RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 CPEB3Q8NE35 698 aaKnown RBP7.05□□□□□ -1.28
NEDD4-210ENST00000513957 PROKR2Q8NFJ6 384 aa7.05□□□□□ -1.28
NEDD4-210ENST00000513957 OR4Q3Q8NH05 313 aa7.05□□□□□ -1.28
NEDD4-210ENST00000513957 NEU4Q8WWR8 484 aaPredicted RBP7.05□□□□□ -1.28
NEDD4-210ENST00000513957 C11orf40Q8WZ69 217 aa7.05□□□□□ -1.28
NEDD4-210ENST00000513957 RAB1BQ9H0U4 201 aa7.05□□□□□ -1.28
NEDD4-210ENST00000513957 RERGLQ9H628 205 aa7.05□□□□□ -1.28
NEDD4-210ENST00000513957 TBCCD1Q9NVR7 557 aa7.05□□□□□ -1.28
NEDD4-210ENST00000513957 F8P00451 2351 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 TANC2Q9HCD6 1990 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 CELSR1Q9NYQ6 3014 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 ZNF469Q96JG9 3925 aaPredicted RBP7.04□□□□□ -1.28
NEDD4-210ENST00000513957 SURF4O15260 269 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 ABHD16AO95870 558 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 HLA-DQA2P01906 255 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 CD99P14209 185 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 SPI1P17947 270 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 CDKN1AP38936 164 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 HTR5AP47898 357 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 MECP2P51608 486 aaKnown RBP7.04□□□□□ -1.28
NEDD4-210ENST00000513957 SCAND1P57086 179 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 KLF3P57682 345 aaPredicted RBP7.04□□□□□ -1.28
NEDD4-210ENST00000513957 ZNF718Q3SXZ3 478 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 ELFN2Q5R3F8 820 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 SLC18B1Q6NT16 456 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 ZNF774Q6NX45 483 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 CFAP161Q6P656 301 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 CLEC2AQ6UVW9 174 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 UGT2A3Q6UWM9 527 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 ZBTB34Q8NCN2 500 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 OR5L1Q8NGL2 311 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 OR2AJ1Q8NGZ0 328 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 OR1F12Q8NHA8 337 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 AKR7LQ8NHP1 331 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 HTRA1Q92743 480 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 PLEKHA8Q96JA3 519 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 C4orf45Q96LM5 186 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 TSSK2Q96PF2 358 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 DOK1Q99704 481 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 RBM4BQ9BQ04 359 aaKnown RBP7.04□□□□□ -1.28
NEDD4-210ENST00000513957 CDADC1Q9BWV3 514 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 WDR12Q9GZL7 423 aaKnown RBP7.04□□□□□ -1.28
NEDD4-210ENST00000513957 DYNLRB1Q9NP97 96 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 CYSLTR2Q9NS75 346 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 KRT84Q9NSB2 600 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 DDX28Q9NUL7 540 aaKnown RBP7.04□□□□□ -1.28
NEDD4-210ENST00000513957 PRR13Q9NZ81 148 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 CYB5R1Q9UHQ9 305 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 LHFPL6Q9Y693 200 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 COMMD3-BMI1R4GMX3 469 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 ITPR3Q14573 2671 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 RTTNQ86VV8 2226 aa7.04□□□□□ -1.28
NEDD4-210ENST00000513957 VPS13CQ709C8 3753 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 LOC100509620A0A075B734 347 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 PRR23D1E9PI22 279 aaPredicted RBP7.03□□□□□ -1.28
NEDD4-210ENST00000513957 J3KRW8 73 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 GPRIN2O60269 458 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 GLCEO94923 617 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 IGHV3-13P01766 116 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 IGHV4-39P01824 125 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 TFP02787 698 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 LCKP06239 509 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 PRR23D2P0DMB1 279 aaPredicted RBP7.03□□□□□ -1.28
NEDD4-210ENST00000513957 CCNOP22674 350 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 IGFBP5P24593 272 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 GCH1P30793 250 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 GGT2P36268 569 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 ENTPD1P49961 510 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 DAPP51397 102 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 CRISP1P54107 249 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 MRPS11P82912 194 aaKnown RBP7.03□□□□□ -1.28
NEDD4-210ENST00000513957 PPP2R2BQ00005 443 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 GABPB1Q06547 395 aaPredicted RBP7.03□□□□□ -1.28
NEDD4-210ENST00000513957 GINS1Q14691 196 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 KPNB1Q14974 876 aaKnown RBP7.03□□□□□ -1.28
NEDD4-210ENST00000513957 CLEC12BQ2HXU8 276 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 PCGF3Q3KNV8 242 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 KRTAP27-1Q3LI81 207 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 MZT2BQ6NZ67 158 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 SHFQ7M4L6 423 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 HS3ST5Q8IZT8 346 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 PAQR4Q8N4S7 273 aaPredicted RBP7.03□□□□□ -1.28
NEDD4-210ENST00000513957 CYB561A3Q8NBI2 242 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 ZNF540Q8NDQ6 660 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 WFDC11Q8NEX6 87 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 OR1J1Q8NGS3 322 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 SYNPRQ8TBG9 265 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 SNX33Q8WV41 574 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 LRTOMTQ8WZ04 291 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 APOBEC3DQ96AK3 386 aaPredicted RBP7.03□□□□□ -1.28
NEDD4-210ENST00000513957 C18orf12Q96KH6 178 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 COX4I2Q96KJ9 171 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 Q96MF0 132 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 DIRC2Q96SL1 478 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 ATF6BQ99941 703 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 GABARAPL3Q9BY60 117 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 MRPL37Q9BZE1 423 aaKnown RBP7.03□□□□□ -1.28
NEDD4-210ENST00000513957 TOR3AQ9H497 397 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 MARCH7Q9H992 704 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 DLL4Q9NR61 685 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms