RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 SERPINB11Q96P15 392 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 SMIM14Q96QK8 99 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 IL4I1Q96RQ9 567 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 DUSP16Q9BY84 665 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 MRPS26Q9BYN8 205 aaKnown RBP2.55□□□□□ -2
VPS13B-207ENST00000518569 ULBP2Q9BZM5 246 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 GBA3Q9H227 469 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 IMP3Q9NV31 184 aaKnown RBP2.55□□□□□ -2
VPS13B-207ENST00000518569 UGGT1Q9NYU2 1555 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 PTTG3PQ9NZH4 202 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 ARHGAP23Q9P227 1491 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 KIF25Q9UIL4 384 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 RIMS3Q9UJD0 308 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 ANAPC7Q9UJX3 599 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 NPIPA1Q9UND3 350 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 GSTK1Q9Y2Q3 226 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 OBSCNQ5VST9 7968 aa2.55□□□□□ -2
VPS13B-207ENST00000518569 TIAM1Q13009 1591 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 RPAP1Q9BWH6 1393 aaPredicted RBP2.54□□□□□ -2
VPS13B-207ENST00000518569 A0A1W2PRF3 423 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 A0A1W2PRM7 423 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 FUOMA2VDF0 154 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 MKRN2OSH3BPM6 223 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 KLRC4-KLRK1H3BQV0 150 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 TEX46H3BTG2 121 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 KMOO15229 486 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 ATP8B1O43520 1251 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 ENTPD5O75356 428 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 ZMPSTE24O75844 475 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 LRATO95237 230 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 FARS2O95363 451 aaKnown RBP2.54□□□□□ -2
VPS13B-207ENST00000518569 SERPINA5P05154 406 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 SERPINE2P07093 398 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 CPN1P15169 458 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 NQO1P15559 274 aaKnown RBP2.54□□□□□ -2
VPS13B-207ENST00000518569 CD36P16671 472 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 ZNF7P17097 686 aaPredicted RBP2.54□□□□□ -2
VPS13B-207ENST00000518569 PSMC3P17980 439 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 PMCHP20382 165 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 PCMT1P22061 227 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 CD1CP29017 333 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 PRDX3P30048 256 aaKnown RBP2.54□□□□□ -2
VPS13B-207ENST00000518569 GCKP35557 465 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 ARR3P36575 388 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 RPL13AP40429 203 aaKnown RBP2.54□□□□□ -2
VPS13B-207ENST00000518569 SLCO1A2P46721 670 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 OR3A4PP47883 348 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 DNASE1L1P49184 302 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 CX3CR1P49238 355 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 LIM2P55344 173 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 WNT4P56705 351 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 NUP107P57740 925 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 OR2B6P58173 313 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 SPCS3P61009 180 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 ERVK-25P63136 954 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 LCN2P80188 198 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 ZNF45Q02386 682 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 IRF8Q02556 426 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 ZNF33AQ06730 810 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 CKAP4Q07065 602 aaKnown RBP2.54□□□□□ -2
VPS13B-207ENST00000518569 MADCAM1Q13477 382 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 ITIH4Q14624 930 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 LAGE3Q14657 143 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 PDK2Q15119 407 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 C5orf64Q2M2E5 130 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 ZCWPW2Q504Y3 356 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 SFT2D3Q587I9 215 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 PIGGQ5H8A4 983 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 IDNKQ5T6J7 187 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 HSDL2Q6YN16 418 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 HSD17B13Q7Z5P4 300 aaPredicted RBP2.54□□□□□ -2
VPS13B-207ENST00000518569 TMEM179BQ7Z7N9 219 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 SYS1Q8N2H4 156 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 C8orf31Q8N9H6 132 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 ACBD4Q8NC06 268 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 ATP6V1C2Q8NEY4 427 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 OR4D5Q8NGN0 318 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 OR10Z1Q8NGY1 313 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 OR6K2Q8NGY2 324 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 OR5AK3PQ8NH89 298 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 LGALS14Q8TCE9 139 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 GPR151Q8TDV0 419 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 AENQ8WTP8 325 aaKnown RBP2.54□□□□□ -2
VPS13B-207ENST00000518569 C22orf15Q8WYQ4 148 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 AP3S1Q92572 193 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 STMN2Q93045 179 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 CMTM5Q96DZ9 223 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 RMND5BQ96G75 393 aaPredicted RBP2.54□□□□□ -2
VPS13B-207ENST00000518569 IMMP1LQ96LU5 166 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 NOL4LQ96MY1 436 aaPredicted RBP2.54□□□□□ -2
VPS13B-207ENST00000518569 RILPQ96NA2 401 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 EBNA1BP2Q99848 306 aaKnown RBP2.54□□□□□ -2
VPS13B-207ENST00000518569 P2RY13Q9BPV8 354 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 MICU1Q9BPX6 476 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 UTP23Q9BRU9 249 aaKnown RBP2.54□□□□□ -2
VPS13B-207ENST00000518569 ZNF426Q9BUY5 554 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 SYT4Q9H2B2 425 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 OR51B5Q9H339 312 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 WDR54Q9H977 334 aa2.54□□□□□ -2
VPS13B-207ENST00000518569 PLGRKTQ9HBL7 147 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms