RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 UBL3O95164 117 aa7.56□□□□□ -1.2
NUP54-211ENST00000512151 BAG2O95816 211 aa7.56□□□□□ -1.2
NUP54-211ENST00000512151 MT-ND1P03886 318 aa7.56□□□□□ -1.2
NUP54-211ENST00000512151 ADH4P08319 380 aa7.56□□□□□ -1.2
NUP54-211ENST00000512151 LORP23490 312 aaPredicted RBP7.56□□□□□ -1.2
NUP54-211ENST00000512151 CXCR1P25024 350 aa7.56□□□□□ -1.2
NUP54-211ENST00000512151 YAP1P46937 504 aaKnown RBP7.56□□□□□ -1.2
NUP54-211ENST00000512151 MAP2K6P52564 334 aa7.56□□□□□ -1.2
NUP54-211ENST00000512151 GNB2P62879 340 aa7.56□□□□□ -1.2
NUP54-211ENST00000512151 PMS2P3Q13401 168 aa7.56□□□□□ -1.2
NUP54-211ENST00000512151 CAMK2DQ13557 499 aa7.56□□□□□ -1.2
NUP54-211ENST00000512151 NRN1LQ496H8 165 aa7.56□□□□□ -1.2
NUP54-211ENST00000512151 MTX3Q5HYI7 312 aa7.56□□□□□ -1.2
NUP54-211ENST00000512151 ENTPD8Q5MY95 495 aa7.56□□□□□ -1.2
NUP54-211ENST00000512151 SPATA46Q5T0L3 261 aa7.56□□□□□ -1.2
NUP54-211ENST00000512151 DHRS7BQ6IAN0 325 aaPredicted RBP7.56□□□□□ -1.2
NUP54-211ENST00000512151 SLC35E4Q6ICL7 350 aa7.56□□□□□ -1.2
NUP54-211ENST00000512151 GDPGP1Q6ZNW5 385 aa7.56□□□□□ -1.2
NUP54-211ENST00000512151 FKBP9P1Q75LS8 142 aa7.56□□□□□ -1.2
NUP54-211ENST00000512151 SPATA24Q86W54 205 aa7.56□□□□□ -1.2
NUP54-211ENST00000512151 LDLRAD3Q86YD5 345 aa7.56□□□□□ -1.2
NUP54-211ENST00000512151 IPCEF1Q8WWN9 437 aaPredicted RBP7.56□□□□□ -1.2
NUP54-211ENST00000512151 LZICQ8WZA0 190 aa7.56□□□□□ -1.2
NUP54-211ENST00000512151 SLC25A36Q96CQ1 311 aa7.56□□□□□ -1.2
NUP54-211ENST00000512151 DUS3LQ96G46 650 aaKnown RBP7.56□□□□□ -1.2
NUP54-211ENST00000512151 OXGR1Q96P68 337 aa7.56□□□□□ -1.2
NUP54-211ENST00000512151 TBX15Q96SF7 602 aa7.56□□□□□ -1.2
NUP54-211ENST00000512151 MCHR1Q99705 422 aa7.56□□□□□ -1.2
NUP54-211ENST00000512151 OCSTAMPQ9BR26 566 aa7.56□□□□□ -1.2
NUP54-211ENST00000512151 NUDT16L1Q9BRJ7 211 aaKnown RBP7.56□□□□□ -1.2
NUP54-211ENST00000512151 EMC6Q9BV81 110 aa7.56□□□□□ -1.2
NUP54-211ENST00000512151 CDADC1Q9BWV3 514 aa7.56□□□□□ -1.2
NUP54-211ENST00000512151 EGLN1Q9GZT9 426 aa7.56□□□□□ -1.2
NUP54-211ENST00000512151 CACYBPQ9HB71 228 aaKnown RBP7.56□□□□□ -1.2
NUP54-211ENST00000512151 CDH20Q9HBT6 801 aa7.56□□□□□ -1.2
NUP54-211ENST00000512151 TMEM165Q9HC07 324 aa7.56□□□□□ -1.2
NUP54-211ENST00000512151 A4GNTQ9UNA3 340 aa7.56□□□□□ -1.2
NUP54-211ENST00000512151 POFUT2Q9Y2G5 429 aa7.56□□□□□ -1.2
NUP54-211ENST00000512151 CPSF4LA6NMK7 179 aaKnown RBP7.55□□□□□ -1.2
NUP54-211ENST00000512151 ADARB2-AS1A8MUL3 147 aa7.55□□□□□ -1.2
NUP54-211ENST00000512151 C22orf46C9J442 243 aa7.55□□□□□ -1.2
NUP54-211ENST00000512151 ZNF205O95201 554 aa7.55□□□□□ -1.2
NUP54-211ENST00000512151 HPRP00739 348 aa7.55□□□□□ -1.2
NUP54-211ENST00000512151 CD55P08174 381 aa7.55□□□□□ -1.2
NUP54-211ENST00000512151 UMPSP11172 480 aa7.55□□□□□ -1.2
NUP54-211ENST00000512151 HLA-DOBP13765 273 aa7.55□□□□□ -1.2
NUP54-211ENST00000512151 RGS8P57771 180 aaPredicted RBP7.55□□□□□ -1.2
NUP54-211ENST00000512151 BPIFB3P59826 476 aa7.55□□□□□ -1.2
NUP54-211ENST00000512151 PIN1Q13526 163 aaPredicted RBP7.55□□□□□ -1.2
NUP54-211ENST00000512151 BLMHQ13867 455 aa7.55□□□□□ -1.2
NUP54-211ENST00000512151 C1DQ13901 141 aaKnown RBP7.55□□□□□ -1.2
NUP54-211ENST00000512151 OR1Q1Q15612 314 aa7.55□□□□□ -1.2
NUP54-211ENST00000512151 NSUN5P1Q3KNT7 163 aa7.55□□□□□ -1.2
NUP54-211ENST00000512151 THEM4Q5T1C6 240 aa7.55□□□□□ -1.2
NUP54-211ENST00000512151 OGFRL1Q5TC84 451 aaPredicted RBP7.55□□□□□ -1.2
NUP54-211ENST00000512151 KLBQ86Z14 1044 aa7.55□□□□□ -1.2
NUP54-211ENST00000512151 ZNF440Q8IYI8 595 aa7.55□□□□□ -1.2
NUP54-211ENST00000512151 PQLC1Q8N2U9 271 aa7.55□□□□□ -1.2
NUP54-211ENST00000512151 CADM2Q8N3J6 435 aa7.55□□□□□ -1.2
NUP54-211ENST00000512151 LSMEM1Q8N8F7 131 aa7.55□□□□□ -1.2
NUP54-211ENST00000512151 PAPD5Q8NDF8 572 aaKnown RBP7.55□□□□□ -1.2
NUP54-211ENST00000512151 SLC35B4Q969S0 331 aa7.55□□□□□ -1.2
NUP54-211ENST00000512151 TXNDC15Q96J42 360 aa7.55□□□□□ -1.2
NUP54-211ENST00000512151 FOXB1Q99853 325 aa7.55□□□□□ -1.2
NUP54-211ENST00000512151 PCGF1Q9BSM1 259 aa7.55□□□□□ -1.2
NUP54-211ENST00000512151 ARMC7Q9H6L4 198 aa7.55□□□□□ -1.2
NUP54-211ENST00000512151 MSL2Q9HCI7 577 aa7.55□□□□□ -1.2
NUP54-211ENST00000512151 NDUFAF4Q9P032 175 aa7.55□□□□□ -1.2
NUP54-211ENST00000512151 RHCGQ9UBD6 479 aa7.55□□□□□ -1.2
NUP54-211ENST00000512151 SLC13A4Q9UKG4 626 aa7.55□□□□□ -1.2
NUP54-211ENST00000512151 U3KQK5 164 aa7.55□□□□□ -1.2
NUP54-211ENST00000512151 RYR1P21817 5038 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 A0A1B0GWA3 101 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 DHRS12A0PJE2 317 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 M0R082 166 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 FZD7O75084 574 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 SNAP29O95721 258 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 FABP3P05413 133 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 MMP9P14780 707 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 CFHR2P36980 270 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 MDH2P40926 338 aaKnown RBP7.54□□□□□ -1.2
NUP54-211ENST00000512151 WNT5AP41221 380 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 MAGEA2P43356 314 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 RPS5P46782 204 aaKnown RBP7.54□□□□□ -1.2
NUP54-211ENST00000512151 EFNB2P52799 333 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 CDH12P55289 794 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 TNFAIP6P98066 277 aaPredicted RBP7.54□□□□□ -1.2
NUP54-211ENST00000512151 EGR4Q05215 589 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 MOGQ16653 247 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 PGBD2Q6P3X8 592 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 IZUMO2Q6UXV1 221 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 NHLRC1Q6VVB1 395 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 LINC00114Q6XXX2 140 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 WDR88Q6ZMY6 472 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 C1orf122Q6ZSJ8 110 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 ZDHHC21Q8IVQ6 265 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 ZNF101Q8IZC7 436 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 KLHDC1Q8N7A1 406 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 CPEB3Q8NE35 698 aaKnown RBP7.54□□□□□ -1.2
NUP54-211ENST00000512151 OR1J1Q8NGS3 322 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms