519113 APLNRP35414 380 aa16.05■□□□□ 0.16
CTNNA1-213ENST00000519113 IL5RAQ01344 420 aa16.05■□□□□ 0.16
CTNNA1-213ENST00000519113 COX10Q12887 443 aa16.05■□□□□ 0.16
CTNNA1-213ENST00000519113 ZNF718Q3SXZ3 478 aa16.05■□□□□ 0.16
CTNNA1-213ENST00000519113 C1orf94Q6P1W5 598 aa16.05■□□□□ 0.16
CTNNA1-213ENST00000519113 PITX2Q99697 317 aa16.05■□□□□ 0.16
CTNNA1-213ENST00000519113 CYSLTR2Q9NS75 346 aa16.05■□□□□ 0.16
CTNNA1-213ENST00000519113 NDRG4Q9ULP0 352 aaKnown RBP16.05■□□□□ 0.16
CTNNA1-213ENST00000519113 QDPRP09417 244 aa16.04■□□□□ 0.16
CTNNA1-213ENST00000519113 OSMP13725 252 aa16.04■□□□□ 0.16
CTNNA1-213ENST00000519113 LIPAP38571 399 aa16.04■□□□□ 0.16
CTNNA1-213ENST00000519113 ZNF154Q13106 437 aa16.04■□□□□ 0.16
CTNNA1-213ENST00000519113 TOP3AQ13472 1001 aaPredicted RBP16.04■□□□□ 0.16
CTNNA1-213ENST00000519113 OCLNQ16625 522 aa16.04■□□□□ 0.16
CTNNA1-213ENST00000519113 UNQ6126/PRO20091Q6UXV3 157 aa16.04■□□□□ 0.16
CTNNA1-213ENST00000519113 CD300LDQ6UXZ3 194 aa16.04■□□□□ 0.16
CTNNA1-213ENST00000519113 MBOAT2Q6ZWT7 520 aa16.04■□□□□ 0.16
CTNNA1-213ENST00000519113 ZER1Q7Z7L7 766 aa16.04■□□□□ 0.16
CTNNA1-213ENST00000519113 NKAIN4Q8IVV8 208 aa16.04■□□□□ 0.16
CTNNA1-213ENST00000519113 C1orf147Q96MC9 270 aaPredicted RBP16.04■□□□□ 0.16
CTNNA1-213ENST00000519113 MRI1Q9BV20 369 aa16.04■□□□□ 0.16
CTNNA1-213ENST00000519113 EIF3KQ9UBQ5 218 aaKnown RBP16.04■□□□□ 0.16
CTNNA1-213ENST00000519113 RNF13O43567 381 aa16.03■□□□□ 0.16
CTNNA1-213ENST00000519113 IGHMP01871 453 aa16.03■□□□□ 0.16
CTNNA1-213ENST00000519113 THY1P04216 161 aa16.03■□□□□ 0.16
CTNNA1-213ENST00000519113 CCNOP22674 350 aa16.03■□□□□ 0.16
CTNNA1-213ENST00000519113 GGT2P36268 569 aa16.03■□□□□ 0.16
CTNNA1-213ENST00000519113 MMP15P51511 669 aa16.03■□□□□ 0.16
CTNNA1-213ENST00000519113 ZNF84P51523 738 aa16.03■□□□□ 0.16
CTNNA1-213ENST00000519113 CRISP1P54107 249 aa16.03■□□□□ 0.16
CTNNA1-213ENST00000519113 HSF2Q03933 536 aa16.03■□□□□ 0.16
CTNNA1-213ENST00000519113 KCTD21Q4G0X4 260 aa16.03■□□□□ 0.16
CTNNA1-213ENST00000519113 RBM48Q5RL73 367 aaKnown RBP16.03■□□□□ 0.16
CTNNA1-213ENST00000519113 RNF113BQ8IZP6 322 aaKnown RBP16.03■□□□□ 0.16
CTNNA1-213ENST00000519113 BCL6BQ8N143 479 aaPredicted RBP16.03■□□□□ 0.16
CTNNA1-213ENST00000519113 HRASLS5Q96KN8 279 aa16.03■□□□□ 0.16
CTNNA1-213ENST00000519113 KCNN2Q9H2S1 579 aa16.03■□□□□ 0.16
CTNNA1-213ENST00000519113 MMP26Q9NRE1 261 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms