RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 G3V2T6 193 aa13.6□□□□□ -0.23
DDX41-214ENST00000512334 H3BSA7 217 aa13.6□□□□□ -0.23
DDX41-214ENST00000512334 TIMM8AO60220 97 aaPredicted RBP13.6□□□□□ -0.23
DDX41-214ENST00000512334 HMGN1P05114 100 aa13.6□□□□□ -0.23
DDX41-214ENST00000512334 SPARCP09486 303 aa13.6□□□□□ -0.23
DDX41-214ENST00000512334 LYNX1P0DP58 116 aa13.6□□□□□ -0.23
DDX41-214ENST00000512334 MAGEB1P43366 347 aa13.6□□□□□ -0.23
DDX41-214ENST00000512334 RGS6P49758 472 aa13.6□□□□□ -0.23
DDX41-214ENST00000512334 DAPP51397 102 aa13.6□□□□□ -0.23
DDX41-214ENST00000512334 GGTLC2Q14390 218 aa13.6□□□□□ -0.23
DDX41-214ENST00000512334 ZDHHC13Q8IUH4 622 aa13.6□□□□□ -0.23
DDX41-214ENST00000512334 ZNF511Q8NB15 262 aa13.6□□□□□ -0.23
DDX41-214ENST00000512334 GTF3AQ92664 365 aaKnown RBP13.6□□□□□ -0.23
DDX41-214ENST00000512334 DUS3LQ96G46 650 aaKnown RBP13.6□□□□□ -0.23
DDX41-214ENST00000512334 PLEKHA8Q96JA3 519 aa13.6□□□□□ -0.23
DDX41-214ENST00000512334 DCLRE1CQ96SD1 692 aaKnown RBP13.6□□□□□ -0.23
DDX41-214ENST00000512334 ATF6BQ99941 703 aa13.6□□□□□ -0.23
DDX41-214ENST00000512334 OR51V1Q9H2C8 321 aa13.6□□□□□ -0.23
DDX41-214ENST00000512334 POFUT1Q9H488 388 aa13.6□□□□□ -0.23
DDX41-214ENST00000512334 WDR76Q9H967 626 aa13.6□□□□□ -0.23
DDX41-214ENST00000512334 STARD10Q9Y365 291 aa13.6□□□□□ -0.23
DDX41-214ENST00000512334 COMMD3-BMI1R4GMX3 469 aa13.6□□□□□ -0.23
DDX41-214ENST00000512334 CHD3Q12873 2000 aaKnown RBP13.59□□□□□ -0.23
DDX41-214ENST00000512334 PRR23D1E9PI22 279 aaPredicted RBP13.59□□□□□ -0.23
DDX41-214ENST00000512334 ZNF593O00488 134 aaPredicted RBP13.59□□□□□ -0.23
DDX41-214ENST00000512334 TPD52L2O43399 206 aaKnown RBP13.59□□□□□ -0.23
DDX41-214ENST00000512334 SPRY3O43610 288 aa13.59□□□□□ -0.23
DDX41-214ENST00000512334 HPXP02790 462 aa13.59□□□□□ -0.23
DDX41-214ENST00000512334 PRR23D2P0DMB1 279 aaPredicted RBP13.59□□□□□ -0.23
DDX41-214ENST00000512334 USF1P22415 310 aaPredicted RBP13.59□□□□□ -0.23
DDX41-214ENST00000512334 NR4A2P43354 598 aa13.59□□□□□ -0.23
DDX41-214ENST00000512334 ENTPD1P49961 510 aa13.59□□□□□ -0.23
DDX41-214ENST00000512334 ZNF81P51508 661 aa13.59□□□□□ -0.23
DDX41-214ENST00000512334 BLVRAP53004 296 aa13.59□□□□□ -0.23
DDX41-214ENST00000512334 CCL8P80075 99 aa13.59□□□□□ -0.23
DDX41-214ENST00000512334 CDK5Q00535 292 aa13.59□□□□□ -0.23
DDX41-214ENST00000512334 ECH1Q13011 328 aa13.59□□□□□ -0.23
DDX41-214ENST00000512334 TMEM255AQ5JRV8 349 aa13.59□□□□□ -0.23
DDX41-214ENST00000512334 TMEM236Q5W0B7 351 aa13.59□□□□□ -0.23
DDX41-214ENST00000512334 FAHD1Q6P587 224 aa13.59□□□□□ -0.23
DDX41-214ENST00000512334 DCXRQ7Z4W1 244 aa13.59□□□□□ -0.23
DDX41-214ENST00000512334 ZNF786Q8N393 782 aa13.59□□□□□ -0.23
DDX41-214ENST00000512334 OR5L1Q8NGL2 311 aa13.59□□□□□ -0.23
DDX41-214ENST00000512334 MAP6Q96JE9 813 aa13.59□□□□□ -0.23
DDX41-214ENST00000512334 COG8Q96MW5 612 aa13.59□□□□□ -0.23
DDX41-214ENST00000512334 HCAR1Q9BXC0 346 aa13.59□□□□□ -0.23
DDX41-214ENST00000512334 BPESC1Q9GZL8 116 aa13.59□□□□□ -0.23
DDX41-214ENST00000512334 SEMA6AQ9H2E6 1030 aa13.59□□□□□ -0.23
DDX41-214ENST00000512334 A0A096LNT2 108 aa13.58□□□□□ -0.24
DDX41-214ENST00000512334 SURF4O15260 269 aa13.58□□□□□ -0.24
DDX41-214ENST00000512334 NCR1O76036 304 aa13.58□□□□□ -0.24
DDX41-214ENST00000512334 TUBG1P23258 451 aa13.58□□□□□ -0.24
DDX41-214ENST00000512334 CRISP1P54107 249 aa13.58□□□□□ -0.24
DDX41-214ENST00000512334 LOXL1Q08397 574 aaPredicted RBP13.58□□□□□ -0.24
DDX41-214ENST00000512334 PSG7Q13046 419 aa13.58□□□□□ -0.24
DDX41-214ENST00000512334 KPNB1Q14974 876 aaKnown RBP13.58□□□□□ -0.24
DDX41-214ENST00000512334 TSTQ16762 297 aaKnown RBP13.58□□□□□ -0.24
DDX41-214ENST00000512334 PCGF3Q3KNV8 242 aa13.58□□□□□ -0.24
DDX41-214ENST00000512334 KLHL12Q53G59 568 aa13.58□□□□□ -0.24
DDX41-214ENST00000512334 PLBD1Q6P4A8 553 aa13.58□□□□□ -0.24
DDX41-214ENST00000512334 ERI1Q8IV48 349 aaKnown RBP13.58□□□□□ -0.24
DDX41-214ENST00000512334 ZNF540Q8NDQ6 660 aa13.58□□□□□ -0.24
DDX41-214ENST00000512334 PYDC1Q8WXC3 89 aa13.58□□□□□ -0.24
DDX41-214ENST00000512334 RDH5Q92781 318 aa13.58□□□□□ -0.24
DDX41-214ENST00000512334 APOBEC3DQ96AK3 386 aaPredicted RBP13.58□□□□□ -0.24
DDX41-214ENST00000512334 PNRC2Q9NPJ4 139 aaKnown RBP13.58□□□□□ -0.24
DDX41-214ENST00000512334 TUBG2Q9NRH3 451 aa13.58□□□□□ -0.24
DDX41-214ENST00000512334 CYSLTR2Q9NS75 346 aa13.58□□□□□ -0.24
DDX41-214ENST00000512334 KRT84Q9NSB2 600 aa13.58□□□□□ -0.24
DDX41-214ENST00000512334 DECR2Q9NUI1 292 aa13.58□□□□□ -0.24
DDX41-214ENST00000512334 PTTG3PQ9NZH4 202 aa13.58□□□□□ -0.24
DDX41-214ENST00000512334 VWC2LB2RUY7 222 aa13.57□□□□□ -0.24
DDX41-214ENST00000512334 MITFO75030 526 aaPredicted RBP13.57□□□□□ -0.24
DDX41-214ENST00000512334 PSKH1P11801 424 aa13.57□□□□□ -0.24
DDX41-214ENST00000512334 COL8A2P25067 703 aa13.57□□□□□ -0.24
DDX41-214ENST00000512334 GSTT1P30711 240 aa13.57□□□□□ -0.24
DDX41-214ENST00000512334 LIPAP38571 399 aa13.57□□□□□ -0.24
DDX41-214ENST00000512334 MMP15P51511 669 aa13.57□□□□□ -0.24
DDX41-214ENST00000512334 RIPPLY3P57055 190 aa13.57□□□□□ -0.24
DDX41-214ENST00000512334 ACTR3P61158 418 aa13.57□□□□□ -0.24
DDX41-214ENST00000512334 TAF13Q15543 124 aa13.57□□□□□ -0.24
DDX41-214ENST00000512334 PARP8Q8N3A8 854 aa13.57□□□□□ -0.24
DDX41-214ENST00000512334 OR6N2Q8NGY6 317 aa13.57□□□□□ -0.24
DDX41-214ENST00000512334 PTP4A1Q93096 173 aa13.57□□□□□ -0.24
DDX41-214ENST00000512334 CMBLQ96DG6 245 aa13.57□□□□□ -0.24
DDX41-214ENST00000512334 CENPNQ96H22 339 aaPredicted RBP13.57□□□□□ -0.24
DDX41-214ENST00000512334 INTS14Q96SY0 518 aa13.57□□□□□ -0.24
DDX41-214ENST00000512334 COPS4Q9BT78 406 aa13.57□□□□□ -0.24
DDX41-214ENST00000512334 SLC25A19Q9HC21 320 aa13.57□□□□□ -0.24
DDX41-214ENST00000512334 CENPMQ9NSP4 180 aa13.57□□□□□ -0.24
DDX41-214ENST00000512334 TVP23BQ9NYZ1 205 aa13.57□□□□□ -0.24
DDX41-214ENST00000512334 PURGQ9UJV8 347 aaKnown RBP13.57□□□□□ -0.24
DDX41-214ENST00000512334 ZSCAN5BA6NJL1 495 aa13.56□□□□□ -0.24
DDX41-214ENST00000512334 SAC3D1A6NKF1 404 aa13.56□□□□□ -0.24
DDX41-214ENST00000512334 J3QW42 95 aa13.56□□□□□ -0.24
DDX41-214ENST00000512334 M0R135 149 aa13.56□□□□□ -0.24
DDX41-214ENST00000512334 CDC14BO60729 498 aa13.56□□□□□ -0.24
DDX41-214ENST00000512334 GLCEO94923 617 aa13.56□□□□□ -0.24
DDX41-214ENST00000512334 IGHV1-46P01743 117 aa13.56□□□□□ -0.24
DDX41-214ENST00000512334 LCATP04180 440 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms