RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 GUCY2DQ02846 1103 aa5.95□□□□□ -1.46
CLDND1-229ENST00000513988 MS4A18Q3C1V0 323 aa5.95□□□□□ -1.46
CLDND1-229ENST00000513988 ABCA11PQ4W5N1 156 aa5.95□□□□□ -1.46
CLDND1-229ENST00000513988 ATAD3BQ5T9A4 648 aa5.95□□□□□ -1.46
CLDND1-229ENST00000513988 PLBD1Q6P4A8 553 aa5.95□□□□□ -1.46
CLDND1-229ENST00000513988 LCNL1Q6ZST4 164 aa5.95□□□□□ -1.46
CLDND1-229ENST00000513988 LYPD6Q86Y78 171 aa5.95□□□□□ -1.46
CLDND1-229ENST00000513988 EGFL6Q8IUX8 553 aa5.95□□□□□ -1.46
CLDND1-229ENST00000513988 DYNAPQ8N1N2 210 aa5.95□□□□□ -1.46
CLDND1-229ENST00000513988 ADPRHL1Q8NDY3 354 aa5.95□□□□□ -1.46
CLDND1-229ENST00000513988 OR5AK3PQ8NH89 298 aa5.95□□□□□ -1.46
CLDND1-229ENST00000513988 SFXN5Q8TD22 340 aa5.95□□□□□ -1.46
CLDND1-229ENST00000513988 CDKL2Q92772 493 aa5.95□□□□□ -1.46
CLDND1-229ENST00000513988 EME1Q96AY2 570 aa5.95□□□□□ -1.46
CLDND1-229ENST00000513988 MOAP1Q96BY2 351 aa5.95□□□□□ -1.46
CLDND1-229ENST00000513988 AKR1E2Q96JD6 320 aa5.95□□□□□ -1.46
CLDND1-229ENST00000513988 CDRT15Q96T59 188 aa5.95□□□□□ -1.46
CLDND1-229ENST00000513988 BAG1Q99933 345 aaPredicted RBP5.95□□□□□ -1.46
CLDND1-229ENST00000513988 ECSITQ9BQ95 431 aa5.95□□□□□ -1.46
CLDND1-229ENST00000513988 MEAF6Q9HAF1 191 aa5.95□□□□□ -1.46
CLDND1-229ENST00000513988 ISYNA1Q9NPH2 558 aa5.95□□□□□ -1.46
CLDND1-229ENST00000513988 POLE3Q9NRF9 147 aa5.95□□□□□ -1.46
CLDND1-229ENST00000513988 NDE1Q9NXR1 346 aa5.95□□□□□ -1.46
CLDND1-229ENST00000513988 HMCN2Q8NDA2 5059 aa5.94□□□□□ -1.46
CLDND1-229ENST00000513988 A0A1W2PQ09 198 aa5.94□□□□□ -1.46
CLDND1-229ENST00000513988 NPIPB8E9PQR5 432 aa5.94□□□□□ -1.46
CLDND1-229ENST00000513988 OR2T1O43869 369 aa5.94□□□□□ -1.46
CLDND1-229ENST00000513988 DUX4L4P0CJ87 422 aa5.94□□□□□ -1.46
CLDND1-229ENST00000513988 RAC2P15153 192 aa5.94□□□□□ -1.46
CLDND1-229ENST00000513988 MATN1P21941 496 aa5.94□□□□□ -1.46
CLDND1-229ENST00000513988 ECHS1P30084 290 aa5.94□□□□□ -1.46
CLDND1-229ENST00000513988 MAGEA4P43358 317 aa5.94□□□□□ -1.46
CLDND1-229ENST00000513988 OR3A4PP47883 348 aa5.94□□□□□ -1.46
CLDND1-229ENST00000513988 ZNF84P51523 738 aa5.94□□□□□ -1.46
CLDND1-229ENST00000513988 PSG4Q00888 419 aa5.94□□□□□ -1.46
CLDND1-229ENST00000513988 PDIA2Q13087 525 aaKnown RBP5.94□□□□□ -1.46
CLDND1-229ENST00000513988 FAM69AQ5T7M9 428 aa5.94□□□□□ -1.46
CLDND1-229ENST00000513988 HHATQ5VTY9 493 aa5.94□□□□□ -1.46
CLDND1-229ENST00000513988 PRAMEF6Q5VXH4 476 aa5.94□□□□□ -1.46
CLDND1-229ENST00000513988 GPRIN3Q6ZVF9 776 aa5.94□□□□□ -1.46
CLDND1-229ENST00000513988 CCDC91Q7Z6B0 441 aa5.94□□□□□ -1.46
CLDND1-229ENST00000513988 LHFPL4Q7Z7J7 247 aa5.94□□□□□ -1.46
CLDND1-229ENST00000513988 FAM90A1Q86YD7 464 aa5.94□□□□□ -1.46
CLDND1-229ENST00000513988 NUDCD3Q8IVD9 361 aa5.94□□□□□ -1.46
CLDND1-229ENST00000513988 ZNF440Q8IYI8 595 aa5.94□□□□□ -1.46
CLDND1-229ENST00000513988 CLDN22Q8N7P3 220 aa5.94□□□□□ -1.46
CLDND1-229ENST00000513988 EPS8L3Q8TE67 593 aaKnown RBP5.94□□□□□ -1.46
CLDND1-229ENST00000513988 AENQ8WTP8 325 aaKnown RBP5.94□□□□□ -1.46
CLDND1-229ENST00000513988 PTP4A1Q93096 173 aa5.94□□□□□ -1.46
CLDND1-229ENST00000513988 TAAR8Q969N4 342 aa5.94□□□□□ -1.46
CLDND1-229ENST00000513988 MAGOHBQ96A72 148 aaKnown RBP5.94□□□□□ -1.46
CLDND1-229ENST00000513988 NABP1Q96AH0 204 aa5.94□□□□□ -1.46
CLDND1-229ENST00000513988 FOXRED1Q96CU9 486 aaPredicted RBP5.94□□□□□ -1.46
CLDND1-229ENST00000513988 ZNF582Q96NG8 517 aaPredicted RBP5.94□□□□□ -1.46
CLDND1-229ENST00000513988 DPY30Q9C005 99 aa5.94□□□□□ -1.46
CLDND1-229ENST00000513988 PRPF19Q9UMS4 504 aaKnown RBP5.94□□□□□ -1.46
CLDND1-229ENST00000513988 CAPN6Q9Y6Q1 641 aa5.94□□□□□ -1.46
CLDND1-229ENST00000513988 A0A087WUJ7 227 aa5.93□□□□□ -1.46
CLDND1-229ENST00000513988 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.93□□□□□ -1.46
CLDND1-229ENST00000513988 SLC28A1O00337 649 aa5.93□□□□□ -1.46
CLDND1-229ENST00000513988 DNALI1O14645 258 aaPredicted RBP5.93□□□□□ -1.46
CLDND1-229ENST00000513988 NDUFB3O43676 98 aa5.93□□□□□ -1.46
CLDND1-229ENST00000513988 KLHL2O95198 593 aa5.93□□□□□ -1.46
CLDND1-229ENST00000513988 GUSBP08236 651 aa5.93□□□□□ -1.46
CLDND1-229ENST00000513988 GKN3PP0CG01 181 aa5.93□□□□□ -1.46
CLDND1-229ENST00000513988 FPR3P25089 353 aa5.93□□□□□ -1.46
CLDND1-229ENST00000513988 SOAT1P35610 550 aa5.93□□□□□ -1.46
CLDND1-229ENST00000513988 HPCAP84074 193 aa5.93□□□□□ -1.46
CLDND1-229ENST00000513988 SLC7A5Q01650 507 aa5.93□□□□□ -1.46
CLDND1-229ENST00000513988 EGR4Q05215 589 aa5.93□□□□□ -1.46
CLDND1-229ENST00000513988 CLCQ05315 142 aa5.93□□□□□ -1.46
CLDND1-229ENST00000513988 PUDPQ08623 228 aa5.93□□□□□ -1.46
CLDND1-229ENST00000513988 IKZF1Q13422 519 aa5.93□□□□□ -1.46
CLDND1-229ENST00000513988 NAB1Q13506 487 aa5.93□□□□□ -1.46
CLDND1-229ENST00000513988 GNA13Q14344 377 aa5.93□□□□□ -1.46
CLDND1-229ENST00000513988 KIR2DS1Q14954 304 aa5.93□□□□□ -1.46
CLDND1-229ENST00000513988 MPPED2Q15777 294 aa5.93□□□□□ -1.46
CLDND1-229ENST00000513988 PDCD4Q53EL6 469 aaKnown RBP5.93□□□□□ -1.46
CLDND1-229ENST00000513988 C9orf152Q5JTZ5 239 aa5.93□□□□□ -1.46
CLDND1-229ENST00000513988 OR2T2Q6IF00 324 aa5.93□□□□□ -1.46
CLDND1-229ENST00000513988 ZNF770Q6IQ21 691 aaPredicted RBP5.93□□□□□ -1.46
CLDND1-229ENST00000513988 ZNF836Q6ZNA1 936 aa5.93□□□□□ -1.46
CLDND1-229ENST00000513988 SLC36A1Q7Z2H8 476 aa5.93□□□□□ -1.46
CLDND1-229ENST00000513988 NET1Q7Z628 596 aaPredicted RBP5.93□□□□□ -1.46
CLDND1-229ENST00000513988 Q8N1Y9 231 aa5.93□□□□□ -1.46
CLDND1-229ENST00000513988 C10orf111Q8N326 155 aa5.93□□□□□ -1.46
CLDND1-229ENST00000513988 CELF2-AS1Q8N7Q2 184 aa5.93□□□□□ -1.46
CLDND1-229ENST00000513988 BHLHE23Q8NDY6 225 aa5.93□□□□□ -1.46
CLDND1-229ENST00000513988 FBXO36Q8NEA4 188 aa5.93□□□□□ -1.46
CLDND1-229ENST00000513988 OR6Q1Q8NGQ2 317 aa5.93□□□□□ -1.46
CLDND1-229ENST00000513988 OR5P2Q8WZ92 322 aa5.93□□□□□ -1.46
CLDND1-229ENST00000513988 SLC38A4Q969I6 547 aa5.93□□□□□ -1.46
CLDND1-229ENST00000513988 ZNF566Q969W8 418 aa5.93□□□□□ -1.46
CLDND1-229ENST00000513988 CCDC115Q96NT0 180 aa5.93□□□□□ -1.46
CLDND1-229ENST00000513988 TSSK3Q96PN8 268 aa5.93□□□□□ -1.46
CLDND1-229ENST00000513988 CCL13Q99616 98 aa5.93□□□□□ -1.46
CLDND1-229ENST00000513988 CPPED1Q9BRF8 314 aaPredicted RBP5.93□□□□□ -1.46
CLDND1-229ENST00000513988 HEXA-AS1Q9H8Q6 139 aa5.93□□□□□ -1.46
CLDND1-229ENST00000513988 PRDM4Q9UKN5 801 aa5.93□□□□□ -1.46
CLDND1-229ENST00000513988 STARD10Q9Y365 291 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms