RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 TUBG1P23258 451 aa10.94□□□□□ -0.66
POLR2J3-216ENST00000511773 LOXL3P58215 753 aa10.94□□□□□ -0.66
POLR2J3-216ENST00000511773 LCN6P62502 163 aa10.94□□□□□ -0.66
POLR2J3-216ENST00000511773 SCRN3Q0VDG4 424 aa10.94□□□□□ -0.66
POLR2J3-216ENST00000511773 DBPQ10586 325 aaPredicted RBP10.94□□□□□ -0.66
POLR2J3-216ENST00000511773 ALG10Q5BKT4 473 aa10.94□□□□□ -0.66
POLR2J3-216ENST00000511773 OTPQ5XKR4 325 aa10.94□□□□□ -0.66
POLR2J3-216ENST00000511773 FOXL2NBQ6ZUU3 175 aa10.94□□□□□ -0.66
POLR2J3-216ENST00000511773 LDLRAD3Q86YD5 345 aa10.94□□□□□ -0.66
POLR2J3-216ENST00000511773 NKAIN4Q8IVV8 208 aa10.94□□□□□ -0.66
POLR2J3-216ENST00000511773 C11orf44Q8N8P7 122 aa10.94□□□□□ -0.66
POLR2J3-216ENST00000511773 OR8G5Q8NG78 346 aa10.94□□□□□ -0.66
POLR2J3-216ENST00000511773 SPDL1Q96EA4 605 aa10.94□□□□□ -0.66
POLR2J3-216ENST00000511773 ZNF582Q96NG8 517 aaPredicted RBP10.94□□□□□ -0.66
POLR2J3-216ENST00000511773 CPPED1Q9BRF8 314 aaPredicted RBP10.94□□□□□ -0.66
POLR2J3-216ENST00000511773 TMEM109Q9BVC6 243 aa10.94□□□□□ -0.66
POLR2J3-216ENST00000511773 SEMA6AQ9H2E6 1030 aa10.94□□□□□ -0.66
POLR2J3-216ENST00000511773 DPAGT1Q9H3H5 408 aa10.94□□□□□ -0.66
POLR2J3-216ENST00000511773 TOR3AQ9H497 397 aa10.94□□□□□ -0.66
POLR2J3-216ENST00000511773 C16orf95Q9H693 158 aa10.94□□□□□ -0.66
POLR2J3-216ENST00000511773 POLE4Q9NR33 117 aa10.94□□□□□ -0.66
POLR2J3-216ENST00000511773 TUBG2Q9NRH3 451 aa10.94□□□□□ -0.66
POLR2J3-216ENST00000511773 CCDC167Q9P0B6 97 aa10.94□□□□□ -0.66
POLR2J3-216ENST00000511773 CTSZQ9UBR2 303 aa10.94□□□□□ -0.66
POLR2J3-216ENST00000511773 FAM96BQ9Y3D0 163 aa10.94□□□□□ -0.66
POLR2J3-216ENST00000511773 ELOVL7A1L3X0 281 aa10.93□□□□□ -0.66
POLR2J3-216ENST00000511773 NPIPB13A6NJU9 1138 aa10.93□□□□□ -0.66
POLR2J3-216ENST00000511773 NPIPB4C9JG80 1138 aa10.93□□□□□ -0.66
POLR2J3-216ENST00000511773 COX5BP10606 129 aa10.93□□□□□ -0.66
POLR2J3-216ENST00000511773 PRSS12P56730 875 aa10.93□□□□□ -0.66
POLR2J3-216ENST00000511773 TAS2R41P59536 307 aa10.93□□□□□ -0.66
POLR2J3-216ENST00000511773 RPL27P61353 136 aaKnown RBP10.93□□□□□ -0.66
POLR2J3-216ENST00000511773 ZNF181Q2M3W8 571 aa10.93□□□□□ -0.66
POLR2J3-216ENST00000511773 CD276Q5ZPR3 534 aa10.93□□□□□ -0.66
POLR2J3-216ENST00000511773 BLOC1S3Q6QNY0 202 aa10.93□□□□□ -0.66
POLR2J3-216ENST00000511773 Q6ZTK2 550 aa10.93□□□□□ -0.66
POLR2J3-216ENST00000511773 SYT9Q86SS6 491 aa10.93□□□□□ -0.66
POLR2J3-216ENST00000511773 FUNDC1Q8IVP5 155 aa10.93□□□□□ -0.66
POLR2J3-216ENST00000511773 BOLLQ8N9W6 283 aaKnown RBP10.93□□□□□ -0.66
POLR2J3-216ENST00000511773 LRTOMTQ8WZ04 291 aa10.93□□□□□ -0.66
POLR2J3-216ENST00000511773 COG8Q96MW5 612 aa10.93□□□□□ -0.66
POLR2J3-216ENST00000511773 PCDHAC1Q9H158 963 aa10.93□□□□□ -0.66
POLR2J3-216ENST00000511773 UFSP2Q9NUQ7 469 aa10.93□□□□□ -0.66
POLR2J3-216ENST00000511773 BTBD17A6NE02 478 aa10.92□□□□□ -0.66
POLR2J3-216ENST00000511773 SHOX2O60902 331 aaPredicted RBP10.92□□□□□ -0.66
POLR2J3-216ENST00000511773 FAM20BO75063 409 aa10.92□□□□□ -0.66
POLR2J3-216ENST00000511773 FSTL3O95633 263 aa10.92□□□□□ -0.66
POLR2J3-216ENST00000511773 LIPFP07098 398 aa10.92□□□□□ -0.66
POLR2J3-216ENST00000511773 DBHP09172 617 aa10.92□□□□□ -0.66
POLR2J3-216ENST00000511773 PSMB10P40306 273 aa10.92□□□□□ -0.66
POLR2J3-216ENST00000511773 NPY4RP50391 375 aa10.92□□□□□ -0.66
POLR2J3-216ENST00000511773 WDR4P57081 412 aaKnown RBP10.92□□□□□ -0.66
POLR2J3-216ENST00000511773 MTPNP58546 118 aa10.92□□□□□ -0.66
POLR2J3-216ENST00000511773 CTXN1P60606 82 aa10.92□□□□□ -0.66
POLR2J3-216ENST00000511773 ARF6P62330 175 aa10.92□□□□□ -0.66
POLR2J3-216ENST00000511773 OXLD1Q5BKU9 147 aa10.92□□□□□ -0.66
POLR2J3-216ENST00000511773 VAX1Q5SQQ9 334 aa10.92□□□□□ -0.66
POLR2J3-216ENST00000511773 SFRP4Q6FHJ7 346 aaPredicted RBP10.92□□□□□ -0.66
POLR2J3-216ENST00000511773 MICU2Q8IYU8 434 aa10.92□□□□□ -0.66
POLR2J3-216ENST00000511773 PIP4P2Q8N4L2 257 aa10.92□□□□□ -0.66
POLR2J3-216ENST00000511773 PNLDC1Q8NA58 520 aaKnown RBP10.92□□□□□ -0.66
POLR2J3-216ENST00000511773 OR11L1Q8NGX0 322 aa10.92□□□□□ -0.66
POLR2J3-216ENST00000511773 SLC26A7Q8TE54 656 aa10.92□□□□□ -0.66
POLR2J3-216ENST00000511773 AENQ8WTP8 325 aaKnown RBP10.92□□□□□ -0.66
POLR2J3-216ENST00000511773 TMEM239Q8WW34 195 aa10.92□□□□□ -0.66
POLR2J3-216ENST00000511773 SGCDQ92629 289 aa10.92□□□□□ -0.66
POLR2J3-216ENST00000511773 TAMM41Q96BW9 452 aa10.92□□□□□ -0.66
POLR2J3-216ENST00000511773 SIRPDQ9H106 197 aa10.92□□□□□ -0.66
POLR2J3-216ENST00000511773 RASSF4Q9H2L5 321 aa10.92□□□□□ -0.66
POLR2J3-216ENST00000511773 WDR76Q9H967 626 aa10.92□□□□□ -0.66
POLR2J3-216ENST00000511773 SMURF1Q9HCE7 757 aa10.92□□□□□ -0.66
POLR2J3-216ENST00000511773 ERVK-18Q9QC07 812 aa10.92□□□□□ -0.66
POLR2J3-216ENST00000511773 VPREB3Q9UKI3 123 aa10.92□□□□□ -0.66
POLR2J3-216ENST00000511773 GMEB1Q9Y692 573 aa10.92□□□□□ -0.66
POLR2J3-216ENST00000511773 ANKRD61A6NGH8 418 aa10.91□□□□□ -0.66
POLR2J3-216ENST00000511773 FBP2O00757 339 aa10.91□□□□□ -0.66
POLR2J3-216ENST00000511773 ADAM20O43506 726 aa10.91□□□□□ -0.66
POLR2J3-216ENST00000511773 TSPAN19P0C672 248 aa10.91□□□□□ -0.66
POLR2J3-216ENST00000511773 TNFRSF1BP20333 461 aa10.91□□□□□ -0.66
POLR2J3-216ENST00000511773 FUT4P22083 530 aa10.91□□□□□ -0.66
POLR2J3-216ENST00000511773 FPR3P25089 353 aa10.91□□□□□ -0.66
POLR2J3-216ENST00000511773 RBM34P42696 430 aaKnown RBP10.91□□□□□ -0.66
POLR2J3-216ENST00000511773 PRB3Q04118 309 aaPredicted RBP10.91□□□□□ -0.66
POLR2J3-216ENST00000511773 SELPLGQ14242 412 aa10.91□□□□□ -0.66
POLR2J3-216ENST00000511773 HERPUD1Q15011 391 aa10.91□□□□□ -0.66
POLR2J3-216ENST00000511773 PRAMEF6Q5VXH4 476 aa10.91□□□□□ -0.66
POLR2J3-216ENST00000511773 FBXW12Q6X9E4 464 aa10.91□□□□□ -0.66
POLR2J3-216ENST00000511773 FNDC8Q8TC99 324 aa10.91□□□□□ -0.66
POLR2J3-216ENST00000511773 ITPKCQ96DU7 683 aa10.91□□□□□ -0.66
POLR2J3-216ENST00000511773 PPA2Q9H2U2 334 aa10.91□□□□□ -0.66
POLR2J3-216ENST00000511773 TMEM100Q9NV29 134 aa10.91□□□□□ -0.66
POLR2J3-216ENST00000511773 AURKAIP1Q9NWT8 199 aaPredicted RBP10.91□□□□□ -0.66
POLR2J3-216ENST00000511773 HIF3AQ9Y2N7 669 aa10.91□□□□□ -0.66
POLR2J3-216ENST00000511773 SIGLEC9Q9Y336 463 aa10.91□□□□□ -0.66
POLR2J3-216ENST00000511773 SH3GLB1Q9Y371 365 aa10.91□□□□□ -0.66
POLR2J3-216ENST00000511773 MED31Q9Y3C7 131 aa10.91□□□□□ -0.66
POLR2J3-216ENST00000511773 OR6C6A6NF89 314 aa10.9□□□□□ -0.66
POLR2J3-216ENST00000511773 A6NIZ1 184 aa10.9□□□□□ -0.66
POLR2J3-216ENST00000511773 OR10H3O60404 316 aa10.9□□□□□ -0.66
POLR2J3-216ENST00000511773 TSPAN9O75954 239 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms