RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 FBXO16Q8IX29 292 aaPredicted RBP2.32□□□□□ -2.04
HERC4-215ENST00000515753 PIANPQ8IYJ0 282 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 ZNF100Q8IYN0 542 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 CMTM1Q8IZ96 169 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 MYOCDQ8IZQ8 938 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 RDH10Q8IZV5 341 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 ARHGAP18Q8N392 663 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 CADM2Q8N3J6 435 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 C11orf42Q8N5U0 333 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 OR4A15Q8NGL6 344 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 OR2G2Q8NGZ5 317 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 OR5K2Q8NHB8 316 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 PPTC7Q8NI37 304 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 SLC7A13Q8TCU3 470 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 CXorf40AQ8TE69 158 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 GTSF1Q8WW33 167 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 ESR2Q92731 530 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 MYDGFQ969H8 173 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 FGGYQ96C11 551 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 PGLYRP4Q96LB8 373 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 HIST1H4GQ99525 98 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 TMEM246Q9BRR3 403 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 OR52A5Q9H2C5 316 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 PIGUQ9H490 435 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 SIAEQ9HAT2 523 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 TREM1Q9NP99 234 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 DMAP1Q9NPF5 467 aaPredicted RBP2.32□□□□□ -2.04
HERC4-215ENST00000515753 EXD2Q9NVH0 621 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 KCNIP1Q9NZI2 227 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 DHRS4-AS1Q9P1J3 65 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 ZNF282Q9UDV7 671 aaPredicted RBP2.32□□□□□ -2.04
HERC4-215ENST00000515753 LGALS13Q9UHV8 139 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 CELA1Q9UNI1 258 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 NRCAMQ92823 1304 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 PLIN4Q96Q06 1357 aa2.32□□□□□ -2.04
HERC4-215ENST00000515753 ARAP2Q8WZ64 1704 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 LAMB1P07942 1786 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 IGHV1OR15-1A0A075B7D0 117 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 IGKV6D-21A0A0A0MT36 114 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 IGHV7-81A0A0B4J1V7 117 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 USP27XA6NNY8 438 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 LYRM9A8MSI8 78 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 E7EWF7 191 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 ZBTB5O15062 677 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 SCAMP2O15127 329 aaKnown RBP2.31□□□□□ -2.04
HERC4-215ENST00000515753 MBTPS2O43462 519 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 E2F6O75461 281 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 SCELO95171 688 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 RBMY1CP0DJD4 496 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 CTRB1P17538 263 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 VDAC1P21796 283 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 SLC2A5P22732 501 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 GABRR2P28476 465 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 CFHR2P36980 270 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 GPR1P46091 355 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 KCNJ3P48549 501 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 GSSP48637 474 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 SLC26A2P50443 739 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 TNNC1P63316 161 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 CD47Q08722 323 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 SIGLEC14Q08ET2 396 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 TRDNQ13061 729 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 SERTAD2Q14140 314 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 TRAM2Q15035 370 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 AANATQ16613 207 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 LRRC36Q1X8D7 754 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 SPECC1LQ69YQ0 1117 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 TIGD3Q6B0B8 471 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 CTRB2Q6GPI1 263 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 CGB2Q6NT52 195 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 ASCL4Q6XD76 172 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 SLC35D2Q76EJ3 337 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 SNX20Q7Z614 316 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 LHFPL3Q86UP9 236 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 SLC26A11Q86WA9 606 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 RBM45Q8IUH3 476 aaKnown RBP2.31□□□□□ -2.04
HERC4-215ENST00000515753 UBALD2Q8IYN6 164 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 ZNF557Q8N988 423 aaPredicted RBP2.31□□□□□ -2.04
HERC4-215ENST00000515753 ZNF740Q8NDX6 193 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 OR56A4Q8NGH8 313 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 CCDC26Q8TAB7 109 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 FGF11Q92914 225 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 SMARCD2Q92925 531 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 FAM131CQ96AQ9 280 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 CMTM7Q96FZ5 175 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 ITCHQ96J02 903 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 SIGLEC12Q96PQ1 595 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 OR5M11Q96RB7 305 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 MCCC1Q96RQ3 725 aaPredicted RBP2.31□□□□□ -2.04
HERC4-215ENST00000515753 ACBD6Q9BR61 282 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 PAXXQ9BUH6 204 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 RNF126Q9BV68 326 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 SLC7A5P2Q9GIP4 190 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 ACTR6Q9GZN1 396 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 RAB1BQ9H0U4 201 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 ISG20L2Q9H9L3 353 aaKnown RBP2.31□□□□□ -2.04
HERC4-215ENST00000515753 SPACA1Q9HBV2 294 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 MIEF1Q9NQG6 463 aa2.31□□□□□ -2.04
HERC4-215ENST00000515753 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.31□□□□□ -2.04
HERC4-215ENST00000515753 CD300AQ9UGN4 299 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms