RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 OR10C1Q96KK4 312 aa2.55□□□□□ -2
SQLE-202ENST00000518604 ZYG11BQ9C0D3 744 aa2.55□□□□□ -2
SQLE-202ENST00000518604 GEMIN7Q9H840 131 aaKnown RBP2.55□□□□□ -2
SQLE-202ENST00000518604 DCAF16Q9NXF7 216 aa2.55□□□□□ -2
SQLE-202ENST00000518604 IGLV2-18A0A075B6J9 118 aa2.54□□□□□ -2
SQLE-202ENST00000518604 SERPINE3A8MV23 424 aa2.54□□□□□ -2
SQLE-202ENST00000518604 SGK1O00141 431 aa2.54□□□□□ -2
SQLE-202ENST00000518604 EIF3HO15372 352 aaKnown RBP eCLIP2.54□□□□□ -2
SQLE-202ENST00000518604 SOCS1O15524 211 aa2.54□□□□□ -2
SQLE-202ENST00000518604 RBBP9O75884 186 aa2.54□□□□□ -2
SQLE-202ENST00000518604 RCBTB2O95199 551 aa2.54□□□□□ -2
SQLE-202ENST00000518604 POLR2MP0CAP2 368 aa2.54□□□□□ -2
SQLE-202ENST00000518604 ZNF286BP0CG31 522 aa2.54□□□□□ -2
SQLE-202ENST00000518604 OPRK1P41145 380 aa2.54□□□□□ -2
SQLE-202ENST00000518604 UQCRFS1P47985 274 aa2.54□□□□□ -2
SQLE-202ENST00000518604 RAB9AP51151 201 aa2.54□□□□□ -2
SQLE-202ENST00000518604 PRRX1P54821 245 aa2.54□□□□□ -2
SQLE-202ENST00000518604 SEMG2Q02383 582 aa2.54□□□□□ -2
SQLE-202ENST00000518604 CUL2Q13617 745 aa2.54□□□□□ -2
SQLE-202ENST00000518604 ALKBH6Q3KRA9 238 aa2.54□□□□□ -2
SQLE-202ENST00000518604 ZNF880Q6PDB4 577 aa2.54□□□□□ -2
SQLE-202ENST00000518604 MBOAT2Q6ZWT7 520 aa2.54□□□□□ -2
SQLE-202ENST00000518604 MRPL55Q7Z7F7 128 aaKnown RBP2.54□□□□□ -2
SQLE-202ENST00000518604 CDKL3Q8IVW4 592 aaPredicted RBP2.54□□□□□ -2
SQLE-202ENST00000518604 ZNF615Q8N8J6 731 aa2.54□□□□□ -2
SQLE-202ENST00000518604 COX18Q8N8Q8 333 aa2.54□□□□□ -2
SQLE-202ENST00000518604 ZFP41Q8N8Y5 198 aa2.54□□□□□ -2
SQLE-202ENST00000518604 TTC29Q8NA56 475 aaPredicted RBP2.54□□□□□ -2
SQLE-202ENST00000518604 OR52E2Q8NGJ4 325 aa2.54□□□□□ -2
SQLE-202ENST00000518604 OR9G4Q8NGQ1 327 aa2.54□□□□□ -2
SQLE-202ENST00000518604 PTX4Q96A99 478 aa2.54□□□□□ -2
SQLE-202ENST00000518604 FLYWCH2Q96CP2 140 aaKnown RBP2.54□□□□□ -2
SQLE-202ENST00000518604 DOK1Q99704 481 aa2.54□□□□□ -2
SQLE-202ENST00000518604 HSD17B10Q99714 261 aaKnown RBP2.54□□□□□ -2
SQLE-202ENST00000518604 FHOD3Q2V2M9 1422 aa2.53□□□□□ -2
SQLE-202ENST00000518604 PALLDQ8WX93 1383 aa2.53□□□□□ -2
SQLE-202ENST00000518604 KBTBD11-OT1A0A1B0GTJ5 212 aa2.53□□□□□ -2
SQLE-202ENST00000518604 C7orf66A4D0T2 115 aa2.53□□□□□ -2
SQLE-202ENST00000518604 DNASE2O00115 360 aaPredicted RBP2.53□□□□□ -2
SQLE-202ENST00000518604 RDH16O75452 317 aa2.53□□□□□ -2
SQLE-202ENST00000518604 FLOT1O75955 427 aa2.53□□□□□ -2
SQLE-202ENST00000518604 EIF4EP06730 217 aaKnown RBP2.53□□□□□ -2
SQLE-202ENST00000518604 STOMP27105 288 aa2.53□□□□□ -2
SQLE-202ENST00000518604 HMOX2P30519 316 aa2.53□□□□□ -2
SQLE-202ENST00000518604 TNFSF9P41273 254 aa2.53□□□□□ -2
SQLE-202ENST00000518604 CXCL12P48061 93 aa2.53□□□□□ -2
SQLE-202ENST00000518604 CRISP1P54107 249 aa2.53□□□□□ -2
SQLE-202ENST00000518604 RCAN2Q14206 197 aa2.53□□□□□ -2
SQLE-202ENST00000518604 TPTE2P1Q5T6R2 138 aa2.53□□□□□ -2
SQLE-202ENST00000518604 C1orf185Q5T7R7 199 aa2.53□□□□□ -2
SQLE-202ENST00000518604 AP1ARQ63HQ0 302 aa2.53□□□□□ -2
SQLE-202ENST00000518604 IGFL1Q6UW32 110 aa2.53□□□□□ -2
SQLE-202ENST00000518604 TMEM205Q6UW68 189 aa2.53□□□□□ -2
SQLE-202ENST00000518604 SNX20Q7Z614 316 aa2.53□□□□□ -2
SQLE-202ENST00000518604 HMGN2P46Q86SG4 172 aa2.53□□□□□ -2
SQLE-202ENST00000518604 CBR4Q8N4T8 237 aa2.53□□□□□ -2
SQLE-202ENST00000518604 ZNF709Q8N972 641 aa2.53□□□□□ -2
SQLE-202ENST00000518604 NECAP1Q8NC96 275 aa2.53□□□□□ -2
SQLE-202ENST00000518604 OR4K5Q8NGD3 323 aa2.53□□□□□ -2
SQLE-202ENST00000518604 OR10AD1Q8NGE0 317 aa2.53□□□□□ -2
SQLE-202ENST00000518604 OR6Q1Q8NGQ2 317 aa2.53□□□□□ -2
SQLE-202ENST00000518604 LILRB4Q8NHJ6 448 aa2.53□□□□□ -2
SQLE-202ENST00000518604 APH1BQ8WW43 257 aa2.53□□□□□ -2
SQLE-202ENST00000518604 NRGNQ92686 78 aa2.53□□□□□ -2
SQLE-202ENST00000518604 ACTR3CQ9C0K3 210 aaPredicted RBP2.53□□□□□ -2
SQLE-202ENST00000518604 EXO5Q9H790 373 aa2.53□□□□□ -2
SQLE-202ENST00000518604 C20orf96Q9NUD7 363 aaPredicted RBP2.53□□□□□ -2
SQLE-202ENST00000518604 GCNT4Q9P109 453 aa2.53□□□□□ -2
SQLE-202ENST00000518604 CLN8Q9UBY8 286 aa2.53□□□□□ -2
SQLE-202ENST00000518604 ZNF835Q9Y2P0 537 aa2.53□□□□□ -2
SQLE-202ENST00000518604 SAR1BQ9Y6B6 198 aa2.53□□□□□ -2
SQLE-202ENST00000518604 AHDC1Q5TGY3 1603 aaPredicted RBP2.53□□□□□ -2
SQLE-202ENST00000518604 KCNE1BA0A087WTH5 132 aa2.52□□□□□ -2.01
SQLE-202ENST00000518604 DNALI1O14645 258 aaPredicted RBP2.52□□□□□ -2.01
SQLE-202ENST00000518604 CACNG3O60359 315 aa2.52□□□□□ -2.01
SQLE-202ENST00000518604 HMMRO75330 724 aa2.52□□□□□ -2.01
SQLE-202ENST00000518604 REM1O75628 298 aa2.52□□□□□ -2.01
SQLE-202ENST00000518604 CCNB2O95067 398 aa2.52□□□□□ -2.01
SQLE-202ENST00000518604 MPZL1O95297 269 aa2.52□□□□□ -2.01
SQLE-202ENST00000518604 LSM8O95777 96 aaKnown RBP2.52□□□□□ -2.01
SQLE-202ENST00000518604 CD74P04233 296 aa2.52□□□□□ -2.01
SQLE-202ENST00000518604 ERCC1P07992 297 aaPredicted RBP2.52□□□□□ -2.01
SQLE-202ENST00000518604 ZNF688P0C7X2 276 aa2.52□□□□□ -2.01
SQLE-202ENST00000518604 OR1E1P30953 314 aa2.52□□□□□ -2.01
SQLE-202ENST00000518604 CCNA1P78396 465 aa2.52□□□□□ -2.01
SQLE-202ENST00000518604 STUMQ69YW2 141 aa2.52□□□□□ -2.01
SQLE-202ENST00000518604 TWF2Q6IBS0 349 aaKnown RBP2.52□□□□□ -2.01
SQLE-202ENST00000518604 H3F3CQ6NXT2 135 aa2.52□□□□□ -2.01
SQLE-202ENST00000518604 TMEM220Q6QAJ8 160 aa2.52□□□□□ -2.01
SQLE-202ENST00000518604 EIF3MQ7L2H7 374 aaKnown RBP2.52□□□□□ -2.01
SQLE-202ENST00000518604 SLC16A13Q7RTY0 426 aa2.52□□□□□ -2.01
SQLE-202ENST00000518604 NEGR1Q7Z3B1 354 aa2.52□□□□□ -2.01
SQLE-202ENST00000518604 LGI3Q8N145 548 aa2.52□□□□□ -2.01
SQLE-202ENST00000518604 LYPD1Q8N2G4 141 aa2.52□□□□□ -2.01
SQLE-202ENST00000518604 RNF182Q8N6D2 247 aa2.52□□□□□ -2.01
SQLE-202ENST00000518604 GATSQ8NAP1 163 aa2.52□□□□□ -2.01
SQLE-202ENST00000518604 C11orf72Q8NBR9 251 aa2.52□□□□□ -2.01
SQLE-202ENST00000518604 OR11H7Q8NGC8 314 aa2.52□□□□□ -2.01
SQLE-202ENST00000518604 LRRC29Q8WV35 223 aa2.52□□□□□ -2.01
SQLE-202ENST00000518604 ESR2Q92731 530 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms