RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 FARSBQ9NSD9 589 aaKnown RBP2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 PRR34Q9NV39 138 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 ZNHIT6Q9NWK9 470 aaKnown RBP2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 ADAM22Q9P0K1 906 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 MBD2Q9UBB5 411 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 RABL2AQ9UBK7 228 aaPredicted RBP2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 IL20RAQ9UHF4 553 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 ZNF107Q9UII5 783 aaPredicted RBP2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 PURGQ9UJV8 347 aaKnown RBP2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 FREM3P0C091 2139 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 ALMS1Q8TCU4 4167 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 TRAV9-2A0A087WT02 112 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 A0A0G2JMP0 313 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 A0A0J9YVX5 310 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 A0A0J9YYE9 177 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 C1orf232A0A0U1RR37 186 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 A0A0X1KG70 313 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 NPIPA7E9PJI5 369 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 J3QLI3 93 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 SGK494L7N484 410 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 PHOX2AO14813 284 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 MAGEB3O15480 346 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 MFN2O95140 757 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 CTDNEP1O95476 244 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 TRBC1P01850 177 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 IFNW1P05000 195 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 NPIPA8P0DM63 369 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 TNNI3P19429 210 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 GDF1P27539 372 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 GCKP35557 465 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 HSPA9P38646 679 aaKnown RBP2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 OR4D2P58180 307 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 HERVK_113P63132 956 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 ERVK-8P63133 956 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 ZNF85Q03923 595 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 GABPB1Q06547 395 aaPredicted RBP2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 BSPH1Q075Z2 132 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 FUT7Q11130 342 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 CUL2Q13617 745 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 CRMP1Q14194 572 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 CAMK4Q16566 473 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 Q1RN00 199 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 EXOC3L2Q2M3D2 409 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 PARP6Q2NL67 630 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 CNPY1Q3B7I2 92 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 SEL1L2Q5TEA6 688 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 BAIAP2L2Q6UXY1 529 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 NT5DC3Q86UY8 548 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 LRRC25Q8N386 305 aaPredicted RBP2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 TRAM1L1Q8N609 369 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 MINDY2Q8NBR6 621 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 FBXL13Q8NEE6 735 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 OR4F17Q8NGA8 305 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 OR4M2Q8NGB6 313 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 PAQR8Q8TEZ7 354 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 PIH1D2Q8WWB5 315 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 ISOC1Q96CN7 298 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 TUBGCP3Q96CW5 907 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 PSKH2Q96QS6 385 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 OR4F4Q96R69 305 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 DHRS9Q9BPW9 319 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 TBCDQ9BTW9 1192 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 ERVK-6Q9BXR3 956 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 LRRC40Q9H9A6 602 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 SNX6Q9UNH7 406 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 NEU3Q9UQ49 428 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 MGAT4BQ9UQ53 548 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 SMC3Q9UQE7 1217 aa2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 YARS2Q9Y2Z4 477 aaKnown RBP2.63□□□□□ -1.99
TOPBP1-208ENST00000511439 TRBV11-1A0A0K0K1C0 115 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 LRIT2A6NDA9 550 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 MGAT4DA6NG13 374 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 SAGE2PA6NJ88 616 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 OR2AG2A6NM03 316 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 A8MU10 97 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 H3BTX0 84 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 LGALS8O00214 317 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 MED7O43513 233 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 OR2J2O76002 312 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 STAMBPO95630 424 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 RRASP10301 218 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 HTR2AP28223 471 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 PRDX2P32119 198 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 DEKP35659 375 aaKnown RBP2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 HMGCLP35914 325 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 HSF2Q03933 536 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 BNIP1Q12981 228 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 CHIT1Q13231 466 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 PPP1R3AQ16821 1122 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 TPD52L1Q16890 204 aaPredicted RBP2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 MICAQ29983 383 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 MAJINQ3KP22 176 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 SLC25A52Q3SY17 297 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 CFAP157Q5JU67 520 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 C1orf220Q5T0J3 134 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 ZNF544Q6NX49 715 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 ENPP6Q6UWR7 440 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 CES3Q6UWW8 571 aa2.62□□□□□ -1.99
TOPBP1-208ENST00000511439 STAC2Q6ZMT1 411 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms