RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 DMRTC1Q5HYR2 192 aa8.69□□□□□ -1.02
VCAN-210ENST00000513960 MARCH3Q86UD3 253 aa8.69□□□□□ -1.02
VCAN-210ENST00000513960 FAM24BQ8N5W8 94 aa8.69□□□□□ -1.02
VCAN-210ENST00000513960 METTL27Q8N6F8 245 aaPredicted RBP8.69□□□□□ -1.02
VCAN-210ENST00000513960 SEMA6DQ8NFY4 1073 aa8.69□□□□□ -1.02
VCAN-210ENST00000513960 OR13C3Q8NGS6 347 aa8.69□□□□□ -1.02
VCAN-210ENST00000513960 CHRNA9Q9UGM1 479 aa8.69□□□□□ -1.02
VCAN-210ENST00000513960 KCNK7Q9Y2U2 307 aa8.69□□□□□ -1.02
VCAN-210ENST00000513960 B4DGG1 531 aa8.69□□□□□ -1.02
VCAN-210ENST00000513960 DCTN6O00399 190 aa8.69□□□□□ -1.02
VCAN-210ENST00000513960 CLDN4O14493 209 aa8.69□□□□□ -1.02
VCAN-210ENST00000513960 ADAP1O75689 374 aa8.69□□□□□ -1.02
VCAN-210ENST00000513960 LYPD3O95274 346 aa8.69□□□□□ -1.02
VCAN-210ENST00000513960 SMIM6P0DI80 62 aa8.69□□□□□ -1.02
VCAN-210ENST00000513960 RNH1P13489 461 aaKnown RBP8.69□□□□□ -1.02
VCAN-210ENST00000513960 ABOP16442 354 aa8.69□□□□□ -1.02
VCAN-210ENST00000513960 ADH6P28332 368 aa8.69□□□□□ -1.02
VCAN-210ENST00000513960 LYG2Q86SG7 212 aa8.69□□□□□ -1.02
VCAN-210ENST00000513960 NPEPL1Q8NDH3 523 aa8.69□□□□□ -1.02
VCAN-210ENST00000513960 OR5AP2Q8NGF4 316 aa8.69□□□□□ -1.02
VCAN-210ENST00000513960 OR13C9Q8NGT0 318 aa8.69□□□□□ -1.02
VCAN-210ENST00000513960 MARCH1Q8TCQ1 289 aa8.69□□□□□ -1.02
VCAN-210ENST00000513960 SECTM1Q8WVN6 248 aa8.69□□□□□ -1.02
VCAN-210ENST00000513960 CTHRC1Q96CG8 243 aa8.69□□□□□ -1.02
VCAN-210ENST00000513960 TMEM41AQ96HV5 264 aa8.69□□□□□ -1.02
VCAN-210ENST00000513960 INTS14Q96SY0 518 aa8.69□□□□□ -1.02
VCAN-210ENST00000513960 Q9N2J8 555 aa8.69□□□□□ -1.02
VCAN-210ENST00000513960 ASH2LQ9UBL3 628 aa8.69□□□□□ -1.02
VCAN-210ENST00000513960 TSPAN15O95858 294 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 KNG1P01042 644 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 THEGLP0DJG4 465 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 GABRG2P18507 467 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 HRH1P35367 487 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 PMPCAQ10713 525 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 ARFRP1Q13795 201 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 DHRS7BQ6IAN0 325 aaPredicted RBP8.68□□□□□ -1.02
VCAN-210ENST00000513960 DPY19L2P2Q6ZN68 376 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 FJX1Q86VR8 437 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.68□□□□□ -1.02
VCAN-210ENST00000513960 ZNF565Q8N9K5 539 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 CLEC1AQ8NC01 280 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 DGAT2Q96PD7 388 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 PRRT1Q99946 306 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 NRIP2Q9BQI9 281 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 LAT2Q9GZY6 243 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 FAM60AQ9NP50 221 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 CLEC1BQ9P126 229 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 VSIG4Q9Y279 399 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.68□□□□□ -1.02
VCAN-210ENST00000513960 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.68□□□□□ -1.02
VCAN-210ENST00000513960 NME2P1O60361 137 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 CELA2BP08218 269 aaPredicted RBP8.68□□□□□ -1.02
VCAN-210ENST00000513960 FOSL1P15407 271 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 PSG6Q00889 435 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 ERV3-1Q14264 604 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 RAB30Q15771 203 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 WDR38Q5JTN6 314 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 ACER2Q5QJU3 275 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 ZNF704Q6ZNC4 412 aaPredicted RBP8.68□□□□□ -1.02
VCAN-210ENST00000513960 DGAT2L6Q6ZPD8 337 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 SLC16A9Q7RTY1 509 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 ADAD2Q8NCV1 583 aaKnown RBP8.68□□□□□ -1.02
VCAN-210ENST00000513960 SEH1LQ96EE3 360 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 NAA11Q9BSU3 229 aaPredicted RBP8.68□□□□□ -1.02
VCAN-210ENST00000513960 S1PR5Q9H228 398 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 C8orf33Q9H7E9 229 aaPredicted RBP8.68□□□□□ -1.02
VCAN-210ENST00000513960 ELL3Q9HB65 397 aaPredicted RBP8.68□□□□□ -1.02
VCAN-210ENST00000513960 EPHA6Q9UF33 1036 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 TRANK1O15050 2925 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 MEX3AA1L020 520 aaKnown RBP8.68□□□□□ -1.02
VCAN-210ENST00000513960 TMEM212A6NML5 194 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 BLKP51451 505 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 NDUFA6P56556 154 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 MOGAT2Q3SYC2 334 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 UNQ9370/PRO34162Q6UXP9 181 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 Q6ZRG5 221 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 OR51A2Q8NGJ7 313 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 METTL21AQ8WXB1 218 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 SPACA5Q96QH8 159 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 G6PC3Q9BUM1 346 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 BARX1Q9HBU1 254 aaPredicted RBP8.68□□□□□ -1.02
VCAN-210ENST00000513960 SPACA1Q9HBV2 294 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 MMP26Q9NRE1 261 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 PRTFDC1Q9NRG1 225 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 CYP8B1Q9UNU6 501 aa8.68□□□□□ -1.02
VCAN-210ENST00000513960 LSM5Q9Y4Y9 91 aaKnown RBP8.68□□□□□ -1.02
VCAN-210ENST00000513960 PUS1Q9Y606 427 aaKnown RBP eCLIP8.68□□□□□ -1.02
VCAN-210ENST00000513960 TICRRQ7Z2Z1 1910 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 H7C1Q1 480 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 IFI6P09912 130 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 RCC1P18754 421 aaPredicted RBP8.67□□□□□ -1.02
VCAN-210ENST00000513960 CD96P40200 585 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 FAM53BQ14153 422 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 EIF5AL1Q6IS14 154 aaKnown RBP8.67□□□□□ -1.02
VCAN-210ENST00000513960 COX15Q7KZN9 410 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 MDGA2Q7Z553 956 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 SLC22A18ASQ8N1D0 253 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 AVL9Q8NBF6 648 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 FAM174AQ8TBP5 190 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 PHYHIPLQ96FC7 376 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms